Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12344:12265
Extra
PDB:
ATOM 1 O3' A A2343 2.320 -28.298 132.503 1.00 79.78 O
ATOM 2 P G A2344 1.764 -29.730 132.951 1.00 68.35 P
ATOM 3 OP1 G A2344 0.889 -30.247 131.856 1.00 68.10 O
ATOM 4 OP2 G A2344 1.183 -29.562 134.320 1.00 68.95 O
ATOM 5 O5' G A2344 3.083 -30.604 133.050 1.00 68.31 O
ATOM 6 C5' G A2344 4.113 -30.517 132.082 1.00 67.80 C
ATOM 7 C4' G A2344 5.343 -31.208 132.584 1.00 67.93 C
ATOM 8 O4' G A2344 5.902 -30.446 133.670 1.00 68.21 O
ATOM 9 C3' G A2344 5.114 -32.576 133.186 1.00 68.34 C
ATOM 10 O3' G A2344 5.013 -33.580 132.200 1.00 68.08 O
ATOM 11 C2' G A2344 6.307 -32.740 134.127 1.00 68.60 C
ATOM 12 O2' G A2344 7.451 -33.179 133.418 1.00 68.25 O
ATOM 13 C1' G A2344 6.553 -31.302 134.572 1.00 68.59 C
ATOM 14 N9 G A2344 6.054 -31.021 135.916 1.00 69.16 N
ATOM 15 C8 G A2344 4.861 -30.486 136.272 1.00 69.39 C
ATOM 16 N7 G A2344 4.729 -30.314 137.554 1.00 69.92 N
ATOM 17 C5 G A2344 5.926 -30.737 138.066 1.00 70.05 C
ATOM 18 C6 G A2344 6.409 -30.784 139.404 1.00 70.57 C
ATOM 19 O6 G A2344 5.870 -30.463 140.476 1.00 71.07 O
ATOM 20 N1 G A2344 7.705 -31.275 139.437 1.00 70.51 N
ATOM 21 C2 G A2344 8.435 -31.667 138.360 1.00 70.02 C
ATOM 22 N2 G A2344 9.664 -32.102 138.639 1.00 70.07 N
ATOM 23 N3 G A2344 7.995 -31.629 137.121 1.00 69.53 N
ATOM 24 C4 G A2344 6.750 -31.158 137.055 1.00 69.58 C
ATOM 25 P A A2345 4.422 -35.026 132.552 1.00 62.78 P
ATOM 26 OP1 A A2345 3.768 -35.538 131.322 1.00 62.45 O
ATOM 27 OP2 A A2345 3.617 -34.894 133.795 1.00 63.34 O
ATOM 28 O5' A A2345 5.729 -35.861 132.857 1.00 62.86 O
TER
ATOM 1 O3' C B2264 2.724 -34.926 143.825 1.00 80.73 O
ATOM 2 P U B2265 3.414 -33.485 143.882 1.00 74.39 P
ATOM 3 OP1 U B2265 3.079 -32.886 145.201 1.00 74.98 O
ATOM 4 OP2 U B2265 3.032 -32.751 142.640 1.00 73.79 O
ATOM 5 O5' U B2265 4.948 -33.872 143.823 1.00 74.25 O
ATOM 6 C5' U B2265 5.872 -33.409 144.791 1.00 74.55 C
ATOM 7 C4' U B2265 7.253 -33.370 144.215 1.00 74.14 C
ATOM 8 O4' U B2265 7.312 -34.377 143.163 1.00 73.77 O
ATOM 9 C3' U B2265 7.625 -32.040 143.550 1.00 73.65 C
ATOM 10 O3' U B2265 8.571 -31.200 144.298 1.00 73.82 O
ATOM 11 C2' U B2265 8.210 -32.412 142.204 1.00 73.02 C
ATOM 12 O2' U B2265 9.526 -31.962 142.007 1.00 72.77 O
ATOM 13 C1' U B2265 8.126 -33.936 142.116 1.00 73.16 C
ATOM 14 N1 U B2265 7.553 -34.324 140.833 1.00 72.69 N
ATOM 15 C2 U B2265 8.421 -34.780 139.850 1.00 72.24 C
ATOM 16 O2 U B2265 9.580 -35.093 140.062 1.00 72.27 O
ATOM 17 N3 U B2265 7.878 -34.937 138.606 1.00 71.77 N
ATOM 18 C4 U B2265 6.593 -34.599 138.230 1.00 71.69 C
ATOM 19 O4 U B2265 6.224 -34.787 137.051 1.00 71.26 O
ATOM 20 C5 U B2265 5.797 -34.052 139.296 1.00 72.16 C
ATOM 21 C6 U B2265 6.304 -33.894 140.516 1.00 72.62 C
ATOM 22 P U B2266 9.741 -31.752 145.260 1.00 59.28 P
ATOM 23 OP1 U B2266 9.739 -33.238 145.208 1.00 59.42 O
ATOM 24 OP2 U B2266 9.574 -31.089 146.558 1.00 59.85 O
ATOM 25 O5' U B2266 11.051 -31.217 144.602 1.00 58.81 O
TER
ATOM 2 P G A2344 1.764 -29.730 132.951 1.00 68.35 P
ATOM 3 OP1 G A2344 0.889 -30.247 131.856 1.00 68.10 O
ATOM 4 OP2 G A2344 1.183 -29.562 134.320 1.00 68.95 O
ATOM 5 O5' G A2344 3.083 -30.604 133.050 1.00 68.31 O
ATOM 6 C5' G A2344 4.113 -30.517 132.082 1.00 67.80 C
ATOM 7 C4' G A2344 5.343 -31.208 132.584 1.00 67.93 C
ATOM 8 O4' G A2344 5.902 -30.446 133.670 1.00 68.21 O
ATOM 9 C3' G A2344 5.114 -32.576 133.186 1.00 68.34 C
ATOM 10 O3' G A2344 5.013 -33.580 132.200 1.00 68.08 O
ATOM 11 C2' G A2344 6.307 -32.740 134.127 1.00 68.60 C
ATOM 12 O2' G A2344 7.451 -33.179 133.418 1.00 68.25 O
ATOM 13 C1' G A2344 6.553 -31.302 134.572 1.00 68.59 C
ATOM 14 N9 G A2344 6.054 -31.021 135.916 1.00 69.16 N
ATOM 15 C8 G A2344 4.861 -30.486 136.272 1.00 69.39 C
ATOM 16 N7 G A2344 4.729 -30.314 137.554 1.00 69.92 N
ATOM 17 C5 G A2344 5.926 -30.737 138.066 1.00 70.05 C
ATOM 18 C6 G A2344 6.409 -30.784 139.404 1.00 70.57 C
ATOM 19 O6 G A2344 5.870 -30.463 140.476 1.00 71.07 O
ATOM 20 N1 G A2344 7.705 -31.275 139.437 1.00 70.51 N
ATOM 21 C2 G A2344 8.435 -31.667 138.360 1.00 70.02 C
ATOM 22 N2 G A2344 9.664 -32.102 138.639 1.00 70.07 N
ATOM 23 N3 G A2344 7.995 -31.629 137.121 1.00 69.53 N
ATOM 24 C4 G A2344 6.750 -31.158 137.055 1.00 69.58 C
ATOM 25 P A A2345 4.422 -35.026 132.552 1.00 62.78 P
ATOM 26 OP1 A A2345 3.768 -35.538 131.322 1.00 62.45 O
ATOM 27 OP2 A A2345 3.617 -34.894 133.795 1.00 63.34 O
ATOM 28 O5' A A2345 5.729 -35.861 132.857 1.00 62.86 O
TER
ATOM 1 O3' C B2264 2.724 -34.926 143.825 1.00 80.73 O
ATOM 2 P U B2265 3.414 -33.485 143.882 1.00 74.39 P
ATOM 3 OP1 U B2265 3.079 -32.886 145.201 1.00 74.98 O
ATOM 4 OP2 U B2265 3.032 -32.751 142.640 1.00 73.79 O
ATOM 5 O5' U B2265 4.948 -33.872 143.823 1.00 74.25 O
ATOM 6 C5' U B2265 5.872 -33.409 144.791 1.00 74.55 C
ATOM 7 C4' U B2265 7.253 -33.370 144.215 1.00 74.14 C
ATOM 8 O4' U B2265 7.312 -34.377 143.163 1.00 73.77 O
ATOM 9 C3' U B2265 7.625 -32.040 143.550 1.00 73.65 C
ATOM 10 O3' U B2265 8.571 -31.200 144.298 1.00 73.82 O
ATOM 11 C2' U B2265 8.210 -32.412 142.204 1.00 73.02 C
ATOM 12 O2' U B2265 9.526 -31.962 142.007 1.00 72.77 O
ATOM 13 C1' U B2265 8.126 -33.936 142.116 1.00 73.16 C
ATOM 14 N1 U B2265 7.553 -34.324 140.833 1.00 72.69 N
ATOM 15 C2 U B2265 8.421 -34.780 139.850 1.00 72.24 C
ATOM 16 O2 U B2265 9.580 -35.093 140.062 1.00 72.27 O
ATOM 17 N3 U B2265 7.878 -34.937 138.606 1.00 71.77 N
ATOM 18 C4 U B2265 6.593 -34.599 138.230 1.00 71.69 C
ATOM 19 O4 U B2265 6.224 -34.787 137.051 1.00 71.26 O
ATOM 20 C5 U B2265 5.797 -34.052 139.296 1.00 72.16 C
ATOM 21 C6 U B2265 6.304 -33.894 140.516 1.00 72.62 C
ATOM 22 P U B2266 9.741 -31.752 145.260 1.00 59.28 P
ATOM 23 OP1 U B2266 9.739 -33.238 145.208 1.00 59.42 O
ATOM 24 OP2 U B2266 9.574 -31.089 146.558 1.00 59.85 O
ATOM 25 O5' U B2266 11.051 -31.217 144.602 1.00 58.81 O
TER
Atoms:
OP1: (0.889,-30.247,131.856)
OP2: (1.183,-29.562,134.320)
C3': (5.114,-32.576,133.186)
C1': (6.553,-31.302,134.572)
C5': (4.113,-30.517,132.082)
O6: (5.870,-30.463,140.476)
O4': (5.902,-30.446,133.670)
C8: (4.861,-30.486,136.272)
C2: (8.435,-31.667,138.360)
C6: (6.409,-30.784,139.404)
C5: (5.926,-30.737,138.066)
C4: (6.750,-31.158,137.055)
P: (1.764,-29.730,132.951)
C4': (5.343,-31.208,132.584)
C2': (6.307,-32.740,134.127)
O2': (7.451,-33.179,133.418)
N1: (7.705,-31.275,139.437)
N2: (9.664,-32.102,138.639)
N3: (7.995,-31.629,137.121)
N7: (4.729,-30.314,137.554)
N9: (6.054,-31.021,135.916)
O5': (3.083,-30.604,133.050)
O3': (5.013,-33.580,132.200)
OP2: (1.183,-29.562,134.320)
C3': (5.114,-32.576,133.186)
C1': (6.553,-31.302,134.572)
C5': (4.113,-30.517,132.082)
O6: (5.870,-30.463,140.476)
O4': (5.902,-30.446,133.670)
C8: (4.861,-30.486,136.272)
C2: (8.435,-31.667,138.360)
C6: (6.409,-30.784,139.404)
C5: (5.926,-30.737,138.066)
C4: (6.750,-31.158,137.055)
P: (1.764,-29.730,132.951)
C4': (5.343,-31.208,132.584)
C2': (6.307,-32.740,134.127)
O2': (7.451,-33.179,133.418)
N1: (7.705,-31.275,139.437)
N2: (9.664,-32.102,138.639)
N3: (7.995,-31.629,137.121)
N7: (4.729,-30.314,137.554)
N9: (6.054,-31.021,135.916)
O5': (3.083,-30.604,133.050)
O3': (5.013,-33.580,132.200)
C4: (6.593,-34.599,138.230)
N3: (7.878,-34.937,138.606)
OP1: (3.079,-32.886,145.201)
OP2: (3.032,-32.751,142.640)
C2: (8.421,-34.780,139.850)
C1': (8.126,-33.936,142.116)
C3': (7.625,-32.040,143.550)
O5': (4.948,-33.872,143.823)
O4': (7.312,-34.377,143.163)
C5': (5.872,-33.409,144.791)
P: (3.414,-33.485,143.882)
C4': (7.253,-33.370,144.215)
C2': (8.210,-32.412,142.204)
O2': (9.526,-31.962,142.007)
N1: (7.553,-34.324,140.833)
O4: (6.224,-34.787,137.051)
O2: (9.580,-35.093,140.062)
C6: (6.304,-33.894,140.516)
C5: (5.797,-34.052,139.296)
O3': (8.571,-31.200,144.298)
N3: (7.878,-34.937,138.606)
OP1: (3.079,-32.886,145.201)
OP2: (3.032,-32.751,142.640)
C2: (8.421,-34.780,139.850)
C1': (8.126,-33.936,142.116)
C3': (7.625,-32.040,143.550)
O5': (4.948,-33.872,143.823)
O4': (7.312,-34.377,143.163)
C5': (5.872,-33.409,144.791)
P: (3.414,-33.485,143.882)
C4': (7.253,-33.370,144.215)
C2': (8.210,-32.412,142.204)
O2': (9.526,-31.962,142.007)
N1: (7.553,-34.324,140.833)
O4: (6.224,-34.787,137.051)
O2: (9.580,-35.093,140.062)
C6: (6.304,-33.894,140.516)
C5: (5.797,-34.052,139.296)
O3': (8.571,-31.200,144.298)
Image (generated by PyMOL):