Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12029:12535
Extra
PDB:
ATOM 1 O3' G A2028 23.407 -70.688 108.233 1.00 71.79 O
ATOM 2 P A A2029 23.557 -71.633 109.521 1.00 68.30 P
ATOM 3 OP1 A A2029 24.489 -72.721 109.165 1.00 68.60 O
ATOM 4 OP2 A A2029 22.204 -71.985 109.977 1.00 68.59 O
ATOM 5 O5' A A2029 24.231 -70.682 110.576 1.00 68.19 O
ATOM 6 C5' A A2029 24.907 -71.222 111.690 1.00 68.65 C
ATOM 7 C4' A A2029 26.037 -70.331 112.098 1.00 68.41 C
ATOM 8 O4' A A2029 27.248 -70.719 111.405 1.00 68.35 O
ATOM 9 C3' A A2029 25.837 -68.867 111.782 1.00 67.80 C
ATOM 10 O3' A A2029 25.107 -68.213 112.821 1.00 67.86 O
ATOM 11 C2' A A2029 27.268 -68.360 111.577 1.00 67.54 C
ATOM 12 O2' A A2029 27.876 -68.090 112.836 1.00 67.77 O
ATOM 13 C1' A A2029 27.955 -69.595 110.969 1.00 67.82 C
ATOM 14 N9 A A2029 27.954 -69.648 109.483 1.00 67.46 N
ATOM 15 C8 A A2029 26.910 -70.107 108.725 1.00 67.46 C
ATOM 16 N7 A A2029 27.120 -70.172 107.429 1.00 67.17 N
ATOM 17 C5 A A2029 28.435 -69.797 107.284 1.00 66.98 C
ATOM 18 C6 A A2029 29.258 -69.681 106.135 1.00 66.67 C
ATOM 19 N6 A A2029 28.900 -69.913 104.859 1.00 66.47 N
ATOM 20 N1 A A2029 30.516 -69.302 106.334 1.00 66.57 N
ATOM 21 C2 A A2029 30.884 -69.054 107.584 1.00 66.77 C
ATOM 22 N3 A A2029 30.219 -69.123 108.739 1.00 67.07 N
ATOM 23 C4 A A2029 28.963 -69.511 108.537 1.00 67.17 C
ATOM 24 P A A2030 24.403 -66.795 112.585 1.00 74.12 P
ATOM 25 OP1 A A2030 23.106 -66.807 113.269 1.00 74.34 O
ATOM 26 OP2 A A2030 24.428 -66.515 111.155 1.00 73.65 O
ATOM 27 O5' A A2030 25.400 -65.831 113.347 1.00 73.97 O
TER
ATOM 1 O3' U B2534 31.864 -72.544 101.687 1.00 68.12 O
ATOM 2 P U B2535 31.601 -71.801 100.278 1.00 67.30 P
ATOM 3 OP1 U B2535 31.038 -72.821 99.340 1.00 67.52 O
ATOM 4 OP2 U B2535 32.854 -71.098 99.904 1.00 66.97 O
ATOM 5 O5' U B2535 30.499 -70.731 100.650 1.00 66.98 O
ATOM 6 C5' U B2535 30.678 -69.372 100.321 1.00 66.41 C
ATOM 7 C4' U B2535 29.981 -68.493 101.305 1.00 66.29 C
ATOM 8 O4' U B2535 30.687 -68.523 102.573 1.00 66.55 O
ATOM 9 C3' U B2535 29.928 -67.040 100.924 1.00 65.70 C
ATOM 10 O3' U B2535 28.845 -66.752 100.087 1.00 65.45 O
ATOM 11 C2' U B2535 29.884 -66.329 102.259 1.00 65.72 C
ATOM 12 O2' U B2535 28.584 -66.385 102.812 1.00 65.87 O
ATOM 13 C1' U B2535 30.808 -67.218 103.092 1.00 66.19 C
ATOM 14 N1 U B2535 32.231 -66.800 102.954 1.00 66.02 N
ATOM 15 C2 U B2535 32.605 -65.524 103.338 1.00 65.66 C
ATOM 16 O2 U B2535 31.832 -64.719 103.835 1.00 65.49 O
ATOM 17 N3 U B2535 33.927 -65.214 103.117 1.00 65.51 N
ATOM 18 C4 U B2535 34.885 -66.008 102.558 1.00 65.68 C
ATOM 19 O4 U B2535 36.019 -65.575 102.435 1.00 65.52 O
ATOM 20 C5 U B2535 34.435 -67.305 102.182 1.00 66.05 C
ATOM 21 C6 U B2535 33.161 -67.640 102.382 1.00 66.20 C
ATOM 22 P G B2536 29.130 -66.189 98.631 1.00 51.99 P
ATOM 23 OP1 G B2536 27.826 -65.921 97.967 1.00 51.80 O
ATOM 24 OP2 G B2536 30.075 -67.112 97.997 1.00 52.18 O
ATOM 25 O5' G B2536 29.837 -64.819 98.958 1.00 51.57 O
TER
ATOM 2 P A A2029 23.557 -71.633 109.521 1.00 68.30 P
ATOM 3 OP1 A A2029 24.489 -72.721 109.165 1.00 68.60 O
ATOM 4 OP2 A A2029 22.204 -71.985 109.977 1.00 68.59 O
ATOM 5 O5' A A2029 24.231 -70.682 110.576 1.00 68.19 O
ATOM 6 C5' A A2029 24.907 -71.222 111.690 1.00 68.65 C
ATOM 7 C4' A A2029 26.037 -70.331 112.098 1.00 68.41 C
ATOM 8 O4' A A2029 27.248 -70.719 111.405 1.00 68.35 O
ATOM 9 C3' A A2029 25.837 -68.867 111.782 1.00 67.80 C
ATOM 10 O3' A A2029 25.107 -68.213 112.821 1.00 67.86 O
ATOM 11 C2' A A2029 27.268 -68.360 111.577 1.00 67.54 C
ATOM 12 O2' A A2029 27.876 -68.090 112.836 1.00 67.77 O
ATOM 13 C1' A A2029 27.955 -69.595 110.969 1.00 67.82 C
ATOM 14 N9 A A2029 27.954 -69.648 109.483 1.00 67.46 N
ATOM 15 C8 A A2029 26.910 -70.107 108.725 1.00 67.46 C
ATOM 16 N7 A A2029 27.120 -70.172 107.429 1.00 67.17 N
ATOM 17 C5 A A2029 28.435 -69.797 107.284 1.00 66.98 C
ATOM 18 C6 A A2029 29.258 -69.681 106.135 1.00 66.67 C
ATOM 19 N6 A A2029 28.900 -69.913 104.859 1.00 66.47 N
ATOM 20 N1 A A2029 30.516 -69.302 106.334 1.00 66.57 N
ATOM 21 C2 A A2029 30.884 -69.054 107.584 1.00 66.77 C
ATOM 22 N3 A A2029 30.219 -69.123 108.739 1.00 67.07 N
ATOM 23 C4 A A2029 28.963 -69.511 108.537 1.00 67.17 C
ATOM 24 P A A2030 24.403 -66.795 112.585 1.00 74.12 P
ATOM 25 OP1 A A2030 23.106 -66.807 113.269 1.00 74.34 O
ATOM 26 OP2 A A2030 24.428 -66.515 111.155 1.00 73.65 O
ATOM 27 O5' A A2030 25.400 -65.831 113.347 1.00 73.97 O
TER
ATOM 1 O3' U B2534 31.864 -72.544 101.687 1.00 68.12 O
ATOM 2 P U B2535 31.601 -71.801 100.278 1.00 67.30 P
ATOM 3 OP1 U B2535 31.038 -72.821 99.340 1.00 67.52 O
ATOM 4 OP2 U B2535 32.854 -71.098 99.904 1.00 66.97 O
ATOM 5 O5' U B2535 30.499 -70.731 100.650 1.00 66.98 O
ATOM 6 C5' U B2535 30.678 -69.372 100.321 1.00 66.41 C
ATOM 7 C4' U B2535 29.981 -68.493 101.305 1.00 66.29 C
ATOM 8 O4' U B2535 30.687 -68.523 102.573 1.00 66.55 O
ATOM 9 C3' U B2535 29.928 -67.040 100.924 1.00 65.70 C
ATOM 10 O3' U B2535 28.845 -66.752 100.087 1.00 65.45 O
ATOM 11 C2' U B2535 29.884 -66.329 102.259 1.00 65.72 C
ATOM 12 O2' U B2535 28.584 -66.385 102.812 1.00 65.87 O
ATOM 13 C1' U B2535 30.808 -67.218 103.092 1.00 66.19 C
ATOM 14 N1 U B2535 32.231 -66.800 102.954 1.00 66.02 N
ATOM 15 C2 U B2535 32.605 -65.524 103.338 1.00 65.66 C
ATOM 16 O2 U B2535 31.832 -64.719 103.835 1.00 65.49 O
ATOM 17 N3 U B2535 33.927 -65.214 103.117 1.00 65.51 N
ATOM 18 C4 U B2535 34.885 -66.008 102.558 1.00 65.68 C
ATOM 19 O4 U B2535 36.019 -65.575 102.435 1.00 65.52 O
ATOM 20 C5 U B2535 34.435 -67.305 102.182 1.00 66.05 C
ATOM 21 C6 U B2535 33.161 -67.640 102.382 1.00 66.20 C
ATOM 22 P G B2536 29.130 -66.189 98.631 1.00 51.99 P
ATOM 23 OP1 G B2536 27.826 -65.921 97.967 1.00 51.80 O
ATOM 24 OP2 G B2536 30.075 -67.112 97.997 1.00 52.18 O
ATOM 25 O5' G B2536 29.837 -64.819 98.958 1.00 51.57 O
TER
Atoms:
OP1: (24.489,-72.721,109.165)
OP2: (22.204,-71.985,109.977)
C3': (25.837,-68.867,111.782)
C1': (27.955,-69.595,110.969)
C5': (24.907,-71.222,111.690)
O4': (27.248,-70.719,111.405)
C8: (26.910,-70.107,108.725)
O2': (27.876,-68.090,112.836)
C6: (29.258,-69.681,106.135)
C5: (28.435,-69.797,107.284)
C4: (28.963,-69.511,108.537)
P: (23.557,-71.633,109.521)
C4': (26.037,-70.331,112.098)
C2': (27.268,-68.360,111.577)
C2: (30.884,-69.054,107.584)
N1: (30.516,-69.302,106.334)
N3: (30.219,-69.123,108.739)
N6: (28.900,-69.913,104.859)
N7: (27.120,-70.172,107.429)
N9: (27.954,-69.648,109.483)
O5': (24.231,-70.682,110.576)
O3': (25.107,-68.213,112.821)
OP2: (22.204,-71.985,109.977)
C3': (25.837,-68.867,111.782)
C1': (27.955,-69.595,110.969)
C5': (24.907,-71.222,111.690)
O4': (27.248,-70.719,111.405)
C8: (26.910,-70.107,108.725)
O2': (27.876,-68.090,112.836)
C6: (29.258,-69.681,106.135)
C5: (28.435,-69.797,107.284)
C4: (28.963,-69.511,108.537)
P: (23.557,-71.633,109.521)
C4': (26.037,-70.331,112.098)
C2': (27.268,-68.360,111.577)
C2: (30.884,-69.054,107.584)
N1: (30.516,-69.302,106.334)
N3: (30.219,-69.123,108.739)
N6: (28.900,-69.913,104.859)
N7: (27.120,-70.172,107.429)
N9: (27.954,-69.648,109.483)
O5': (24.231,-70.682,110.576)
O3': (25.107,-68.213,112.821)
C4: (34.885,-66.008,102.558)
N3: (33.927,-65.214,103.117)
OP1: (31.038,-72.821,99.340)
OP2: (32.854,-71.098,99.904)
C2: (32.605,-65.524,103.338)
C1': (30.808,-67.218,103.092)
C3': (29.928,-67.040,100.924)
O5': (30.499,-70.731,100.650)
O4': (30.687,-68.523,102.573)
C5': (30.678,-69.372,100.321)
P: (31.601,-71.801,100.278)
C4': (29.981,-68.493,101.305)
C2': (29.884,-66.329,102.259)
O2': (28.584,-66.385,102.812)
N1: (32.231,-66.800,102.954)
O4: (36.019,-65.575,102.435)
O2: (31.832,-64.719,103.835)
C6: (33.161,-67.640,102.382)
C5: (34.435,-67.305,102.182)
O3': (28.845,-66.752,100.087)
N3: (33.927,-65.214,103.117)
OP1: (31.038,-72.821,99.340)
OP2: (32.854,-71.098,99.904)
C2: (32.605,-65.524,103.338)
C1': (30.808,-67.218,103.092)
C3': (29.928,-67.040,100.924)
O5': (30.499,-70.731,100.650)
O4': (30.687,-68.523,102.573)
C5': (30.678,-69.372,100.321)
P: (31.601,-71.801,100.278)
C4': (29.981,-68.493,101.305)
C2': (29.884,-66.329,102.259)
O2': (28.584,-66.385,102.812)
N1: (32.231,-66.800,102.954)
O4: (36.019,-65.575,102.435)
O2: (31.832,-64.719,103.835)
C6: (33.161,-67.640,102.382)
C5: (34.435,-67.305,102.182)
O3': (28.845,-66.752,100.087)
Image (generated by PyMOL):