Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A140:A138
Extra
PDB:
ATOM 1 O3' C A 139 1.844 -42.076 60.264 1.00112.85 O
ATOM 2 P G A 140 1.061 -40.780 59.712 1.00117.15 P
ATOM 3 OP1 G A 140 2.037 -39.665 59.659 1.00117.15 O
ATOM 4 OP2 G A 140 -0.160 -40.621 60.544 1.00117.15 O
ATOM 5 O5' G A 140 0.654 -41.212 58.236 1.00117.15 O
ATOM 6 C5' G A 140 -0.300 -40.463 57.497 1.00117.15 C
ATOM 7 C4' G A 140 0.338 -39.711 56.355 1.00117.15 C
ATOM 8 O4' G A 140 1.769 -39.995 56.328 1.00117.15 O
ATOM 9 C3' G A 140 -0.211 -40.065 54.968 1.00117.15 C
ATOM 10 O3' G A 140 -0.492 -38.877 54.218 1.00117.15 O
ATOM 11 C2' G A 140 0.923 -40.868 54.310 1.00117.15 C
ATOM 12 O2' G A 140 1.005 -40.732 52.905 1.00117.15 O
ATOM 13 C1' G A 140 2.168 -40.320 55.007 1.00117.15 C
ATOM 14 N9 G A 140 3.310 -41.270 55.052 1.00115.99 N
ATOM 15 C8 G A 140 4.526 -41.000 54.456 1.00115.99 C
ATOM 16 N7 G A 140 5.410 -41.951 54.566 1.00115.99 N
ATOM 17 C5 G A 140 4.753 -42.940 55.271 1.00115.99 C
ATOM 18 C6 G A 140 5.239 -44.205 55.674 1.00115.99 C
ATOM 19 O6 G A 140 6.355 -44.688 55.477 1.00115.99 O
ATOM 20 N1 G A 140 4.292 -44.933 56.368 1.00115.99 N
ATOM 21 C2 G A 140 3.029 -44.491 56.639 1.00115.99 C
ATOM 22 N2 G A 140 2.255 -45.345 57.330 1.00115.99 N
ATOM 23 N3 G A 140 2.557 -43.306 56.261 1.00115.99 N
ATOM 24 C4 G A 140 3.458 -42.561 55.579 1.00115.99 C
ATOM 25 P A A 141 -2.027 -38.400 54.009 1.00103.05 P
ATOM 26 OP1 A A 141 -2.014 -36.914 53.984 1.00103.05 O
ATOM 27 OP2 A A 141 -2.840 -39.085 55.051 1.00103.05 O
ATOM 28 O5' A A 141 -2.404 -38.973 52.552 1.00103.05 O
TER
ATOM 1 O3' U B 137 10.636 -49.929 61.380 1.00140.96 O
ATOM 2 P U B 138 10.409 -49.229 59.942 1.00137.35 P
ATOM 3 OP1 U B 138 11.232 -49.980 58.959 1.00137.35 O
ATOM 4 OP2 U B 138 10.659 -47.775 60.117 1.00137.35 O
ATOM 5 O5' U B 138 8.859 -49.480 59.658 1.00137.35 O
ATOM 6 C5' U B 138 7.871 -48.541 60.082 1.00137.35 C
ATOM 7 C4' U B 138 7.415 -47.649 58.948 1.00137.35 C
ATOM 8 O4' U B 138 7.516 -48.374 57.691 1.00137.35 O
ATOM 9 C3' U B 138 5.973 -47.153 59.044 1.00137.35 C
ATOM 10 O3' U B 138 5.894 -45.817 58.539 1.00137.35 O
ATOM 11 C2' U B 138 5.213 -48.117 58.127 1.00137.35 C
ATOM 12 O2' U B 138 4.016 -47.600 57.585 1.00137.35 O
ATOM 13 C1' U B 138 6.254 -48.412 57.042 1.00137.35 C
ATOM 14 N1 U B 138 6.109 -49.758 56.387 1.00135.60 N
ATOM 15 C2 U B 138 6.119 -49.845 54.988 1.00135.60 C
ATOM 16 O2 U B 138 6.213 -48.870 54.245 1.00135.60 O
ATOM 17 N3 U B 138 6.003 -51.131 54.483 1.00135.60 N
ATOM 18 C4 U B 138 5.895 -52.317 55.197 1.00135.60 C
ATOM 19 O4 U B 138 5.795 -53.392 54.589 1.00135.60 O
ATOM 20 C5 U B 138 5.900 -52.153 56.625 1.00135.60 C
ATOM 21 C6 U B 138 6.010 -50.918 57.147 1.00135.60 C
ATOM 22 P C B 139 6.888 -44.683 59.116 1.00112.85 P
ATOM 23 OP1 C B 139 8.086 -44.670 58.240 1.00112.85 O
ATOM 24 OP2 C B 139 7.071 -44.958 60.570 1.00112.85 O
ATOM 25 O5' C B 139 6.055 -43.336 58.915 1.00112.85 O
TER
ATOM 2 P G A 140 1.061 -40.780 59.712 1.00117.15 P
ATOM 3 OP1 G A 140 2.037 -39.665 59.659 1.00117.15 O
ATOM 4 OP2 G A 140 -0.160 -40.621 60.544 1.00117.15 O
ATOM 5 O5' G A 140 0.654 -41.212 58.236 1.00117.15 O
ATOM 6 C5' G A 140 -0.300 -40.463 57.497 1.00117.15 C
ATOM 7 C4' G A 140 0.338 -39.711 56.355 1.00117.15 C
ATOM 8 O4' G A 140 1.769 -39.995 56.328 1.00117.15 O
ATOM 9 C3' G A 140 -0.211 -40.065 54.968 1.00117.15 C
ATOM 10 O3' G A 140 -0.492 -38.877 54.218 1.00117.15 O
ATOM 11 C2' G A 140 0.923 -40.868 54.310 1.00117.15 C
ATOM 12 O2' G A 140 1.005 -40.732 52.905 1.00117.15 O
ATOM 13 C1' G A 140 2.168 -40.320 55.007 1.00117.15 C
ATOM 14 N9 G A 140 3.310 -41.270 55.052 1.00115.99 N
ATOM 15 C8 G A 140 4.526 -41.000 54.456 1.00115.99 C
ATOM 16 N7 G A 140 5.410 -41.951 54.566 1.00115.99 N
ATOM 17 C5 G A 140 4.753 -42.940 55.271 1.00115.99 C
ATOM 18 C6 G A 140 5.239 -44.205 55.674 1.00115.99 C
ATOM 19 O6 G A 140 6.355 -44.688 55.477 1.00115.99 O
ATOM 20 N1 G A 140 4.292 -44.933 56.368 1.00115.99 N
ATOM 21 C2 G A 140 3.029 -44.491 56.639 1.00115.99 C
ATOM 22 N2 G A 140 2.255 -45.345 57.330 1.00115.99 N
ATOM 23 N3 G A 140 2.557 -43.306 56.261 1.00115.99 N
ATOM 24 C4 G A 140 3.458 -42.561 55.579 1.00115.99 C
ATOM 25 P A A 141 -2.027 -38.400 54.009 1.00103.05 P
ATOM 26 OP1 A A 141 -2.014 -36.914 53.984 1.00103.05 O
ATOM 27 OP2 A A 141 -2.840 -39.085 55.051 1.00103.05 O
ATOM 28 O5' A A 141 -2.404 -38.973 52.552 1.00103.05 O
TER
ATOM 1 O3' U B 137 10.636 -49.929 61.380 1.00140.96 O
ATOM 2 P U B 138 10.409 -49.229 59.942 1.00137.35 P
ATOM 3 OP1 U B 138 11.232 -49.980 58.959 1.00137.35 O
ATOM 4 OP2 U B 138 10.659 -47.775 60.117 1.00137.35 O
ATOM 5 O5' U B 138 8.859 -49.480 59.658 1.00137.35 O
ATOM 6 C5' U B 138 7.871 -48.541 60.082 1.00137.35 C
ATOM 7 C4' U B 138 7.415 -47.649 58.948 1.00137.35 C
ATOM 8 O4' U B 138 7.516 -48.374 57.691 1.00137.35 O
ATOM 9 C3' U B 138 5.973 -47.153 59.044 1.00137.35 C
ATOM 10 O3' U B 138 5.894 -45.817 58.539 1.00137.35 O
ATOM 11 C2' U B 138 5.213 -48.117 58.127 1.00137.35 C
ATOM 12 O2' U B 138 4.016 -47.600 57.585 1.00137.35 O
ATOM 13 C1' U B 138 6.254 -48.412 57.042 1.00137.35 C
ATOM 14 N1 U B 138 6.109 -49.758 56.387 1.00135.60 N
ATOM 15 C2 U B 138 6.119 -49.845 54.988 1.00135.60 C
ATOM 16 O2 U B 138 6.213 -48.870 54.245 1.00135.60 O
ATOM 17 N3 U B 138 6.003 -51.131 54.483 1.00135.60 N
ATOM 18 C4 U B 138 5.895 -52.317 55.197 1.00135.60 C
ATOM 19 O4 U B 138 5.795 -53.392 54.589 1.00135.60 O
ATOM 20 C5 U B 138 5.900 -52.153 56.625 1.00135.60 C
ATOM 21 C6 U B 138 6.010 -50.918 57.147 1.00135.60 C
ATOM 22 P C B 139 6.888 -44.683 59.116 1.00112.85 P
ATOM 23 OP1 C B 139 8.086 -44.670 58.240 1.00112.85 O
ATOM 24 OP2 C B 139 7.071 -44.958 60.570 1.00112.85 O
ATOM 25 O5' C B 139 6.055 -43.336 58.915 1.00112.85 O
TER
Atoms:
OP1: (2.037,-39.665,59.659)
OP2: (-0.160,-40.621,60.544)
C3': (-0.211,-40.065,54.968)
C1': (2.168,-40.320,55.007)
C5': (-0.300,-40.463,57.497)
O6: (6.355,-44.688,55.477)
O4': (1.769,-39.995,56.328)
C8: (4.526,-41.000,54.456)
C2: (3.029,-44.491,56.639)
C6: (5.239,-44.205,55.674)
C5: (4.753,-42.940,55.271)
C4: (3.458,-42.561,55.579)
P: (1.061,-40.780,59.712)
C4': (0.338,-39.711,56.355)
C2': (0.923,-40.868,54.310)
O2': (1.005,-40.732,52.905)
N1: (4.292,-44.933,56.368)
N2: (2.255,-45.345,57.330)
N3: (2.557,-43.306,56.261)
N7: (5.410,-41.951,54.566)
N9: (3.310,-41.270,55.052)
O5': (0.654,-41.212,58.236)
O3': (-0.492,-38.877,54.218)
OP2: (-0.160,-40.621,60.544)
C3': (-0.211,-40.065,54.968)
C1': (2.168,-40.320,55.007)
C5': (-0.300,-40.463,57.497)
O6: (6.355,-44.688,55.477)
O4': (1.769,-39.995,56.328)
C8: (4.526,-41.000,54.456)
C2: (3.029,-44.491,56.639)
C6: (5.239,-44.205,55.674)
C5: (4.753,-42.940,55.271)
C4: (3.458,-42.561,55.579)
P: (1.061,-40.780,59.712)
C4': (0.338,-39.711,56.355)
C2': (0.923,-40.868,54.310)
O2': (1.005,-40.732,52.905)
N1: (4.292,-44.933,56.368)
N2: (2.255,-45.345,57.330)
N3: (2.557,-43.306,56.261)
N7: (5.410,-41.951,54.566)
N9: (3.310,-41.270,55.052)
O5': (0.654,-41.212,58.236)
O3': (-0.492,-38.877,54.218)
C4: (5.895,-52.317,55.197)
N3: (6.003,-51.131,54.483)
OP1: (11.232,-49.980,58.959)
OP2: (10.659,-47.775,60.117)
C2: (6.119,-49.845,54.988)
C1': (6.254,-48.412,57.042)
C3': (5.973,-47.153,59.044)
O5': (8.859,-49.480,59.658)
O4': (7.516,-48.374,57.691)
C5': (7.871,-48.541,60.082)
P: (10.409,-49.229,59.942)
C4': (7.415,-47.649,58.948)
C2': (5.213,-48.117,58.127)
O2': (4.016,-47.600,57.585)
N1: (6.109,-49.758,56.387)
O4: (5.795,-53.392,54.589)
O2: (6.213,-48.870,54.245)
C6: (6.010,-50.918,57.147)
C5: (5.900,-52.153,56.625)
O3': (5.894,-45.817,58.539)
N3: (6.003,-51.131,54.483)
OP1: (11.232,-49.980,58.959)
OP2: (10.659,-47.775,60.117)
C2: (6.119,-49.845,54.988)
C1': (6.254,-48.412,57.042)
C3': (5.973,-47.153,59.044)
O5': (8.859,-49.480,59.658)
O4': (7.516,-48.374,57.691)
C5': (7.871,-48.541,60.082)
P: (10.409,-49.229,59.942)
C4': (7.415,-47.649,58.948)
C2': (5.213,-48.117,58.127)
O2': (4.016,-47.600,57.585)
N1: (6.109,-49.758,56.387)
O4: (5.795,-53.392,54.589)
O2: (6.213,-48.870,54.245)
C6: (6.010,-50.918,57.147)
C5: (5.900,-52.153,56.625)
O3': (5.894,-45.817,58.539)
Image (generated by PyMOL):