Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11527:4108
Extra
PDB:
ATOM 1 O3' C A1526 23.546 1.538 140.280 1.00176.53 O
ATOM 2 P A A1527 24.178 1.708 138.801 1.00 81.81 P
ATOM 3 OP1 A A1527 23.788 3.078 138.318 1.00 81.79 O
ATOM 4 OP2 A A1527 23.755 0.515 137.995 1.00 81.23 O
ATOM 5 O5' A A1527 25.768 1.652 139.082 1.00 82.14 O
ATOM 6 C5' A A1527 26.628 2.763 138.820 1.00 82.35 C
ATOM 7 C4' A A1527 28.071 2.409 139.113 1.00 82.62 C
ATOM 8 O4' A A1527 28.395 1.142 138.486 1.00 82.20 O
ATOM 9 C3' A A1527 29.133 3.359 138.574 1.00 82.72 C
ATOM 10 O3' A A1527 29.345 4.486 139.391 1.00 83.28 O
ATOM 11 C2' A A1527 30.360 2.465 138.467 1.00 82.71 C
ATOM 12 O2' A A1527 30.953 2.263 139.729 1.00 83.27 O
ATOM 13 C1' A A1527 29.736 1.157 138.022 1.00 82.22 C
ATOM 14 N9 A A1527 29.746 1.026 136.545 1.00 81.60 N
ATOM 15 C8 A A1527 28.695 0.888 135.683 1.00 81.08 C
ATOM 16 N7 A A1527 29.034 0.819 134.434 1.00 80.62 N
ATOM 17 C5 A A1527 30.404 0.916 134.469 1.00 80.85 C
ATOM 18 C6 A A1527 31.364 0.894 133.461 1.00 80.58 C
ATOM 19 N6 A A1527 31.067 0.757 132.171 1.00 80.00 N
ATOM 20 N1 A A1527 32.650 1.011 133.822 1.00 80.93 N
ATOM 21 C2 A A1527 32.955 1.143 135.109 1.00 81.52 C
ATOM 22 N3 A A1527 32.136 1.176 136.139 1.00 81.82 N
ATOM 23 C4 A A1527 30.861 1.054 135.750 1.00 81.45 C
ATOM 24 P U A1528 28.780 5.920 138.952 1.00 62.33 P
ATOM 25 OP1 U A1528 28.938 6.819 140.138 1.00 62.99 O
ATOM 26 OP2 U A1528 27.397 5.688 138.380 1.00 62.06 O
ATOM 27 O5' U A1528 29.773 6.374 137.793 1.00 61.84 O
TER
ATOM 1 O3' C B 107 37.144 3.351 136.569 1.00 61.20 O
ATOM 2 P A B 108 37.166 3.283 134.958 1.00 57.85 P
ATOM 3 OP1 A B 108 36.245 2.180 134.559 1.00 57.52 O
ATOM 4 OP2 A B 108 38.606 3.220 134.518 1.00 57.45 O
ATOM 5 O5' A B 108 36.546 4.685 134.555 1.00 57.92 O
ATOM 6 C5' A B 108 36.890 5.295 133.338 1.00 57.28 C
ATOM 7 C4' A B 108 36.715 6.774 133.408 1.00 57.63 C
ATOM 8 O4' A B 108 37.547 7.307 134.472 1.00 58.30 O
ATOM 9 C3' A B 108 37.142 7.525 132.169 1.00 57.01 C
ATOM 10 O3' A B 108 36.143 7.559 131.175 1.00 56.53 O
ATOM 11 C2' A B 108 37.534 8.889 132.710 1.00 57.58 C
ATOM 12 O2' A B 108 36.390 9.679 132.951 1.00 58.01 O
ATOM 13 C1' A B 108 38.156 8.510 134.057 1.00 58.26 C
ATOM 14 N9 A B 108 39.605 8.271 133.942 1.00 58.03 N
ATOM 15 C8 A B 108 40.235 7.121 134.292 1.00 57.95 C
ATOM 16 N7 A B 108 41.521 7.106 134.089 1.00 57.75 N
ATOM 17 C5 A B 108 41.746 8.360 133.564 1.00 57.70 C
ATOM 18 C6 A B 108 42.939 8.962 133.123 1.00 57.52 C
ATOM 19 N6 A B 108 44.079 8.292 133.217 1.00 57.39 N
ATOM 20 N1 A B 108 42.909 10.228 132.606 1.00 57.50 N
ATOM 21 C2 A B 108 41.704 10.827 132.574 1.00 57.68 C
ATOM 22 N3 A B 108 40.509 10.343 132.951 1.00 57.85 N
ATOM 23 C4 A B 108 40.584 9.090 133.444 1.00 57.85 C
ATOM 24 P C B 109 36.506 7.168 129.659 1.00 60.15 P
ATOM 25 OP1 C B 109 35.264 7.258 128.852 1.00 59.84 O
ATOM 26 OP2 C B 109 37.237 5.882 129.703 1.00 59.86 O
ATOM 27 O5' C B 109 37.478 8.324 129.242 1.00 60.06 O
TER
ATOM 2 P A A1527 24.178 1.708 138.801 1.00 81.81 P
ATOM 3 OP1 A A1527 23.788 3.078 138.318 1.00 81.79 O
ATOM 4 OP2 A A1527 23.755 0.515 137.995 1.00 81.23 O
ATOM 5 O5' A A1527 25.768 1.652 139.082 1.00 82.14 O
ATOM 6 C5' A A1527 26.628 2.763 138.820 1.00 82.35 C
ATOM 7 C4' A A1527 28.071 2.409 139.113 1.00 82.62 C
ATOM 8 O4' A A1527 28.395 1.142 138.486 1.00 82.20 O
ATOM 9 C3' A A1527 29.133 3.359 138.574 1.00 82.72 C
ATOM 10 O3' A A1527 29.345 4.486 139.391 1.00 83.28 O
ATOM 11 C2' A A1527 30.360 2.465 138.467 1.00 82.71 C
ATOM 12 O2' A A1527 30.953 2.263 139.729 1.00 83.27 O
ATOM 13 C1' A A1527 29.736 1.157 138.022 1.00 82.22 C
ATOM 14 N9 A A1527 29.746 1.026 136.545 1.00 81.60 N
ATOM 15 C8 A A1527 28.695 0.888 135.683 1.00 81.08 C
ATOM 16 N7 A A1527 29.034 0.819 134.434 1.00 80.62 N
ATOM 17 C5 A A1527 30.404 0.916 134.469 1.00 80.85 C
ATOM 18 C6 A A1527 31.364 0.894 133.461 1.00 80.58 C
ATOM 19 N6 A A1527 31.067 0.757 132.171 1.00 80.00 N
ATOM 20 N1 A A1527 32.650 1.011 133.822 1.00 80.93 N
ATOM 21 C2 A A1527 32.955 1.143 135.109 1.00 81.52 C
ATOM 22 N3 A A1527 32.136 1.176 136.139 1.00 81.82 N
ATOM 23 C4 A A1527 30.861 1.054 135.750 1.00 81.45 C
ATOM 24 P U A1528 28.780 5.920 138.952 1.00 62.33 P
ATOM 25 OP1 U A1528 28.938 6.819 140.138 1.00 62.99 O
ATOM 26 OP2 U A1528 27.397 5.688 138.380 1.00 62.06 O
ATOM 27 O5' U A1528 29.773 6.374 137.793 1.00 61.84 O
TER
ATOM 1 O3' C B 107 37.144 3.351 136.569 1.00 61.20 O
ATOM 2 P A B 108 37.166 3.283 134.958 1.00 57.85 P
ATOM 3 OP1 A B 108 36.245 2.180 134.559 1.00 57.52 O
ATOM 4 OP2 A B 108 38.606 3.220 134.518 1.00 57.45 O
ATOM 5 O5' A B 108 36.546 4.685 134.555 1.00 57.92 O
ATOM 6 C5' A B 108 36.890 5.295 133.338 1.00 57.28 C
ATOM 7 C4' A B 108 36.715 6.774 133.408 1.00 57.63 C
ATOM 8 O4' A B 108 37.547 7.307 134.472 1.00 58.30 O
ATOM 9 C3' A B 108 37.142 7.525 132.169 1.00 57.01 C
ATOM 10 O3' A B 108 36.143 7.559 131.175 1.00 56.53 O
ATOM 11 C2' A B 108 37.534 8.889 132.710 1.00 57.58 C
ATOM 12 O2' A B 108 36.390 9.679 132.951 1.00 58.01 O
ATOM 13 C1' A B 108 38.156 8.510 134.057 1.00 58.26 C
ATOM 14 N9 A B 108 39.605 8.271 133.942 1.00 58.03 N
ATOM 15 C8 A B 108 40.235 7.121 134.292 1.00 57.95 C
ATOM 16 N7 A B 108 41.521 7.106 134.089 1.00 57.75 N
ATOM 17 C5 A B 108 41.746 8.360 133.564 1.00 57.70 C
ATOM 18 C6 A B 108 42.939 8.962 133.123 1.00 57.52 C
ATOM 19 N6 A B 108 44.079 8.292 133.217 1.00 57.39 N
ATOM 20 N1 A B 108 42.909 10.228 132.606 1.00 57.50 N
ATOM 21 C2 A B 108 41.704 10.827 132.574 1.00 57.68 C
ATOM 22 N3 A B 108 40.509 10.343 132.951 1.00 57.85 N
ATOM 23 C4 A B 108 40.584 9.090 133.444 1.00 57.85 C
ATOM 24 P C B 109 36.506 7.168 129.659 1.00 60.15 P
ATOM 25 OP1 C B 109 35.264 7.258 128.852 1.00 59.84 O
ATOM 26 OP2 C B 109 37.237 5.882 129.703 1.00 59.86 O
ATOM 27 O5' C B 109 37.478 8.324 129.242 1.00 60.06 O
TER
Atoms:
OP1: (23.788,3.078,138.318)
OP2: (23.755,0.515,137.995)
C3': (29.133,3.359,138.574)
C1': (29.736,1.157,138.022)
C5': (26.628,2.763,138.820)
O4': (28.395,1.142,138.486)
C8: (28.695,0.888,135.683)
O2': (30.953,2.263,139.729)
C6: (31.364,0.894,133.461)
C5: (30.404,0.916,134.469)
C4: (30.861,1.054,135.750)
P: (24.178,1.708,138.801)
C4': (28.071,2.409,139.113)
C2': (30.360,2.465,138.467)
C2: (32.955,1.143,135.109)
N1: (32.650,1.011,133.822)
N3: (32.136,1.176,136.139)
N6: (31.067,0.757,132.171)
N7: (29.034,0.819,134.434)
N9: (29.746,1.026,136.545)
O5': (25.768,1.652,139.082)
O3': (29.345,4.486,139.391)
OP2: (23.755,0.515,137.995)
C3': (29.133,3.359,138.574)
C1': (29.736,1.157,138.022)
C5': (26.628,2.763,138.820)
O4': (28.395,1.142,138.486)
C8: (28.695,0.888,135.683)
O2': (30.953,2.263,139.729)
C6: (31.364,0.894,133.461)
C5: (30.404,0.916,134.469)
C4: (30.861,1.054,135.750)
P: (24.178,1.708,138.801)
C4': (28.071,2.409,139.113)
C2': (30.360,2.465,138.467)
C2: (32.955,1.143,135.109)
N1: (32.650,1.011,133.822)
N3: (32.136,1.176,136.139)
N6: (31.067,0.757,132.171)
N7: (29.034,0.819,134.434)
N9: (29.746,1.026,136.545)
O5': (25.768,1.652,139.082)
O3': (29.345,4.486,139.391)
OP1: (36.245,2.180,134.559)
OP2: (38.606,3.220,134.518)
C3': (37.142,7.525,132.169)
C1': (38.156,8.510,134.057)
C5': (36.890,5.295,133.338)
O4': (37.547,7.307,134.472)
C8: (40.235,7.121,134.292)
O2': (36.390,9.679,132.951)
C6: (42.939,8.962,133.123)
C5: (41.746,8.360,133.564)
C4: (40.584,9.090,133.444)
P: (37.166,3.283,134.958)
C4': (36.715,6.774,133.408)
C2': (37.534,8.889,132.710)
C2: (41.704,10.827,132.574)
N1: (42.909,10.228,132.606)
N3: (40.509,10.343,132.951)
N6: (44.079,8.292,133.217)
N7: (41.521,7.106,134.089)
N9: (39.605,8.271,133.942)
O5': (36.546,4.685,134.555)
O3': (36.143,7.559,131.175)
OP2: (38.606,3.220,134.518)
C3': (37.142,7.525,132.169)
C1': (38.156,8.510,134.057)
C5': (36.890,5.295,133.338)
O4': (37.547,7.307,134.472)
C8: (40.235,7.121,134.292)
O2': (36.390,9.679,132.951)
C6: (42.939,8.962,133.123)
C5: (41.746,8.360,133.564)
C4: (40.584,9.090,133.444)
P: (37.166,3.283,134.958)
C4': (36.715,6.774,133.408)
C2': (37.534,8.889,132.710)
C2: (41.704,10.827,132.574)
N1: (42.909,10.228,132.606)
N3: (40.509,10.343,132.951)
N6: (44.079,8.292,133.217)
N7: (41.521,7.106,134.089)
N9: (39.605,8.271,133.942)
O5': (36.546,4.685,134.555)
O3': (36.143,7.559,131.175)
Image (generated by PyMOL):