ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1865:1828

Extra

PDB:
ATOM 1 O3' A A 864 32.850 10.746 98.668 1.00 36.60 O
ATOM 2 P A A 865 33.864 10.596 97.433 1.00 37.26 P
ATOM 3 OP1 A A 865 33.561 9.342 96.741 1.00 36.96 O
ATOM 4 OP2 A A 865 35.234 10.782 98.023 1.00 37.38 O
ATOM 5 O5' A A 865 33.538 11.834 96.474 1.00 37.25 O
ATOM 6 C5' A A 865 32.223 12.169 96.101 1.00 37.26 C
ATOM 7 C4' A A 865 32.095 12.248 94.616 1.00 37.00 C
ATOM 8 O4' A A 865 32.829 13.377 94.137 1.00 37.05 O
ATOM 9 C3' A A 865 32.633 11.049 93.873 1.00 36.67 C
ATOM 10 O3' A A 865 31.805 10.776 92.761 1.00 36.47 O
ATOM 11 C2' A A 865 33.983 11.505 93.368 1.00 36.61 C
ATOM 12 O2' A A 865 34.373 10.845 92.176 1.00 36.30 O
ATOM 13 C1' A A 865 33.735 12.990 93.140 1.00 36.79 C
ATOM 14 N9 A A 865 34.909 13.817 93.314 1.00 36.91 N
ATOM 15 C8 A A 865 36.049 13.485 93.959 1.00 36.96 C
ATOM 16 N7 A A 865 36.942 14.426 94.018 1.00 37.10 N
ATOM 17 C5 A A 865 36.310 15.449 93.401 1.00 37.16 C
ATOM 18 C6 A A 865 36.743 16.729 93.176 1.00 37.33 C
ATOM 19 N6 A A 865 37.942 17.088 93.584 1.00 37.45 N
ATOM 20 N1 A A 865 35.911 17.566 92.514 1.00 37.37 N
ATOM 21 C2 A A 865 34.734 17.094 92.113 1.00 37.24 C
ATOM 22 N3 A A 865 34.213 15.911 92.293 1.00 37.09 N
ATOM 23 C4 A A 865 35.061 15.116 92.950 1.00 37.05 C
ATOM 24 P U A 866 30.509 9.927 92.988 1.00 36.75 P
ATOM 25 OP1 U A 866 29.701 9.952 91.718 1.00 36.57 O
ATOM 26 OP2 U A 866 29.960 10.428 94.140 1.00 37.04 O
ATOM 27 O5' U A 866 31.081 8.465 93.224 1.00 36.58 O
TER

ATOM 1 O3' A B 827 32.404 19.422 89.114 1.00 38.59 O
ATOM 2 P A B 828 31.933 19.929 90.545 1.00 37.22 P
ATOM 3 OP1 A B 828 32.793 21.042 90.907 1.00 37.46 O
ATOM 4 OP2 A B 828 31.856 18.744 91.426 1.00 37.14 O
ATOM 5 O5' A B 828 30.498 20.497 90.258 1.00 37.35 O
ATOM 6 C5' A B 828 30.329 21.831 89.803 1.00 37.55 C
ATOM 7 C4' A B 828 28.959 22.019 89.230 1.00 37.57 C
ATOM 8 O4' A B 828 28.828 21.179 88.042 1.00 37.24 O
ATOM 9 C3' A B 828 27.823 21.590 90.160 1.00 37.69 C
ATOM 10 O3' A B 828 26.663 22.370 89.885 1.00 37.88 O
ATOM 11 C2' A B 828 27.560 20.162 89.709 1.00 37.35 C
ATOM 12 O2' A B 828 26.276 19.681 90.034 1.00 37.39 O
ATOM 13 C1' A B 828 27.742 20.300 88.211 1.00 37.15 C
ATOM 14 N9 A B 828 28.046 19.054 87.553 1.00 36.80 N
ATOM 15 C8 A B 828 29.017 18.142 87.807 1.00 36.61 C
ATOM 16 N7 A B 828 28.970 17.096 87.021 1.00 36.32 N
ATOM 17 C5 A B 828 27.890 17.364 86.224 1.00 36.33 C
ATOM 18 C6 A B 828 27.288 16.655 85.202 1.00 36.11 C
ATOM 19 N6 A B 828 27.694 15.468 84.763 1.00 35.83 N
ATOM 20 N1 A B 828 26.205 17.195 84.622 1.00 36.21 N
ATOM 21 C2 A B 828 25.755 18.381 85.057 1.00 36.50 C
ATOM 22 N3 A B 828 26.250 19.140 86.018 1.00 36.73 N
ATOM 23 C4 A B 828 27.319 18.554 86.551 1.00 36.62 C
ATOM 24 P U B 829 26.034 23.319 90.991 1.00 38.25 P
ATOM 25 OP1 U B 829 26.441 22.811 92.317 1.00 38.33 O
ATOM 26 OP2 U B 829 24.623 23.432 90.677 1.00 38.32 O
ATOM 27 O5' U B 829 26.753 24.688 90.692 1.00 38.45 O
TER

Atoms:
OP1: (33.561,9.342,96.741)
OP2: (35.234,10.782,98.023)
C3': (32.633,11.049,93.873)
C1': (33.735,12.990,93.140)
C5': (32.223,12.169,96.101)
O4': (32.829,13.377,94.137)
C8: (36.049,13.485,93.959)
O2': (34.373,10.845,92.176)
C6: (36.743,16.729,93.176)
C5: (36.310,15.449,93.401)
C4: (35.061,15.116,92.950)
P: (33.864,10.596,97.433)
C4': (32.095,12.248,94.616)
C2': (33.983,11.505,93.368)
C2: (34.734,17.094,92.113)
N1: (35.911,17.566,92.514)
N3: (34.213,15.911,92.293)
N6: (37.942,17.088,93.584)
N7: (36.942,14.426,94.018)
N9: (34.909,13.817,93.314)
O5': (33.538,11.834,96.474)
O3': (31.805,10.776,92.761)
OP1: (32.793,21.042,90.907)
OP2: (31.856,18.744,91.426)
C3': (27.823,21.590,90.160)
C1': (27.742,20.300,88.211)
C5': (30.329,21.831,89.803)
O4': (28.828,21.179,88.042)
C8: (29.017,18.142,87.807)
O2': (26.276,19.681,90.034)
C6: (27.288,16.655,85.202)
C5: (27.890,17.364,86.224)
C4: (27.319,18.554,86.551)
P: (31.933,19.929,90.545)
C4': (28.959,22.019,89.230)
C2': (27.560,20.162,89.709)
C2: (25.755,18.381,85.057)
N1: (26.205,17.195,84.622)
N3: (26.250,19.140,86.018)
N6: (27.694,15.468,84.763)
N7: (28.970,17.096,87.021)
N9: (28.046,19.054,87.553)
O5': (30.498,20.497,90.258)
O3': (26.663,22.370,89.885)
Image (generated by PyMOL):
PyMOL image
show in jmol