Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02453:02041
Extra
PDB:
ATOM 1 O3' G A2452 62.795 134.662 104.987 1.00 27.16 O
ATOM 2 P A A2453 61.307 134.216 104.598 1.00 28.79 P
ATOM 3 OP1 A A2453 60.599 133.804 105.832 1.00 26.93 O
ATOM 4 OP2 A A2453 61.387 133.282 103.461 1.00 31.27 O
ATOM 5 O5' A A2453 60.642 135.571 104.077 1.00 32.49 O
ATOM 6 C5' A A2453 61.251 136.348 103.019 1.00 30.88 C
ATOM 7 C4' A A2453 60.198 137.089 102.216 1.00 31.28 C
ATOM 8 O4' A A2453 59.268 136.140 101.626 1.00 33.20 O
ATOM 9 C3' A A2453 59.276 138.036 102.960 1.00 31.75 C
ATOM 10 O3' A A2453 59.859 139.298 103.221 1.00 34.58 O
ATOM 11 C2' A A2453 58.127 138.187 101.983 1.00 32.77 C
ATOM 12 O2' A A2453 58.485 139.048 100.922 1.00 32.20 O
ATOM 13 C1' A A2453 57.997 136.756 101.465 1.00 32.67 C
ATOM 14 N9 A A2453 56.992 135.971 102.185 1.00 31.05 N
ATOM 15 C8 A A2453 57.168 135.154 103.272 1.00 32.17 C
ATOM 16 N7 A A2453 56.071 134.559 103.670 1.00 31.22 N
ATOM 17 C5 A A2453 55.104 135.018 102.790 1.00 30.92 C
ATOM 18 C6 A A2453 53.724 134.747 102.665 1.00 29.58 C
ATOM 19 N6 A A2453 53.058 133.882 103.438 1.00 25.36 N
ATOM 20 N1 A A2453 53.048 135.391 101.692 1.00 28.42 N
ATOM 21 C2 A A2453 53.717 136.225 100.891 1.00 29.67 C
ATOM 22 N3 A A2453 55.008 136.544 100.893 1.00 31.90 N
ATOM 23 C4 A A2453 55.654 135.902 101.879 1.00 31.57 C
ATOM 24 P G A2454 60.016 139.770 104.737 1.00 32.98 P
ATOM 25 OP1 G A2454 58.646 139.913 105.285 1.00 31.04 O
ATOM 26 OP2 G A2454 60.939 140.923 104.784 1.00 32.45 O
ATOM 27 O5' G A2454 60.762 138.493 105.336 1.00 33.68 O
TER
ATOM 1 O3' G B2040 52.199 128.055 106.041 1.00 30.41 O
ATOM 2 P A B2041 52.666 127.938 104.503 1.00 29.61 P
ATOM 3 OP1 A B2041 53.086 126.533 104.304 1.00 28.65 O
ATOM 4 OP2 A B2041 53.612 129.038 104.172 1.00 30.74 O
ATOM 5 O5' A B2041 51.333 128.184 103.672 1.00 29.55 O
ATOM 6 C5' A B2041 50.206 127.311 103.822 1.00 28.12 C
ATOM 7 C4' A B2041 49.022 127.847 103.063 1.00 28.28 C
ATOM 8 O4' A B2041 48.740 129.200 103.501 1.00 29.37 O
ATOM 9 C3' A B2041 49.171 127.978 101.556 1.00 28.94 C
ATOM 10 O3' A B2041 48.897 126.732 100.936 1.00 30.70 O
ATOM 11 C2' A B2041 48.078 128.984 101.221 1.00 29.65 C
ATOM 12 O2' A B2041 46.796 128.375 101.204 1.00 30.76 O
ATOM 13 C1' A B2041 48.148 129.925 102.431 1.00 30.55 C
ATOM 14 N9 A B2041 48.904 131.163 102.213 1.00 31.08 N
ATOM 15 C8 A B2041 50.161 131.488 102.668 1.00 31.44 C
ATOM 16 N7 A B2041 50.562 132.684 102.311 1.00 31.08 N
ATOM 17 C5 A B2041 49.503 133.179 101.565 1.00 31.25 C
ATOM 18 C6 A B2041 49.307 134.400 100.898 1.00 31.32 C
ATOM 19 N6 A B2041 50.220 135.376 100.850 1.00 27.78 N
ATOM 20 N1 A B2041 48.125 134.585 100.267 1.00 30.18 N
ATOM 21 C2 A B2041 47.222 133.600 100.295 1.00 28.46 C
ATOM 22 N3 A B2041 47.295 132.408 100.871 1.00 29.66 N
ATOM 23 C4 A B2041 48.473 132.256 101.499 1.00 30.87 C
ATOM 24 P A B2042 49.639 126.324 99.573 1.00 33.23 P
ATOM 25 OP1 A B2042 49.669 127.515 98.671 1.00 33.90 O
ATOM 26 OP2 A B2042 48.991 125.078 99.112 1.00 32.23 O
ATOM 27 O5' A B2042 51.123 125.964 100.034 1.00 31.58 O
TER
ATOM 2 P A A2453 61.307 134.216 104.598 1.00 28.79 P
ATOM 3 OP1 A A2453 60.599 133.804 105.832 1.00 26.93 O
ATOM 4 OP2 A A2453 61.387 133.282 103.461 1.00 31.27 O
ATOM 5 O5' A A2453 60.642 135.571 104.077 1.00 32.49 O
ATOM 6 C5' A A2453 61.251 136.348 103.019 1.00 30.88 C
ATOM 7 C4' A A2453 60.198 137.089 102.216 1.00 31.28 C
ATOM 8 O4' A A2453 59.268 136.140 101.626 1.00 33.20 O
ATOM 9 C3' A A2453 59.276 138.036 102.960 1.00 31.75 C
ATOM 10 O3' A A2453 59.859 139.298 103.221 1.00 34.58 O
ATOM 11 C2' A A2453 58.127 138.187 101.983 1.00 32.77 C
ATOM 12 O2' A A2453 58.485 139.048 100.922 1.00 32.20 O
ATOM 13 C1' A A2453 57.997 136.756 101.465 1.00 32.67 C
ATOM 14 N9 A A2453 56.992 135.971 102.185 1.00 31.05 N
ATOM 15 C8 A A2453 57.168 135.154 103.272 1.00 32.17 C
ATOM 16 N7 A A2453 56.071 134.559 103.670 1.00 31.22 N
ATOM 17 C5 A A2453 55.104 135.018 102.790 1.00 30.92 C
ATOM 18 C6 A A2453 53.724 134.747 102.665 1.00 29.58 C
ATOM 19 N6 A A2453 53.058 133.882 103.438 1.00 25.36 N
ATOM 20 N1 A A2453 53.048 135.391 101.692 1.00 28.42 N
ATOM 21 C2 A A2453 53.717 136.225 100.891 1.00 29.67 C
ATOM 22 N3 A A2453 55.008 136.544 100.893 1.00 31.90 N
ATOM 23 C4 A A2453 55.654 135.902 101.879 1.00 31.57 C
ATOM 24 P G A2454 60.016 139.770 104.737 1.00 32.98 P
ATOM 25 OP1 G A2454 58.646 139.913 105.285 1.00 31.04 O
ATOM 26 OP2 G A2454 60.939 140.923 104.784 1.00 32.45 O
ATOM 27 O5' G A2454 60.762 138.493 105.336 1.00 33.68 O
TER
ATOM 1 O3' G B2040 52.199 128.055 106.041 1.00 30.41 O
ATOM 2 P A B2041 52.666 127.938 104.503 1.00 29.61 P
ATOM 3 OP1 A B2041 53.086 126.533 104.304 1.00 28.65 O
ATOM 4 OP2 A B2041 53.612 129.038 104.172 1.00 30.74 O
ATOM 5 O5' A B2041 51.333 128.184 103.672 1.00 29.55 O
ATOM 6 C5' A B2041 50.206 127.311 103.822 1.00 28.12 C
ATOM 7 C4' A B2041 49.022 127.847 103.063 1.00 28.28 C
ATOM 8 O4' A B2041 48.740 129.200 103.501 1.00 29.37 O
ATOM 9 C3' A B2041 49.171 127.978 101.556 1.00 28.94 C
ATOM 10 O3' A B2041 48.897 126.732 100.936 1.00 30.70 O
ATOM 11 C2' A B2041 48.078 128.984 101.221 1.00 29.65 C
ATOM 12 O2' A B2041 46.796 128.375 101.204 1.00 30.76 O
ATOM 13 C1' A B2041 48.148 129.925 102.431 1.00 30.55 C
ATOM 14 N9 A B2041 48.904 131.163 102.213 1.00 31.08 N
ATOM 15 C8 A B2041 50.161 131.488 102.668 1.00 31.44 C
ATOM 16 N7 A B2041 50.562 132.684 102.311 1.00 31.08 N
ATOM 17 C5 A B2041 49.503 133.179 101.565 1.00 31.25 C
ATOM 18 C6 A B2041 49.307 134.400 100.898 1.00 31.32 C
ATOM 19 N6 A B2041 50.220 135.376 100.850 1.00 27.78 N
ATOM 20 N1 A B2041 48.125 134.585 100.267 1.00 30.18 N
ATOM 21 C2 A B2041 47.222 133.600 100.295 1.00 28.46 C
ATOM 22 N3 A B2041 47.295 132.408 100.871 1.00 29.66 N
ATOM 23 C4 A B2041 48.473 132.256 101.499 1.00 30.87 C
ATOM 24 P A B2042 49.639 126.324 99.573 1.00 33.23 P
ATOM 25 OP1 A B2042 49.669 127.515 98.671 1.00 33.90 O
ATOM 26 OP2 A B2042 48.991 125.078 99.112 1.00 32.23 O
ATOM 27 O5' A B2042 51.123 125.964 100.034 1.00 31.58 O
TER
Atoms:
OP1: (60.599,133.804,105.832)
OP2: (61.387,133.282,103.461)
C3': (59.276,138.036,102.960)
C1': (57.997,136.756,101.465)
C5': (61.251,136.348,103.019)
O4': (59.268,136.140,101.626)
C8: (57.168,135.154,103.272)
O2': (58.485,139.048,100.922)
C6: (53.724,134.747,102.665)
C5: (55.104,135.018,102.790)
C4: (55.654,135.902,101.879)
P: (61.307,134.216,104.598)
C4': (60.198,137.089,102.216)
C2': (58.127,138.187,101.983)
C2: (53.717,136.225,100.891)
N1: (53.048,135.391,101.692)
N3: (55.008,136.544,100.893)
N6: (53.058,133.882,103.438)
N7: (56.071,134.559,103.670)
N9: (56.992,135.971,102.185)
O5': (60.642,135.571,104.077)
O3': (59.859,139.298,103.221)
OP2: (61.387,133.282,103.461)
C3': (59.276,138.036,102.960)
C1': (57.997,136.756,101.465)
C5': (61.251,136.348,103.019)
O4': (59.268,136.140,101.626)
C8: (57.168,135.154,103.272)
O2': (58.485,139.048,100.922)
C6: (53.724,134.747,102.665)
C5: (55.104,135.018,102.790)
C4: (55.654,135.902,101.879)
P: (61.307,134.216,104.598)
C4': (60.198,137.089,102.216)
C2': (58.127,138.187,101.983)
C2: (53.717,136.225,100.891)
N1: (53.048,135.391,101.692)
N3: (55.008,136.544,100.893)
N6: (53.058,133.882,103.438)
N7: (56.071,134.559,103.670)
N9: (56.992,135.971,102.185)
O5': (60.642,135.571,104.077)
O3': (59.859,139.298,103.221)
OP1: (53.086,126.533,104.304)
OP2: (53.612,129.038,104.172)
C3': (49.171,127.978,101.556)
C1': (48.148,129.925,102.431)
C5': (50.206,127.311,103.822)
O4': (48.740,129.200,103.501)
C8: (50.161,131.488,102.668)
O2': (46.796,128.375,101.204)
C6: (49.307,134.400,100.898)
C5: (49.503,133.179,101.565)
C4: (48.473,132.256,101.499)
P: (52.666,127.938,104.503)
C4': (49.022,127.847,103.063)
C2': (48.078,128.984,101.221)
C2: (47.222,133.600,100.295)
N1: (48.125,134.585,100.267)
N3: (47.295,132.408,100.871)
N6: (50.220,135.376,100.850)
N7: (50.562,132.684,102.311)
N9: (48.904,131.163,102.213)
O5': (51.333,128.184,103.672)
O3': (48.897,126.732,100.936)
OP2: (53.612,129.038,104.172)
C3': (49.171,127.978,101.556)
C1': (48.148,129.925,102.431)
C5': (50.206,127.311,103.822)
O4': (48.740,129.200,103.501)
C8: (50.161,131.488,102.668)
O2': (46.796,128.375,101.204)
C6: (49.307,134.400,100.898)
C5: (49.503,133.179,101.565)
C4: (48.473,132.256,101.499)
P: (52.666,127.938,104.503)
C4': (49.022,127.847,103.063)
C2': (48.078,128.984,101.221)
C2: (47.222,133.600,100.295)
N1: (48.125,134.585,100.267)
N3: (47.295,132.408,100.871)
N6: (50.220,135.376,100.850)
N7: (50.562,132.684,102.311)
N9: (48.904,131.163,102.213)
O5': (51.333,128.184,103.672)
O3': (48.897,126.732,100.936)
Image (generated by PyMOL):