Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DK1:B35:B32
Extra
PDB:
ATOM 1 O3' C A 34 28.496 68.684 32.644 1.00100.42 O
ATOM 2 P G A 35 28.876 69.563 31.350 1.00 98.67 P
ATOM 3 OP1 G A 35 30.340 69.801 31.370 1.00100.50 O
ATOM 4 OP2 G A 35 27.944 70.718 31.325 1.00 95.17 O
ATOM 5 O5' G A 35 28.514 68.625 30.106 1.00 95.58 O
ATOM 6 C5' G A 35 28.702 69.076 28.741 1.00 97.83 C
ATOM 7 C4' G A 35 28.579 67.911 27.777 1.00101.64 C
ATOM 8 O4' G A 35 29.202 66.755 28.412 1.00105.11 O
ATOM 9 C3' G A 35 27.176 67.419 27.423 1.00106.45 C
ATOM 10 O3' G A 35 26.512 68.138 26.374 1.00110.42 O
ATOM 11 C2' G A 35 27.440 65.962 27.062 1.00112.31 C
ATOM 12 O2' G A 35 28.026 65.777 25.787 1.00113.00 O
ATOM 13 C1' G A 35 28.433 65.583 28.156 1.00119.83 C
ATOM 14 N9 G A 35 27.680 65.263 29.365 1.00130.32 N
ATOM 15 C8 G A 35 26.870 66.125 30.066 1.00137.15 C
ATOM 16 N7 G A 35 26.272 65.563 31.076 1.00135.47 N
ATOM 17 C5 G A 35 26.721 64.252 31.054 1.00134.65 C
ATOM 18 C6 G A 35 26.414 63.186 31.909 1.00135.82 C
ATOM 19 O6 G A 35 25.662 63.189 32.886 1.00142.22 O
ATOM 20 N1 G A 35 27.085 62.021 31.544 1.00129.94 N
ATOM 21 C2 G A 35 27.952 61.911 30.484 1.00126.80 C
ATOM 22 N2 G A 35 28.509 60.701 30.301 1.00111.29 N
ATOM 23 N3 G A 35 28.251 62.914 29.668 1.00129.15 N
ATOM 24 C4 G A 35 27.601 64.051 30.009 1.00132.53 C
ATOM 25 P G A 36 24.929 67.898 26.116 1.00105.47 P
ATOM 26 OP1 G A 36 24.645 67.951 24.654 1.00 92.19 O
ATOM 27 OP2 G A 36 24.184 68.797 27.034 1.00 98.31 O
ATOM 28 O5' G A 36 24.702 66.396 26.608 1.00107.88 O
TER
ATOM 1 O3' C B 31 24.014 55.096 37.491 1.00 73.25 O
ATOM 2 P U B 32 24.968 56.042 38.364 1.00 75.01 P
ATOM 3 OP1 U B 32 25.958 55.168 39.028 1.00 78.70 O
ATOM 4 OP2 U B 32 24.106 56.924 39.192 1.00 71.61 O
ATOM 5 O5' U B 32 25.690 56.932 37.252 1.00 61.33 O
ATOM 6 C5' U B 32 26.413 56.303 36.180 1.00 67.22 C
ATOM 7 C4' U B 32 26.696 57.291 35.079 1.00 71.08 C
ATOM 8 O4' U B 32 25.448 57.709 34.470 1.00 83.80 O
ATOM 9 C3' U B 32 27.336 58.606 35.484 1.00 84.84 C
ATOM 10 O3' U B 32 28.734 58.487 35.714 1.00104.97 O
ATOM 11 C2' U B 32 27.015 59.472 34.276 1.00 81.49 C
ATOM 12 O2' U B 32 27.811 59.165 33.146 1.00 82.79 O
ATOM 13 C1' U B 32 25.579 59.039 33.992 1.00 78.46 C
ATOM 14 N1 U B 32 24.636 59.903 34.715 1.00 74.55 N
ATOM 15 C2 U B 32 24.232 61.047 34.068 1.00 72.51 C
ATOM 16 O2 U B 32 24.546 61.283 32.918 1.00 79.48 O
ATOM 17 N3 U B 32 23.435 61.891 34.806 1.00 57.42 N
ATOM 18 C4 U B 32 22.976 61.679 36.093 1.00 66.52 C
ATOM 19 O4 U B 32 22.293 62.550 36.648 1.00 57.68 O
ATOM 20 C5 U B 32 23.394 60.431 36.679 1.00 60.01 C
ATOM 21 C6 U B 32 24.195 59.609 35.987 1.00 65.81 C
ATOM 22 P U B 33 29.460 59.486 36.749 1.00108.34 P
ATOM 23 OP1 U B 33 30.555 58.715 37.389 1.00107.72 O
ATOM 24 OP2 U B 33 28.413 60.121 37.597 1.00107.21 O
ATOM 25 O5' U B 33 30.098 60.608 35.811 1.00111.95 O
TER
ATOM 2 P G A 35 28.876 69.563 31.350 1.00 98.67 P
ATOM 3 OP1 G A 35 30.340 69.801 31.370 1.00100.50 O
ATOM 4 OP2 G A 35 27.944 70.718 31.325 1.00 95.17 O
ATOM 5 O5' G A 35 28.514 68.625 30.106 1.00 95.58 O
ATOM 6 C5' G A 35 28.702 69.076 28.741 1.00 97.83 C
ATOM 7 C4' G A 35 28.579 67.911 27.777 1.00101.64 C
ATOM 8 O4' G A 35 29.202 66.755 28.412 1.00105.11 O
ATOM 9 C3' G A 35 27.176 67.419 27.423 1.00106.45 C
ATOM 10 O3' G A 35 26.512 68.138 26.374 1.00110.42 O
ATOM 11 C2' G A 35 27.440 65.962 27.062 1.00112.31 C
ATOM 12 O2' G A 35 28.026 65.777 25.787 1.00113.00 O
ATOM 13 C1' G A 35 28.433 65.583 28.156 1.00119.83 C
ATOM 14 N9 G A 35 27.680 65.263 29.365 1.00130.32 N
ATOM 15 C8 G A 35 26.870 66.125 30.066 1.00137.15 C
ATOM 16 N7 G A 35 26.272 65.563 31.076 1.00135.47 N
ATOM 17 C5 G A 35 26.721 64.252 31.054 1.00134.65 C
ATOM 18 C6 G A 35 26.414 63.186 31.909 1.00135.82 C
ATOM 19 O6 G A 35 25.662 63.189 32.886 1.00142.22 O
ATOM 20 N1 G A 35 27.085 62.021 31.544 1.00129.94 N
ATOM 21 C2 G A 35 27.952 61.911 30.484 1.00126.80 C
ATOM 22 N2 G A 35 28.509 60.701 30.301 1.00111.29 N
ATOM 23 N3 G A 35 28.251 62.914 29.668 1.00129.15 N
ATOM 24 C4 G A 35 27.601 64.051 30.009 1.00132.53 C
ATOM 25 P G A 36 24.929 67.898 26.116 1.00105.47 P
ATOM 26 OP1 G A 36 24.645 67.951 24.654 1.00 92.19 O
ATOM 27 OP2 G A 36 24.184 68.797 27.034 1.00 98.31 O
ATOM 28 O5' G A 36 24.702 66.396 26.608 1.00107.88 O
TER
ATOM 1 O3' C B 31 24.014 55.096 37.491 1.00 73.25 O
ATOM 2 P U B 32 24.968 56.042 38.364 1.00 75.01 P
ATOM 3 OP1 U B 32 25.958 55.168 39.028 1.00 78.70 O
ATOM 4 OP2 U B 32 24.106 56.924 39.192 1.00 71.61 O
ATOM 5 O5' U B 32 25.690 56.932 37.252 1.00 61.33 O
ATOM 6 C5' U B 32 26.413 56.303 36.180 1.00 67.22 C
ATOM 7 C4' U B 32 26.696 57.291 35.079 1.00 71.08 C
ATOM 8 O4' U B 32 25.448 57.709 34.470 1.00 83.80 O
ATOM 9 C3' U B 32 27.336 58.606 35.484 1.00 84.84 C
ATOM 10 O3' U B 32 28.734 58.487 35.714 1.00104.97 O
ATOM 11 C2' U B 32 27.015 59.472 34.276 1.00 81.49 C
ATOM 12 O2' U B 32 27.811 59.165 33.146 1.00 82.79 O
ATOM 13 C1' U B 32 25.579 59.039 33.992 1.00 78.46 C
ATOM 14 N1 U B 32 24.636 59.903 34.715 1.00 74.55 N
ATOM 15 C2 U B 32 24.232 61.047 34.068 1.00 72.51 C
ATOM 16 O2 U B 32 24.546 61.283 32.918 1.00 79.48 O
ATOM 17 N3 U B 32 23.435 61.891 34.806 1.00 57.42 N
ATOM 18 C4 U B 32 22.976 61.679 36.093 1.00 66.52 C
ATOM 19 O4 U B 32 22.293 62.550 36.648 1.00 57.68 O
ATOM 20 C5 U B 32 23.394 60.431 36.679 1.00 60.01 C
ATOM 21 C6 U B 32 24.195 59.609 35.987 1.00 65.81 C
ATOM 22 P U B 33 29.460 59.486 36.749 1.00108.34 P
ATOM 23 OP1 U B 33 30.555 58.715 37.389 1.00107.72 O
ATOM 24 OP2 U B 33 28.413 60.121 37.597 1.00107.21 O
ATOM 25 O5' U B 33 30.098 60.608 35.811 1.00111.95 O
TER
Atoms:
OP1: (30.340,69.801,31.370)
OP2: (27.944,70.718,31.325)
C3': (27.176,67.419,27.423)
C1': (28.433,65.583,28.156)
C5': (28.702,69.076,28.741)
O6: (25.662,63.189,32.886)
O4': (29.202,66.755,28.412)
C8: (26.870,66.125,30.066)
C2: (27.952,61.911,30.484)
C6: (26.414,63.186,31.909)
C5: (26.721,64.252,31.054)
C4: (27.601,64.051,30.009)
P: (28.876,69.563,31.350)
C4': (28.579,67.911,27.777)
C2': (27.440,65.962,27.062)
O2': (28.026,65.777,25.787)
N1: (27.085,62.021,31.544)
N2: (28.509,60.701,30.301)
N3: (28.251,62.914,29.668)
N7: (26.272,65.563,31.076)
N9: (27.680,65.263,29.365)
O5': (28.514,68.625,30.106)
O3': (26.512,68.138,26.374)
OP2: (27.944,70.718,31.325)
C3': (27.176,67.419,27.423)
C1': (28.433,65.583,28.156)
C5': (28.702,69.076,28.741)
O6: (25.662,63.189,32.886)
O4': (29.202,66.755,28.412)
C8: (26.870,66.125,30.066)
C2: (27.952,61.911,30.484)
C6: (26.414,63.186,31.909)
C5: (26.721,64.252,31.054)
C4: (27.601,64.051,30.009)
P: (28.876,69.563,31.350)
C4': (28.579,67.911,27.777)
C2': (27.440,65.962,27.062)
O2': (28.026,65.777,25.787)
N1: (27.085,62.021,31.544)
N2: (28.509,60.701,30.301)
N3: (28.251,62.914,29.668)
N7: (26.272,65.563,31.076)
N9: (27.680,65.263,29.365)
O5': (28.514,68.625,30.106)
O3': (26.512,68.138,26.374)
C4: (22.976,61.679,36.093)
N3: (23.435,61.891,34.806)
OP1: (25.958,55.168,39.028)
OP2: (24.106,56.924,39.192)
C2: (24.232,61.047,34.068)
C1': (25.579,59.039,33.992)
C3': (27.336,58.606,35.484)
O5': (25.690,56.932,37.252)
O4': (25.448,57.709,34.470)
C5': (26.413,56.303,36.180)
P: (24.968,56.042,38.364)
C4': (26.696,57.291,35.079)
C2': (27.015,59.472,34.276)
O2': (27.811,59.165,33.146)
N1: (24.636,59.903,34.715)
O4: (22.293,62.550,36.648)
O2: (24.546,61.283,32.918)
C6: (24.195,59.609,35.987)
C5: (23.394,60.431,36.679)
O3': (28.734,58.487,35.714)
N3: (23.435,61.891,34.806)
OP1: (25.958,55.168,39.028)
OP2: (24.106,56.924,39.192)
C2: (24.232,61.047,34.068)
C1': (25.579,59.039,33.992)
C3': (27.336,58.606,35.484)
O5': (25.690,56.932,37.252)
O4': (25.448,57.709,34.470)
C5': (26.413,56.303,36.180)
P: (24.968,56.042,38.364)
C4': (26.696,57.291,35.079)
C2': (27.015,59.472,34.276)
O2': (27.811,59.165,33.146)
N1: (24.636,59.903,34.715)
O4: (22.293,62.550,36.648)
O2: (24.546,61.283,32.918)
C6: (24.195,59.609,35.987)
C5: (23.394,60.431,36.679)
O3': (28.734,58.487,35.714)
Image (generated by PyMOL):