Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A788:A751
Extra
PDB:
ATOM 1 O3' A A 787 -48.104 -49.650 22.741 1.00 0.01 O
ATOM 2 P A A 788 -49.035 -50.775 22.086 1.00 0.01 P
ATOM 3 OP1 A A 788 -50.412 -50.276 22.069 1.00 0.01 O
ATOM 4 OP2 A A 788 -48.756 -52.025 22.800 1.00 0.01 O
ATOM 5 O5' A A 788 -48.464 -50.862 20.619 1.00 0.01 O
ATOM 6 C5' A A 788 -48.556 -49.767 19.743 1.00 0.01 C
ATOM 7 C4' A A 788 -49.318 -50.136 18.510 1.00 0.01 C
ATOM 8 O4' A A 788 -48.535 -51.066 17.720 1.00 0.01 O
ATOM 9 C3' A A 788 -50.649 -50.822 18.762 1.00 0.01 C
ATOM 10 O3' A A 788 -51.565 -50.436 17.751 1.00 0.01 O
ATOM 11 C2' A A 788 -50.311 -52.296 18.612 1.00 0.01 C
ATOM 12 O2' A A 788 -51.411 -53.120 18.288 1.00 0.01 O
ATOM 13 C1' A A 788 -49.280 -52.246 17.495 1.00 0.01 C
ATOM 14 N9 A A 788 -48.347 -53.370 17.478 1.00 0.01 N
ATOM 15 C8 A A 788 -48.157 -54.310 18.434 1.00 0.01 C
ATOM 16 N7 A A 788 -47.249 -55.176 18.137 1.00 0.01 N
ATOM 17 C5 A A 788 -46.811 -54.777 16.908 1.00 0.01 C
ATOM 18 C6 A A 788 -45.840 -55.319 16.089 1.00 0.01 C
ATOM 19 N6 A A 788 -45.147 -56.406 16.422 1.00 0.01 N
ATOM 20 N1 A A 788 -45.609 -54.708 14.925 1.00 0.01 N
ATOM 21 C2 A A 788 -46.336 -53.625 14.615 1.00 0.01 C
ATOM 22 N3 A A 788 -47.279 -53.021 15.315 1.00 0.01 N
ATOM 23 C4 A A 788 -47.467 -53.669 16.478 1.00 0.01 C
ATOM 24 P U A 789 -52.660 -49.326 18.066 1.00 11.19 P
ATOM 25 OP1 U A 789 -53.516 -49.227 16.874 1.00 11.19 O
ATOM 26 OP2 U A 789 -51.952 -48.145 18.507 1.00 11.19 O
ATOM 27 O5' U A 789 -53.441 -49.959 19.307 1.00 11.19 O
TER
ATOM 1 O3' A B 750 -47.306 -53.420 9.934 1.00 0.01 O
ATOM 2 P A B 751 -46.432 -52.257 10.591 1.00 0.01 P
ATOM 3 OP1 A B 751 -45.112 -52.834 10.952 1.00 0.01 O
ATOM 4 OP2 A B 751 -47.271 -51.649 11.672 1.00 0.01 O
ATOM 5 O5' A B 751 -46.266 -51.232 9.421 1.00 0.01 O
ATOM 6 C5' A B 751 -46.128 -51.668 8.107 1.00 0.01 C
ATOM 7 C4' A B 751 -46.756 -50.697 7.161 1.00 0.01 C
ATOM 8 O4' A B 751 -48.198 -50.879 7.148 1.00 0.01 O
ATOM 9 C3' A B 751 -46.533 -49.196 7.466 1.00 0.01 C
ATOM 10 O3' A B 751 -46.260 -48.539 6.234 1.00 0.01 O
ATOM 11 C2' A B 751 -47.912 -48.760 7.961 1.00 0.01 C
ATOM 12 O2' A B 751 -48.177 -47.384 7.826 1.00 0.01 O
ATOM 13 C1' A B 751 -48.739 -49.608 7.017 1.00 0.01 C
ATOM 14 N9 A B 751 -50.198 -49.622 7.171 1.00 0.01 N
ATOM 15 C8 A B 751 -50.867 -49.238 6.016 1.00 0.01 C
ATOM 16 N7 A B 751 -52.162 -49.183 6.030 1.00 0.01 N
ATOM 17 C5 A B 751 -52.340 -49.597 7.289 1.00 0.01 C
ATOM 18 C6 A B 751 -53.559 -49.728 7.819 1.00 0.01 C
ATOM 19 N6 A B 751 -54.552 -49.449 7.017 1.00 0.01 N
ATOM 20 N1 A B 751 -53.632 -50.129 9.102 1.00 0.01 N
ATOM 21 C2 A B 751 -52.447 -50.364 9.725 1.00 0.01 C
ATOM 22 N3 A B 751 -51.173 -50.268 9.272 1.00 0.01 N
ATOM 23 C4 A B 751 -51.196 -49.877 8.025 1.00 0.01 C
ATOM 24 P A B 752 -45.405 -47.184 6.169 1.00 0.01 P
ATOM 25 OP1 A B 752 -45.037 -46.824 7.540 1.00 0.01 O
ATOM 26 OP2 A B 752 -46.177 -46.230 5.381 1.00 0.01 O
ATOM 27 O5' A B 752 -44.118 -47.620 5.357 1.00 0.01 O
TER
ATOM 2 P A A 788 -49.035 -50.775 22.086 1.00 0.01 P
ATOM 3 OP1 A A 788 -50.412 -50.276 22.069 1.00 0.01 O
ATOM 4 OP2 A A 788 -48.756 -52.025 22.800 1.00 0.01 O
ATOM 5 O5' A A 788 -48.464 -50.862 20.619 1.00 0.01 O
ATOM 6 C5' A A 788 -48.556 -49.767 19.743 1.00 0.01 C
ATOM 7 C4' A A 788 -49.318 -50.136 18.510 1.00 0.01 C
ATOM 8 O4' A A 788 -48.535 -51.066 17.720 1.00 0.01 O
ATOM 9 C3' A A 788 -50.649 -50.822 18.762 1.00 0.01 C
ATOM 10 O3' A A 788 -51.565 -50.436 17.751 1.00 0.01 O
ATOM 11 C2' A A 788 -50.311 -52.296 18.612 1.00 0.01 C
ATOM 12 O2' A A 788 -51.411 -53.120 18.288 1.00 0.01 O
ATOM 13 C1' A A 788 -49.280 -52.246 17.495 1.00 0.01 C
ATOM 14 N9 A A 788 -48.347 -53.370 17.478 1.00 0.01 N
ATOM 15 C8 A A 788 -48.157 -54.310 18.434 1.00 0.01 C
ATOM 16 N7 A A 788 -47.249 -55.176 18.137 1.00 0.01 N
ATOM 17 C5 A A 788 -46.811 -54.777 16.908 1.00 0.01 C
ATOM 18 C6 A A 788 -45.840 -55.319 16.089 1.00 0.01 C
ATOM 19 N6 A A 788 -45.147 -56.406 16.422 1.00 0.01 N
ATOM 20 N1 A A 788 -45.609 -54.708 14.925 1.00 0.01 N
ATOM 21 C2 A A 788 -46.336 -53.625 14.615 1.00 0.01 C
ATOM 22 N3 A A 788 -47.279 -53.021 15.315 1.00 0.01 N
ATOM 23 C4 A A 788 -47.467 -53.669 16.478 1.00 0.01 C
ATOM 24 P U A 789 -52.660 -49.326 18.066 1.00 11.19 P
ATOM 25 OP1 U A 789 -53.516 -49.227 16.874 1.00 11.19 O
ATOM 26 OP2 U A 789 -51.952 -48.145 18.507 1.00 11.19 O
ATOM 27 O5' U A 789 -53.441 -49.959 19.307 1.00 11.19 O
TER
ATOM 1 O3' A B 750 -47.306 -53.420 9.934 1.00 0.01 O
ATOM 2 P A B 751 -46.432 -52.257 10.591 1.00 0.01 P
ATOM 3 OP1 A B 751 -45.112 -52.834 10.952 1.00 0.01 O
ATOM 4 OP2 A B 751 -47.271 -51.649 11.672 1.00 0.01 O
ATOM 5 O5' A B 751 -46.266 -51.232 9.421 1.00 0.01 O
ATOM 6 C5' A B 751 -46.128 -51.668 8.107 1.00 0.01 C
ATOM 7 C4' A B 751 -46.756 -50.697 7.161 1.00 0.01 C
ATOM 8 O4' A B 751 -48.198 -50.879 7.148 1.00 0.01 O
ATOM 9 C3' A B 751 -46.533 -49.196 7.466 1.00 0.01 C
ATOM 10 O3' A B 751 -46.260 -48.539 6.234 1.00 0.01 O
ATOM 11 C2' A B 751 -47.912 -48.760 7.961 1.00 0.01 C
ATOM 12 O2' A B 751 -48.177 -47.384 7.826 1.00 0.01 O
ATOM 13 C1' A B 751 -48.739 -49.608 7.017 1.00 0.01 C
ATOM 14 N9 A B 751 -50.198 -49.622 7.171 1.00 0.01 N
ATOM 15 C8 A B 751 -50.867 -49.238 6.016 1.00 0.01 C
ATOM 16 N7 A B 751 -52.162 -49.183 6.030 1.00 0.01 N
ATOM 17 C5 A B 751 -52.340 -49.597 7.289 1.00 0.01 C
ATOM 18 C6 A B 751 -53.559 -49.728 7.819 1.00 0.01 C
ATOM 19 N6 A B 751 -54.552 -49.449 7.017 1.00 0.01 N
ATOM 20 N1 A B 751 -53.632 -50.129 9.102 1.00 0.01 N
ATOM 21 C2 A B 751 -52.447 -50.364 9.725 1.00 0.01 C
ATOM 22 N3 A B 751 -51.173 -50.268 9.272 1.00 0.01 N
ATOM 23 C4 A B 751 -51.196 -49.877 8.025 1.00 0.01 C
ATOM 24 P A B 752 -45.405 -47.184 6.169 1.00 0.01 P
ATOM 25 OP1 A B 752 -45.037 -46.824 7.540 1.00 0.01 O
ATOM 26 OP2 A B 752 -46.177 -46.230 5.381 1.00 0.01 O
ATOM 27 O5' A B 752 -44.118 -47.620 5.357 1.00 0.01 O
TER
Atoms:
OP1: (-50.412,-50.276,22.069)
OP2: (-48.756,-52.025,22.800)
C3': (-50.649,-50.822,18.762)
C1': (-49.280,-52.246,17.495)
C5': (-48.556,-49.767,19.743)
O4': (-48.535,-51.066,17.720)
C8: (-48.157,-54.310,18.434)
O2': (-51.411,-53.120,18.288)
C6: (-45.840,-55.319,16.089)
C5: (-46.811,-54.777,16.908)
C4: (-47.467,-53.669,16.478)
P: (-49.035,-50.775,22.086)
C4': (-49.318,-50.136,18.510)
C2': (-50.311,-52.296,18.612)
C2: (-46.336,-53.625,14.615)
N1: (-45.609,-54.708,14.925)
N3: (-47.279,-53.021,15.315)
N6: (-45.147,-56.406,16.422)
N7: (-47.249,-55.176,18.137)
N9: (-48.347,-53.370,17.478)
O5': (-48.464,-50.862,20.619)
O3': (-51.565,-50.436,17.751)
OP2: (-48.756,-52.025,22.800)
C3': (-50.649,-50.822,18.762)
C1': (-49.280,-52.246,17.495)
C5': (-48.556,-49.767,19.743)
O4': (-48.535,-51.066,17.720)
C8: (-48.157,-54.310,18.434)
O2': (-51.411,-53.120,18.288)
C6: (-45.840,-55.319,16.089)
C5: (-46.811,-54.777,16.908)
C4: (-47.467,-53.669,16.478)
P: (-49.035,-50.775,22.086)
C4': (-49.318,-50.136,18.510)
C2': (-50.311,-52.296,18.612)
C2: (-46.336,-53.625,14.615)
N1: (-45.609,-54.708,14.925)
N3: (-47.279,-53.021,15.315)
N6: (-45.147,-56.406,16.422)
N7: (-47.249,-55.176,18.137)
N9: (-48.347,-53.370,17.478)
O5': (-48.464,-50.862,20.619)
O3': (-51.565,-50.436,17.751)
OP1: (-45.112,-52.834,10.952)
OP2: (-47.271,-51.649,11.672)
C3': (-46.533,-49.196,7.466)
C1': (-48.739,-49.608,7.017)
C5': (-46.128,-51.668,8.107)
O4': (-48.198,-50.879,7.148)
C8: (-50.867,-49.238,6.016)
O2': (-48.177,-47.384,7.826)
C6: (-53.559,-49.728,7.819)
C5: (-52.340,-49.597,7.289)
C4: (-51.196,-49.877,8.025)
P: (-46.432,-52.257,10.591)
C4': (-46.756,-50.697,7.161)
C2': (-47.912,-48.760,7.961)
C2: (-52.447,-50.364,9.725)
N1: (-53.632,-50.129,9.102)
N3: (-51.173,-50.268,9.272)
N6: (-54.552,-49.449,7.017)
N7: (-52.162,-49.183,6.030)
N9: (-50.198,-49.622,7.171)
O5': (-46.266,-51.232,9.421)
O3': (-46.260,-48.539,6.234)
OP2: (-47.271,-51.649,11.672)
C3': (-46.533,-49.196,7.466)
C1': (-48.739,-49.608,7.017)
C5': (-46.128,-51.668,8.107)
O4': (-48.198,-50.879,7.148)
C8: (-50.867,-49.238,6.016)
O2': (-48.177,-47.384,7.826)
C6: (-53.559,-49.728,7.819)
C5: (-52.340,-49.597,7.289)
C4: (-51.196,-49.877,8.025)
P: (-46.432,-52.257,10.591)
C4': (-46.756,-50.697,7.161)
C2': (-47.912,-48.760,7.961)
C2: (-52.447,-50.364,9.725)
N1: (-53.632,-50.129,9.102)
N3: (-51.173,-50.268,9.272)
N6: (-54.552,-49.449,7.017)
N7: (-52.162,-49.183,6.030)
N9: (-50.198,-49.622,7.171)
O5': (-46.266,-51.232,9.421)
O3': (-46.260,-48.539,6.234)
Image (generated by PyMOL):