ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:6308:6349

Extra

PDB:
ATOM 1 O3' U A 307 227.310 36.388 229.714 1.00 48.70 O
ATOM 2 P A A 308 227.496 36.224 228.129 1.00 45.08 P
ATOM 3 OP1 A A 308 227.590 34.785 227.894 1.00 45.14 O
ATOM 4 OP2 A A 308 228.613 37.095 227.703 1.00 45.43 O
ATOM 5 O5' A A 308 226.130 36.768 227.527 1.00 44.98 O
ATOM 6 C5' A A 308 224.920 36.047 227.680 1.00 44.72 C
ATOM 7 C4' A A 308 224.346 35.690 226.354 1.00 44.95 C
ATOM 8 O4' A A 308 224.185 36.898 225.586 1.00 45.15 O
ATOM 9 C3' A A 308 225.208 34.760 225.514 1.00 45.30 C
ATOM 10 O3' A A 308 224.373 33.897 224.736 1.00 45.39 O
ATOM 11 C2' A A 308 225.951 35.710 224.591 1.00 45.70 C
ATOM 12 O2' A A 308 226.327 35.126 223.358 1.00 46.13 O
ATOM 13 C1' A A 308 224.939 36.829 224.401 1.00 45.60 C
ATOM 14 N9 A A 308 225.542 38.141 224.184 1.00 45.80 N
ATOM 15 C8 A A 308 226.750 38.608 224.604 1.00 45.92 C
ATOM 16 N7 A A 308 226.997 39.848 224.257 1.00 46.13 N
ATOM 17 C5 A A 308 225.863 40.242 223.573 1.00 46.14 C
ATOM 18 C6 A A 308 225.489 41.445 222.954 1.00 46.34 C
ATOM 19 N6 A A 308 226.243 42.546 222.890 1.00 46.58 N
ATOM 20 N1 A A 308 224.271 41.490 222.388 1.00 46.31 N
ATOM 21 C2 A A 308 223.482 40.421 222.405 1.00 46.12 C
ATOM 22 N3 A A 308 223.713 39.235 222.940 1.00 45.92 N
ATOM 23 C4 A A 308 224.947 39.207 223.524 1.00 45.94 C
ATOM 24 P U A 309 224.015 32.435 225.273 1.00 47.12 P
ATOM 25 OP1 U A 309 225.207 31.933 226.043 1.00 47.10 O
ATOM 26 OP2 U A 309 223.538 31.656 224.122 1.00 47.40 O
ATOM 27 O5' U A 309 222.823 32.703 226.252 1.00 46.69 O
TER

ATOM 1 O3' A B 348 228.602 46.373 222.704 1.00 50.86 O
ATOM 2 P A B 349 228.130 47.039 224.082 1.00 44.91 P
ATOM 3 OP1 A B 349 229.317 47.591 224.711 1.00 45.08 O
ATOM 4 OP2 A B 349 227.329 46.050 224.831 1.00 44.39 O
ATOM 5 O5' A B 349 227.200 48.216 223.587 1.00 45.00 O
ATOM 6 C5' A B 349 227.747 49.311 222.870 1.00 45.51 C
ATOM 7 C4' A B 349 226.892 49.683 221.699 1.00 45.76 C
ATOM 8 O4' A B 349 226.916 48.625 220.714 1.00 45.95 O
ATOM 9 C3' A B 349 225.446 49.876 222.025 1.00 45.37 C
ATOM 10 O3' A B 349 225.185 51.174 222.444 1.00 45.38 O
ATOM 11 C2' A B 349 224.717 49.492 220.742 1.00 45.62 C
ATOM 12 O2' A B 349 224.665 50.592 219.847 1.00 46.10 O
ATOM 13 C1' A B 349 225.639 48.430 220.161 1.00 45.86 C
ATOM 14 N9 A B 349 225.193 47.058 220.490 1.00 45.47 N
ATOM 15 C8 A B 349 225.928 46.108 221.131 1.00 45.28 C
ATOM 16 N7 A B 349 225.302 44.976 221.279 1.00 44.98 N
ATOM 17 C5 A B 349 224.066 45.174 220.696 1.00 44.98 C
ATOM 18 C6 A B 349 222.931 44.356 220.529 1.00 44.78 C
ATOM 19 N6 A B 349 222.853 43.103 220.947 1.00 44.51 N
ATOM 20 N1 A B 349 221.854 44.844 219.888 1.00 44.90 N
ATOM 21 C2 A B 349 221.911 46.091 219.462 1.00 45.19 C
ATOM 22 N3 A B 349 222.924 46.971 219.565 1.00 45.40 N
ATOM 23 C4 A B 349 223.994 46.452 220.195 1.00 45.29 C
ATOM 24 P C B 350 224.391 51.400 223.775 1.00 51.89 P
ATOM 25 OP1 C B 350 224.079 52.833 223.862 1.00 52.04 O
ATOM 26 OP2 C B 350 225.190 50.792 224.850 1.00 51.63 O
ATOM 27 O5' C B 350 223.052 50.544 223.529 1.00 51.59 O
TER

Atoms:
OP1: (227.590,34.785,227.894)
OP2: (228.613,37.095,227.703)
C3': (225.208,34.760,225.514)
C1': (224.939,36.829,224.401)
C5': (224.920,36.047,227.680)
O4': (224.185,36.898,225.586)
C8: (226.750,38.608,224.604)
O2': (226.327,35.126,223.358)
C6: (225.489,41.445,222.954)
C5: (225.863,40.242,223.573)
C4: (224.947,39.207,223.524)
P: (227.496,36.224,228.129)
C4': (224.346,35.690,226.354)
C2': (225.951,35.710,224.591)
C2: (223.482,40.421,222.405)
N1: (224.271,41.490,222.388)
N3: (223.713,39.235,222.940)
N6: (226.243,42.546,222.890)
N7: (226.997,39.848,224.257)
N9: (225.542,38.141,224.184)
O5': (226.130,36.768,227.527)
O3': (224.373,33.897,224.736)
OP1: (229.317,47.591,224.711)
OP2: (227.329,46.050,224.831)
C3': (225.446,49.876,222.025)
C1': (225.639,48.430,220.161)
C5': (227.747,49.311,222.870)
O4': (226.916,48.625,220.714)
C8: (225.928,46.108,221.131)
O2': (224.665,50.592,219.847)
C6: (222.931,44.356,220.529)
C5: (224.066,45.174,220.696)
C4: (223.994,46.452,220.195)
P: (228.130,47.039,224.082)
C4': (226.892,49.683,221.699)
C2': (224.717,49.492,220.742)
C2: (221.911,46.091,219.462)
N1: (221.854,44.844,219.888)
N3: (222.924,46.971,219.565)
N6: (222.853,43.103,220.947)
N7: (225.302,44.976,221.279)
N9: (225.193,47.058,220.490)
O5': (227.200,48.216,223.587)
O3': (225.185,51.174,222.444)
Image (generated by PyMOL):
PyMOL image
show in jmol