Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12030:12535
Extra
PDB:
ATOM 1 O3' A A2029 25.107 -68.213 112.821 1.00 67.86 O
ATOM 2 P A A2030 24.403 -66.795 112.585 1.00 74.12 P
ATOM 3 OP1 A A2030 23.106 -66.807 113.269 1.00 74.34 O
ATOM 4 OP2 A A2030 24.428 -66.515 111.155 1.00 73.65 O
ATOM 5 O5' A A2030 25.400 -65.831 113.347 1.00 73.97 O
ATOM 6 C5' A A2030 25.430 -64.448 113.063 1.00 73.44 C
ATOM 7 C4' A A2030 26.764 -64.008 112.520 1.00 73.12 C
ATOM 8 O4' A A2030 27.398 -65.083 111.796 1.00 73.27 O
ATOM 9 C3' A A2030 26.682 -62.891 111.520 1.00 72.50 C
ATOM 10 O3' A A2030 26.543 -61.640 112.139 1.00 72.27 O
ATOM 11 C2' A A2030 27.953 -63.051 110.699 1.00 72.31 C
ATOM 12 O2' A A2030 29.066 -62.494 111.381 1.00 72.30 O
ATOM 13 C1' A A2030 28.105 -64.569 110.686 1.00 72.80 C
ATOM 14 N9 A A2030 27.567 -65.192 109.453 1.00 72.71 N
ATOM 15 C8 A A2030 26.354 -65.784 109.263 1.00 72.88 C
ATOM 16 N7 A A2030 26.181 -66.301 108.075 1.00 72.77 N
ATOM 17 C5 A A2030 27.367 -66.041 107.437 1.00 72.51 C
ATOM 18 C6 A A2030 27.824 -66.325 106.154 1.00 72.30 C
ATOM 19 N6 A A2030 27.097 -66.961 105.256 1.00 72.33 N
ATOM 20 N1 A A2030 29.058 -65.948 105.797 1.00 72.07 N
ATOM 21 C2 A A2030 29.786 -65.319 106.711 1.00 72.06 C
ATOM 22 N3 A A2030 29.466 -64.986 107.953 1.00 72.25 N
ATOM 23 C4 A A2030 28.228 -65.371 108.261 1.00 72.46 C
ATOM 24 P A A2031 25.542 -60.582 111.518 1.00 62.43 P
ATOM 25 OP1 A A2031 25.373 -59.507 112.533 1.00 62.38 O
ATOM 26 OP2 A A2031 24.346 -61.318 111.046 1.00 62.56 O
ATOM 27 O5' A A2031 26.372 -60.049 110.265 1.00 61.92 O
TER
ATOM 1 O3' U B2534 31.864 -72.544 101.687 1.00 68.12 O
ATOM 2 P U B2535 31.601 -71.801 100.278 1.00 67.30 P
ATOM 3 OP1 U B2535 31.038 -72.821 99.340 1.00 67.52 O
ATOM 4 OP2 U B2535 32.854 -71.098 99.904 1.00 66.97 O
ATOM 5 O5' U B2535 30.499 -70.731 100.650 1.00 66.98 O
ATOM 6 C5' U B2535 30.678 -69.372 100.321 1.00 66.41 C
ATOM 7 C4' U B2535 29.981 -68.493 101.305 1.00 66.29 C
ATOM 8 O4' U B2535 30.687 -68.523 102.573 1.00 66.55 O
ATOM 9 C3' U B2535 29.928 -67.040 100.924 1.00 65.70 C
ATOM 10 O3' U B2535 28.845 -66.752 100.087 1.00 65.45 O
ATOM 11 C2' U B2535 29.884 -66.329 102.259 1.00 65.72 C
ATOM 12 O2' U B2535 28.584 -66.385 102.812 1.00 65.87 O
ATOM 13 C1' U B2535 30.808 -67.218 103.092 1.00 66.19 C
ATOM 14 N1 U B2535 32.231 -66.800 102.954 1.00 66.02 N
ATOM 15 C2 U B2535 32.605 -65.524 103.338 1.00 65.66 C
ATOM 16 O2 U B2535 31.832 -64.719 103.835 1.00 65.49 O
ATOM 17 N3 U B2535 33.927 -65.214 103.117 1.00 65.51 N
ATOM 18 C4 U B2535 34.885 -66.008 102.558 1.00 65.68 C
ATOM 19 O4 U B2535 36.019 -65.575 102.435 1.00 65.52 O
ATOM 20 C5 U B2535 34.435 -67.305 102.182 1.00 66.05 C
ATOM 21 C6 U B2535 33.161 -67.640 102.382 1.00 66.20 C
ATOM 22 P G B2536 29.130 -66.189 98.631 1.00 51.99 P
ATOM 23 OP1 G B2536 27.826 -65.921 97.967 1.00 51.80 O
ATOM 24 OP2 G B2536 30.075 -67.112 97.997 1.00 52.18 O
ATOM 25 O5' G B2536 29.837 -64.819 98.958 1.00 51.57 O
TER
ATOM 2 P A A2030 24.403 -66.795 112.585 1.00 74.12 P
ATOM 3 OP1 A A2030 23.106 -66.807 113.269 1.00 74.34 O
ATOM 4 OP2 A A2030 24.428 -66.515 111.155 1.00 73.65 O
ATOM 5 O5' A A2030 25.400 -65.831 113.347 1.00 73.97 O
ATOM 6 C5' A A2030 25.430 -64.448 113.063 1.00 73.44 C
ATOM 7 C4' A A2030 26.764 -64.008 112.520 1.00 73.12 C
ATOM 8 O4' A A2030 27.398 -65.083 111.796 1.00 73.27 O
ATOM 9 C3' A A2030 26.682 -62.891 111.520 1.00 72.50 C
ATOM 10 O3' A A2030 26.543 -61.640 112.139 1.00 72.27 O
ATOM 11 C2' A A2030 27.953 -63.051 110.699 1.00 72.31 C
ATOM 12 O2' A A2030 29.066 -62.494 111.381 1.00 72.30 O
ATOM 13 C1' A A2030 28.105 -64.569 110.686 1.00 72.80 C
ATOM 14 N9 A A2030 27.567 -65.192 109.453 1.00 72.71 N
ATOM 15 C8 A A2030 26.354 -65.784 109.263 1.00 72.88 C
ATOM 16 N7 A A2030 26.181 -66.301 108.075 1.00 72.77 N
ATOM 17 C5 A A2030 27.367 -66.041 107.437 1.00 72.51 C
ATOM 18 C6 A A2030 27.824 -66.325 106.154 1.00 72.30 C
ATOM 19 N6 A A2030 27.097 -66.961 105.256 1.00 72.33 N
ATOM 20 N1 A A2030 29.058 -65.948 105.797 1.00 72.07 N
ATOM 21 C2 A A2030 29.786 -65.319 106.711 1.00 72.06 C
ATOM 22 N3 A A2030 29.466 -64.986 107.953 1.00 72.25 N
ATOM 23 C4 A A2030 28.228 -65.371 108.261 1.00 72.46 C
ATOM 24 P A A2031 25.542 -60.582 111.518 1.00 62.43 P
ATOM 25 OP1 A A2031 25.373 -59.507 112.533 1.00 62.38 O
ATOM 26 OP2 A A2031 24.346 -61.318 111.046 1.00 62.56 O
ATOM 27 O5' A A2031 26.372 -60.049 110.265 1.00 61.92 O
TER
ATOM 1 O3' U B2534 31.864 -72.544 101.687 1.00 68.12 O
ATOM 2 P U B2535 31.601 -71.801 100.278 1.00 67.30 P
ATOM 3 OP1 U B2535 31.038 -72.821 99.340 1.00 67.52 O
ATOM 4 OP2 U B2535 32.854 -71.098 99.904 1.00 66.97 O
ATOM 5 O5' U B2535 30.499 -70.731 100.650 1.00 66.98 O
ATOM 6 C5' U B2535 30.678 -69.372 100.321 1.00 66.41 C
ATOM 7 C4' U B2535 29.981 -68.493 101.305 1.00 66.29 C
ATOM 8 O4' U B2535 30.687 -68.523 102.573 1.00 66.55 O
ATOM 9 C3' U B2535 29.928 -67.040 100.924 1.00 65.70 C
ATOM 10 O3' U B2535 28.845 -66.752 100.087 1.00 65.45 O
ATOM 11 C2' U B2535 29.884 -66.329 102.259 1.00 65.72 C
ATOM 12 O2' U B2535 28.584 -66.385 102.812 1.00 65.87 O
ATOM 13 C1' U B2535 30.808 -67.218 103.092 1.00 66.19 C
ATOM 14 N1 U B2535 32.231 -66.800 102.954 1.00 66.02 N
ATOM 15 C2 U B2535 32.605 -65.524 103.338 1.00 65.66 C
ATOM 16 O2 U B2535 31.832 -64.719 103.835 1.00 65.49 O
ATOM 17 N3 U B2535 33.927 -65.214 103.117 1.00 65.51 N
ATOM 18 C4 U B2535 34.885 -66.008 102.558 1.00 65.68 C
ATOM 19 O4 U B2535 36.019 -65.575 102.435 1.00 65.52 O
ATOM 20 C5 U B2535 34.435 -67.305 102.182 1.00 66.05 C
ATOM 21 C6 U B2535 33.161 -67.640 102.382 1.00 66.20 C
ATOM 22 P G B2536 29.130 -66.189 98.631 1.00 51.99 P
ATOM 23 OP1 G B2536 27.826 -65.921 97.967 1.00 51.80 O
ATOM 24 OP2 G B2536 30.075 -67.112 97.997 1.00 52.18 O
ATOM 25 O5' G B2536 29.837 -64.819 98.958 1.00 51.57 O
TER
Atoms:
OP1: (23.106,-66.807,113.269)
OP2: (24.428,-66.515,111.155)
C3': (26.682,-62.891,111.520)
C1': (28.105,-64.569,110.686)
C5': (25.430,-64.448,113.063)
O4': (27.398,-65.083,111.796)
C8: (26.354,-65.784,109.263)
O2': (29.066,-62.494,111.381)
C6: (27.824,-66.325,106.154)
C5: (27.367,-66.041,107.437)
C4: (28.228,-65.371,108.261)
P: (24.403,-66.795,112.585)
C4': (26.764,-64.008,112.520)
C2': (27.953,-63.051,110.699)
C2: (29.786,-65.319,106.711)
N1: (29.058,-65.948,105.797)
N3: (29.466,-64.986,107.953)
N6: (27.097,-66.961,105.256)
N7: (26.181,-66.301,108.075)
N9: (27.567,-65.192,109.453)
O5': (25.400,-65.831,113.347)
O3': (26.543,-61.640,112.139)
OP2: (24.428,-66.515,111.155)
C3': (26.682,-62.891,111.520)
C1': (28.105,-64.569,110.686)
C5': (25.430,-64.448,113.063)
O4': (27.398,-65.083,111.796)
C8: (26.354,-65.784,109.263)
O2': (29.066,-62.494,111.381)
C6: (27.824,-66.325,106.154)
C5: (27.367,-66.041,107.437)
C4: (28.228,-65.371,108.261)
P: (24.403,-66.795,112.585)
C4': (26.764,-64.008,112.520)
C2': (27.953,-63.051,110.699)
C2: (29.786,-65.319,106.711)
N1: (29.058,-65.948,105.797)
N3: (29.466,-64.986,107.953)
N6: (27.097,-66.961,105.256)
N7: (26.181,-66.301,108.075)
N9: (27.567,-65.192,109.453)
O5': (25.400,-65.831,113.347)
O3': (26.543,-61.640,112.139)
C4: (34.885,-66.008,102.558)
N3: (33.927,-65.214,103.117)
OP1: (31.038,-72.821,99.340)
OP2: (32.854,-71.098,99.904)
C2: (32.605,-65.524,103.338)
C1': (30.808,-67.218,103.092)
C3': (29.928,-67.040,100.924)
O5': (30.499,-70.731,100.650)
O4': (30.687,-68.523,102.573)
C5': (30.678,-69.372,100.321)
P: (31.601,-71.801,100.278)
C4': (29.981,-68.493,101.305)
C2': (29.884,-66.329,102.259)
O2': (28.584,-66.385,102.812)
N1: (32.231,-66.800,102.954)
O4: (36.019,-65.575,102.435)
O2: (31.832,-64.719,103.835)
C6: (33.161,-67.640,102.382)
C5: (34.435,-67.305,102.182)
O3': (28.845,-66.752,100.087)
N3: (33.927,-65.214,103.117)
OP1: (31.038,-72.821,99.340)
OP2: (32.854,-71.098,99.904)
C2: (32.605,-65.524,103.338)
C1': (30.808,-67.218,103.092)
C3': (29.928,-67.040,100.924)
O5': (30.499,-70.731,100.650)
O4': (30.687,-68.523,102.573)
C5': (30.678,-69.372,100.321)
P: (31.601,-71.801,100.278)
C4': (29.981,-68.493,101.305)
C2': (29.884,-66.329,102.259)
O2': (28.584,-66.385,102.812)
N1: (32.231,-66.800,102.954)
O4: (36.019,-65.575,102.435)
O2: (31.832,-64.719,103.835)
C6: (33.161,-67.640,102.382)
C5: (34.435,-67.305,102.182)
O3': (28.845,-66.752,100.087)
Image (generated by PyMOL):