ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NZ4:R134:R69

Extra

PDB:
ATOM 1 O3' U A 133 -3.263 -13.954 58.046 1.00 62.75 O
ATOM 2 P G A 134 -2.682 -15.166 58.914 1.00 65.12 P
ATOM 3 OP1 G A 134 -2.537 -16.298 57.969 1.00 64.62 O
ATOM 4 OP2 G A 134 -3.531 -15.298 60.127 1.00 63.68 O
ATOM 5 O5' G A 134 -1.212 -14.685 59.356 1.00 65.55 O
ATOM 6 C5' G A 134 -0.110 -14.827 58.467 1.00 67.41 C
ATOM 7 C4' G A 134 1.215 -14.573 59.160 1.00 68.71 C
ATOM 8 O4' G A 134 1.157 -13.285 59.814 1.00 69.39 O
ATOM 9 C3' G A 134 1.634 -15.515 60.290 1.00 69.60 C
ATOM 10 O3' G A 134 2.163 -16.753 59.818 1.00 70.13 O
ATOM 11 C2' G A 134 2.721 -14.671 60.936 1.00 69.95 C
ATOM 12 O2' G A 134 3.940 -14.724 60.210 1.00 69.78 O
ATOM 13 C1' G A 134 2.089 -13.274 60.887 1.00 70.46 C
ATOM 14 N9 G A 134 1.416 -12.874 62.133 1.00 70.57 N
ATOM 15 C8 G A 134 0.068 -12.808 62.385 1.00 70.60 C
ATOM 16 N7 G A 134 -0.227 -12.424 63.593 1.00 70.24 N
ATOM 17 C5 G A 134 1.001 -12.223 64.188 1.00 70.23 C
ATOM 18 C6 G A 134 1.312 -11.800 65.500 1.00 70.54 C
ATOM 19 O6 G A 134 0.534 -11.501 66.419 1.00 70.20 O
ATOM 20 N1 G A 134 2.694 -11.729 65.696 1.00 70.86 N
ATOM 21 C2 G A 134 3.657 -12.027 64.751 1.00 70.79 C
ATOM 22 N2 G A 134 4.943 -11.892 65.120 1.00 70.31 N
ATOM 23 N3 G A 134 3.364 -12.423 63.517 1.00 70.97 N
ATOM 24 C4 G A 134 2.024 -12.496 63.307 1.00 70.67 C
ATOM 25 P U A 135 1.582 -18.180 60.261 1.00 71.29 P
ATOM 26 OP1 U A 135 1.788 -19.087 59.111 1.00 70.90 O
ATOM 27 OP2 U A 135 0.225 -18.025 60.837 1.00 71.09 O
ATOM 28 O5' U A 135 2.545 -18.679 61.429 1.00 71.68 O
TER

ATOM 1 O3' U B 68 7.031 -10.534 74.799 1.00 37.32 O
ATOM 2 P U B 69 6.343 -11.926 74.407 1.00 37.18 P
ATOM 3 OP1 U B 69 5.132 -11.982 75.250 1.00 36.70 O
ATOM 4 OP2 U B 69 7.327 -13.033 74.406 1.00 37.02 O
ATOM 5 O5' U B 69 5.909 -11.725 72.891 1.00 37.09 O
ATOM 6 C5' U B 69 4.890 -10.823 72.538 1.00 37.80 C
ATOM 7 C4' U B 69 4.778 -10.771 71.031 1.00 37.92 C
ATOM 8 O4' U B 69 6.005 -10.248 70.459 1.00 38.31 O
ATOM 9 C3' U B 69 4.633 -12.121 70.355 1.00 38.60 C
ATOM 10 O3' U B 69 3.285 -12.656 70.458 1.00 39.14 O
ATOM 11 C2' U B 69 5.059 -11.739 68.945 1.00 38.13 C
ATOM 12 O2' U B 69 4.119 -10.926 68.280 1.00 37.49 O
ATOM 13 C1' U B 69 6.303 -10.927 69.250 1.00 37.91 C
ATOM 14 N1 U B 69 7.578 -11.741 69.350 1.00 38.22 N
ATOM 15 C2 U B 69 8.257 -12.061 68.183 1.00 38.47 C
ATOM 16 O2 U B 69 7.871 -11.737 67.070 1.00 37.80 O
ATOM 17 N3 U B 69 9.415 -12.793 68.357 1.00 37.92 N
ATOM 18 C4 U B 69 9.971 -13.236 69.541 1.00 37.71 C
ATOM 19 O4 U B 69 11.023 -13.879 69.531 1.00 37.67 O
ATOM 20 C5 U B 69 9.217 -12.861 70.709 1.00 37.55 C
ATOM 21 C6 U B 69 8.084 -12.151 70.570 1.00 37.81 C
ATOM 22 P G B 70 3.070 -14.222 70.738 1.00 37.78 P
ATOM 23 OP1 G B 70 1.637 -14.449 71.015 1.00 39.67 O
ATOM 24 OP2 G B 70 4.077 -14.669 71.728 1.00 37.47 O
ATOM 25 O5' G B 70 3.383 -14.857 69.311 1.00 39.75 O
TER

Atoms:
OP1: (-2.537,-16.298,57.969)
OP2: (-3.531,-15.298,60.127)
C3': (1.634,-15.515,60.290)
C1': (2.089,-13.274,60.887)
C5': (-0.110,-14.827,58.467)
O6: (0.534,-11.501,66.419)
O4': (1.157,-13.285,59.814)
C8: (0.068,-12.808,62.385)
C2: (3.657,-12.027,64.751)
C6: (1.312,-11.800,65.500)
C5: (1.001,-12.223,64.188)
C4: (2.024,-12.496,63.307)
P: (-2.682,-15.166,58.914)
C4': (1.215,-14.573,59.160)
C2': (2.721,-14.671,60.936)
O2': (3.940,-14.724,60.210)
N1: (2.694,-11.729,65.696)
N2: (4.943,-11.892,65.120)
N3: (3.364,-12.423,63.517)
N7: (-0.227,-12.424,63.593)
N9: (1.416,-12.874,62.133)
O5': (-1.212,-14.685,59.356)
O3': (2.163,-16.753,59.818)
C4: (9.971,-13.236,69.541)
N3: (9.415,-12.793,68.357)
OP1: (5.132,-11.982,75.250)
OP2: (7.327,-13.033,74.406)
C2: (8.257,-12.061,68.183)
C1': (6.303,-10.927,69.250)
C3': (4.633,-12.121,70.355)
O5': (5.909,-11.725,72.891)
O4': (6.005,-10.248,70.459)
C5': (4.890,-10.823,72.538)
P: (6.343,-11.926,74.407)
C4': (4.778,-10.771,71.031)
C2': (5.059,-11.739,68.945)
O2': (4.119,-10.926,68.280)
N1: (7.578,-11.741,69.350)
O4: (11.023,-13.879,69.531)
O2: (7.871,-11.737,67.070)
C6: (8.084,-12.151,70.570)
C5: (9.217,-12.861,70.709)
O3': (3.285,-12.656,70.458)
Image (generated by PyMOL):
PyMOL image
show in jmol