Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2961:21758
Extra
PDB:
ATOM 1 O3' A A 960 -40.769 -3.454 104.941 1.00 67.87 O
ATOM 2 P A A 961 -39.201 -3.229 105.224 1.00 64.12 P
ATOM 3 OP1 A A 961 -38.654 -4.548 105.653 1.00 65.13 O
ATOM 4 OP2 A A 961 -39.078 -2.061 106.151 1.00 63.88 O
ATOM 5 O5' A A 961 -38.638 -2.838 103.789 1.00 63.12 O
ATOM 6 C5' A A 961 -38.313 -3.832 102.846 1.00 63.25 C
ATOM 7 C4' A A 961 -38.311 -3.263 101.472 1.00 62.27 C
ATOM 8 O4' A A 961 -39.302 -2.212 101.399 1.00 61.68 O
ATOM 9 C3' A A 961 -37.027 -2.579 101.044 1.00 61.58 C
ATOM 10 O3' A A 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 11 C2' A A 961 -37.522 -1.634 99.948 1.00 60.58 C
ATOM 12 O2' A A 961 -37.794 -2.351 98.756 1.00 60.54 O
ATOM 13 C1' A A 961 -38.866 -1.193 100.523 1.00 60.67 C
ATOM 14 N9 A A 961 -38.779 0.089 101.272 1.00 60.25 N
ATOM 15 C8 A A 961 -38.893 0.265 102.633 1.00 60.78 C
ATOM 16 N7 A A 961 -38.783 1.510 103.038 1.00 60.27 N
ATOM 17 C5 A A 961 -38.596 2.222 101.877 1.00 59.35 C
ATOM 18 C6 A A 961 -38.414 3.591 101.660 1.00 58.53 C
ATOM 19 N6 A A 961 -38.403 4.512 102.618 1.00 58.50 N
ATOM 20 N1 A A 961 -38.251 4.003 100.394 1.00 57.77 N
ATOM 21 C2 A A 961 -38.282 3.055 99.439 1.00 57.86 C
ATOM 22 N3 A A 961 -38.441 1.732 99.505 1.00 58.59 N
ATOM 23 C4 A A 961 -38.600 1.370 100.781 1.00 59.32 C
ATOM 24 P G A 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 25 OP1 G A 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 26 OP2 G A 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 27 O5' G A 962 -33.999 -2.056 100.836 1.00 63.66 O
TER
ATOM 1 O3' U B1757 -38.123 2.146 95.806 1.00 61.47 O
ATOM 2 P A B1758 -37.027 2.178 94.634 1.00 59.18 P
ATOM 3 OP1 A B1758 -36.010 3.195 95.008 1.00 58.79 O
ATOM 4 OP2 A B1758 -37.780 2.334 93.350 1.00 59.12 O
ATOM 5 O5' A B1758 -36.373 0.732 94.733 1.00 59.48 O
ATOM 6 C5' A B1758 -35.462 0.435 95.785 1.00 59.55 C
ATOM 7 C4' A B1758 -35.066 -1.018 95.805 1.00 59.92 C
ATOM 8 O4' A B1758 -36.231 -1.840 96.059 1.00 60.40 O
ATOM 9 C3' A B1758 -34.534 -1.595 94.515 1.00 59.85 C
ATOM 10 O3' A B1758 -33.213 -1.218 94.221 1.00 59.50 O
ATOM 11 C2' A B1758 -34.704 -3.088 94.747 1.00 60.38 C
ATOM 12 O2' A B1758 -33.712 -3.564 95.643 1.00 60.49 O
ATOM 13 C1' A B1758 -36.048 -3.116 95.468 1.00 60.71 C
ATOM 14 N9 A B1758 -37.182 -3.422 94.557 1.00 60.90 N
ATOM 15 C8 A B1758 -38.102 -2.635 93.885 1.00 60.73 C
ATOM 16 N7 A B1758 -38.982 -3.321 93.159 1.00 61.05 N
ATOM 17 C5 A B1758 -38.632 -4.651 93.383 1.00 61.46 C
ATOM 18 C6 A B1758 -39.144 -5.892 92.936 1.00 61.97 C
ATOM 19 N6 A B1758 -40.171 -6.049 92.113 1.00 62.16 N
ATOM 20 N1 A B1758 -38.566 -7.024 93.345 1.00 62.32 N
ATOM 21 C2 A B1758 -37.519 -6.916 94.163 1.00 62.17 C
ATOM 22 N3 A B1758 -36.924 -5.825 94.656 1.00 61.71 N
ATOM 23 C4 A B1758 -37.534 -4.708 94.225 1.00 61.37 C
ATOM 24 P G B1759 -32.708 -1.260 92.701 1.00 62.74 P
ATOM 25 OP1 G B1759 -31.461 -0.440 92.616 1.00 62.32 O
ATOM 26 OP2 G B1759 -33.853 -0.895 91.861 1.00 62.72 O
ATOM 27 O5' G B1759 -32.357 -2.795 92.491 1.00 63.14 O
TER
ATOM 2 P A A 961 -39.201 -3.229 105.224 1.00 64.12 P
ATOM 3 OP1 A A 961 -38.654 -4.548 105.653 1.00 65.13 O
ATOM 4 OP2 A A 961 -39.078 -2.061 106.151 1.00 63.88 O
ATOM 5 O5' A A 961 -38.638 -2.838 103.789 1.00 63.12 O
ATOM 6 C5' A A 961 -38.313 -3.832 102.846 1.00 63.25 C
ATOM 7 C4' A A 961 -38.311 -3.263 101.472 1.00 62.27 C
ATOM 8 O4' A A 961 -39.302 -2.212 101.399 1.00 61.68 O
ATOM 9 C3' A A 961 -37.027 -2.579 101.044 1.00 61.58 C
ATOM 10 O3' A A 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 11 C2' A A 961 -37.522 -1.634 99.948 1.00 60.58 C
ATOM 12 O2' A A 961 -37.794 -2.351 98.756 1.00 60.54 O
ATOM 13 C1' A A 961 -38.866 -1.193 100.523 1.00 60.67 C
ATOM 14 N9 A A 961 -38.779 0.089 101.272 1.00 60.25 N
ATOM 15 C8 A A 961 -38.893 0.265 102.633 1.00 60.78 C
ATOM 16 N7 A A 961 -38.783 1.510 103.038 1.00 60.27 N
ATOM 17 C5 A A 961 -38.596 2.222 101.877 1.00 59.35 C
ATOM 18 C6 A A 961 -38.414 3.591 101.660 1.00 58.53 C
ATOM 19 N6 A A 961 -38.403 4.512 102.618 1.00 58.50 N
ATOM 20 N1 A A 961 -38.251 4.003 100.394 1.00 57.77 N
ATOM 21 C2 A A 961 -38.282 3.055 99.439 1.00 57.86 C
ATOM 22 N3 A A 961 -38.441 1.732 99.505 1.00 58.59 N
ATOM 23 C4 A A 961 -38.600 1.370 100.781 1.00 59.32 C
ATOM 24 P G A 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 25 OP1 G A 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 26 OP2 G A 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 27 O5' G A 962 -33.999 -2.056 100.836 1.00 63.66 O
TER
ATOM 1 O3' U B1757 -38.123 2.146 95.806 1.00 61.47 O
ATOM 2 P A B1758 -37.027 2.178 94.634 1.00 59.18 P
ATOM 3 OP1 A B1758 -36.010 3.195 95.008 1.00 58.79 O
ATOM 4 OP2 A B1758 -37.780 2.334 93.350 1.00 59.12 O
ATOM 5 O5' A B1758 -36.373 0.732 94.733 1.00 59.48 O
ATOM 6 C5' A B1758 -35.462 0.435 95.785 1.00 59.55 C
ATOM 7 C4' A B1758 -35.066 -1.018 95.805 1.00 59.92 C
ATOM 8 O4' A B1758 -36.231 -1.840 96.059 1.00 60.40 O
ATOM 9 C3' A B1758 -34.534 -1.595 94.515 1.00 59.85 C
ATOM 10 O3' A B1758 -33.213 -1.218 94.221 1.00 59.50 O
ATOM 11 C2' A B1758 -34.704 -3.088 94.747 1.00 60.38 C
ATOM 12 O2' A B1758 -33.712 -3.564 95.643 1.00 60.49 O
ATOM 13 C1' A B1758 -36.048 -3.116 95.468 1.00 60.71 C
ATOM 14 N9 A B1758 -37.182 -3.422 94.557 1.00 60.90 N
ATOM 15 C8 A B1758 -38.102 -2.635 93.885 1.00 60.73 C
ATOM 16 N7 A B1758 -38.982 -3.321 93.159 1.00 61.05 N
ATOM 17 C5 A B1758 -38.632 -4.651 93.383 1.00 61.46 C
ATOM 18 C6 A B1758 -39.144 -5.892 92.936 1.00 61.97 C
ATOM 19 N6 A B1758 -40.171 -6.049 92.113 1.00 62.16 N
ATOM 20 N1 A B1758 -38.566 -7.024 93.345 1.00 62.32 N
ATOM 21 C2 A B1758 -37.519 -6.916 94.163 1.00 62.17 C
ATOM 22 N3 A B1758 -36.924 -5.825 94.656 1.00 61.71 N
ATOM 23 C4 A B1758 -37.534 -4.708 94.225 1.00 61.37 C
ATOM 24 P G B1759 -32.708 -1.260 92.701 1.00 62.74 P
ATOM 25 OP1 G B1759 -31.461 -0.440 92.616 1.00 62.32 O
ATOM 26 OP2 G B1759 -33.853 -0.895 91.861 1.00 62.72 O
ATOM 27 O5' G B1759 -32.357 -2.795 92.491 1.00 63.14 O
TER
Atoms:
OP1: (-38.654,-4.548,105.653)
OP2: (-39.078,-2.061,106.151)
C3': (-37.027,-2.579,101.044)
C1': (-38.866,-1.193,100.523)
C5': (-38.313,-3.832,102.846)
O4': (-39.302,-2.212,101.399)
C8: (-38.893,0.265,102.633)
O2': (-37.794,-2.351,98.756)
C6: (-38.414,3.591,101.660)
C5: (-38.596,2.222,101.877)
C4: (-38.600,1.370,100.781)
P: (-39.201,-3.229,105.224)
C4': (-38.311,-3.263,101.472)
C2': (-37.522,-1.634,99.948)
C2: (-38.282,3.055,99.439)
N1: (-38.251,4.003,100.394)
N3: (-38.441,1.732,99.505)
N6: (-38.403,4.512,102.618)
N7: (-38.783,1.510,103.038)
N9: (-38.779,0.089,101.272)
O5': (-38.638,-2.838,103.789)
O3': (-36.024,-3.505,100.618)
OP2: (-39.078,-2.061,106.151)
C3': (-37.027,-2.579,101.044)
C1': (-38.866,-1.193,100.523)
C5': (-38.313,-3.832,102.846)
O4': (-39.302,-2.212,101.399)
C8: (-38.893,0.265,102.633)
O2': (-37.794,-2.351,98.756)
C6: (-38.414,3.591,101.660)
C5: (-38.596,2.222,101.877)
C4: (-38.600,1.370,100.781)
P: (-39.201,-3.229,105.224)
C4': (-38.311,-3.263,101.472)
C2': (-37.522,-1.634,99.948)
C2: (-38.282,3.055,99.439)
N1: (-38.251,4.003,100.394)
N3: (-38.441,1.732,99.505)
N6: (-38.403,4.512,102.618)
N7: (-38.783,1.510,103.038)
N9: (-38.779,0.089,101.272)
O5': (-38.638,-2.838,103.789)
O3': (-36.024,-3.505,100.618)
OP1: (-36.010,3.195,95.008)
OP2: (-37.780,2.334,93.350)
C3': (-34.534,-1.595,94.515)
C1': (-36.048,-3.116,95.468)
C5': (-35.462,0.435,95.785)
O4': (-36.231,-1.840,96.059)
C8: (-38.102,-2.635,93.885)
O2': (-33.712,-3.564,95.643)
C6: (-39.144,-5.892,92.936)
C5: (-38.632,-4.651,93.383)
C4: (-37.534,-4.708,94.225)
P: (-37.027,2.178,94.634)
C4': (-35.066,-1.018,95.805)
C2': (-34.704,-3.088,94.747)
C2: (-37.519,-6.916,94.163)
N1: (-38.566,-7.024,93.345)
N3: (-36.924,-5.825,94.656)
N6: (-40.171,-6.049,92.113)
N7: (-38.982,-3.321,93.159)
N9: (-37.182,-3.422,94.557)
O5': (-36.373,0.732,94.733)
O3': (-33.213,-1.218,94.221)
OP2: (-37.780,2.334,93.350)
C3': (-34.534,-1.595,94.515)
C1': (-36.048,-3.116,95.468)
C5': (-35.462,0.435,95.785)
O4': (-36.231,-1.840,96.059)
C8: (-38.102,-2.635,93.885)
O2': (-33.712,-3.564,95.643)
C6: (-39.144,-5.892,92.936)
C5: (-38.632,-4.651,93.383)
C4: (-37.534,-4.708,94.225)
P: (-37.027,2.178,94.634)
C4': (-35.066,-1.018,95.805)
C2': (-34.704,-3.088,94.747)
C2: (-37.519,-6.916,94.163)
N1: (-38.566,-7.024,93.345)
N3: (-36.924,-5.825,94.656)
N6: (-40.171,-6.049,92.113)
N7: (-38.982,-3.321,93.159)
N9: (-37.182,-3.422,94.557)
O5': (-36.373,0.732,94.733)
O3': (-33.213,-1.218,94.221)
Image (generated by PyMOL):