ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11693:11639

Extra

PDB:
ATOM 1 O3' G A1692 29.489 54.508 144.539 1.00 75.57 O
ATOM 2 P A A1693 30.335 55.415 143.513 1.00 77.08 P
ATOM 3 OP1 A A1693 30.213 54.771 142.172 1.00 76.13 O
ATOM 4 OP2 A A1693 31.699 55.610 144.099 1.00 77.44 O
ATOM 5 O5' A A1693 29.552 56.805 143.532 1.00 77.72 O
ATOM 6 C5' A A1693 30.146 57.974 142.990 1.00 77.95 C
ATOM 7 C4' A A1693 29.119 58.970 142.520 1.00 78.19 C
ATOM 8 O4' A A1693 28.524 58.512 141.285 1.00 77.39 O
ATOM 9 C3' A A1693 27.967 59.227 143.483 1.00 78.83 C
ATOM 10 O3' A A1693 27.540 60.573 143.338 1.00 79.40 O
ATOM 11 C2' A A1693 26.872 58.331 142.946 1.00 78.19 C
ATOM 12 O2' A A1693 25.570 58.759 143.306 1.00 78.62 O
ATOM 13 C1' A A1693 27.121 58.441 141.434 1.00 77.48 C
ATOM 14 N9 A A1693 26.642 57.296 140.655 1.00 76.60 N
ATOM 15 C8 A A1693 27.134 56.025 140.692 1.00 76.04 C
ATOM 16 N7 A A1693 26.532 55.204 139.880 1.00 75.32 N
ATOM 17 C5 A A1693 25.569 55.985 139.251 1.00 75.40 C
ATOM 18 C6 A A1693 24.585 55.713 138.265 1.00 74.86 C
ATOM 19 N6 A A1693 24.389 54.514 137.709 1.00 74.09 N
ATOM 20 N1 A A1693 23.781 56.714 137.858 1.00 75.15 N
ATOM 21 C2 A A1693 23.974 57.908 138.395 1.00 75.92 C
ATOM 22 N3 A A1693 24.865 58.279 139.312 1.00 76.48 N
ATOM 23 C4 A A1693 25.642 57.272 139.716 1.00 76.18 C
ATOM 24 P A A1694 27.919 61.661 144.426 1.00 76.91 P
ATOM 25 OP1 A A1694 28.667 60.965 145.499 1.00 77.11 O
ATOM 26 OP2 A A1694 26.668 62.386 144.768 1.00 77.47 O
ATOM 27 O5' A A1694 28.886 62.606 143.620 1.00 76.91 O
TER

ATOM 1 O3' U B1638 21.424 57.525 129.570 1.00 75.53 O
ATOM 2 P U B1639 20.416 57.134 130.756 1.00 72.61 P
ATOM 3 OP1 U B1639 19.519 56.073 130.227 1.00 71.99 O
ATOM 4 OP2 U B1639 19.819 58.393 131.271 1.00 73.44 O
ATOM 5 O5' U B1639 21.393 56.527 131.840 1.00 72.73 O
ATOM 6 C5' U B1639 22.203 55.400 131.539 1.00 72.05 C
ATOM 7 C4' U B1639 22.988 54.955 132.739 1.00 72.33 C
ATOM 8 O4' U B1639 23.909 56.010 133.123 1.00 72.89 O
ATOM 9 C3' U B1639 22.154 54.672 133.979 1.00 72.80 C
ATOM 10 O3' U B1639 22.806 53.681 134.748 1.00 72.68 O
ATOM 11 C2' U B1639 22.230 55.992 134.718 1.00 73.69 C
ATOM 12 O2' U B1639 21.913 55.925 136.099 1.00 74.30 O
ATOM 13 C1' U B1639 23.684 56.343 134.472 1.00 73.65 C
ATOM 14 N1 U B1639 23.995 57.747 134.664 1.00 74.34 N
ATOM 15 C2 U B1639 25.111 58.008 135.441 1.00 74.74 C
ATOM 16 O2 U B1639 25.813 57.129 135.911 1.00 74.53 O
ATOM 17 N3 U B1639 25.389 59.325 135.657 1.00 75.42 N
ATOM 18 C4 U B1639 24.649 60.360 135.161 1.00 75.71 C
ATOM 19 O4 U B1639 25.009 61.495 135.428 1.00 76.34 O
ATOM 20 C5 U B1639 23.511 60.000 134.365 1.00 75.26 C
ATOM 21 C6 U B1639 23.203 58.723 134.143 1.00 74.59 C
ATOM 22 P A B1640 21.943 52.540 135.433 1.00 66.62 P
ATOM 23 OP1 A B1640 20.694 52.414 134.644 1.00 66.30 O
ATOM 24 OP2 A B1640 21.851 52.857 136.867 1.00 67.41 O
ATOM 25 O5' A B1640 22.842 51.253 135.251 1.00 65.95 O
TER

Atoms:
OP1: (30.213,54.771,142.172)
OP2: (31.699,55.610,144.099)
C3': (27.967,59.227,143.483)
C1': (27.121,58.441,141.434)
C5': (30.146,57.974,142.990)
O4': (28.524,58.512,141.285)
C8: (27.134,56.025,140.692)
O2': (25.570,58.759,143.306)
C6: (24.585,55.713,138.265)
C5: (25.569,55.985,139.251)
C4: (25.642,57.272,139.716)
P: (30.335,55.415,143.513)
C4': (29.119,58.970,142.520)
C2': (26.872,58.331,142.946)
C2: (23.974,57.908,138.395)
N1: (23.781,56.714,137.858)
N3: (24.865,58.279,139.312)
N6: (24.389,54.514,137.709)
N7: (26.532,55.204,139.880)
N9: (26.642,57.296,140.655)
O5': (29.552,56.805,143.532)
O3': (27.540,60.573,143.338)
C4: (24.649,60.360,135.161)
N3: (25.389,59.325,135.657)
OP1: (19.519,56.073,130.227)
OP2: (19.819,58.393,131.271)
C2: (25.111,58.008,135.441)
C1': (23.684,56.343,134.472)
C3': (22.154,54.672,133.979)
O5': (21.393,56.527,131.840)
O4': (23.909,56.010,133.123)
C5': (22.203,55.400,131.539)
P: (20.416,57.134,130.756)
C4': (22.988,54.955,132.739)
C2': (22.230,55.992,134.718)
O2': (21.913,55.925,136.099)
N1: (23.995,57.747,134.664)
O4: (25.009,61.495,135.428)
O2: (25.813,57.129,135.911)
C6: (23.203,58.723,134.143)
C5: (23.511,60.000,134.365)
O3': (22.806,53.681,134.748)
Image (generated by PyMOL):
PyMOL image
show in jmol