Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1241:A448
Extra
PDB:
ATOM 1 O3' A A1240 -68.743 -87.802 44.877 1.00 0.01 O
ATOM 2 P G A1241 -67.830 -86.548 45.247 1.00 0.01 P
ATOM 3 OP1 G A1241 -66.664 -87.069 45.946 1.00 0.01 O
ATOM 4 OP2 G A1241 -68.692 -85.571 45.936 1.00 0.01 O
ATOM 5 O5' G A1241 -67.390 -85.983 43.842 1.00 0.01 O
ATOM 6 C5' G A1241 -68.353 -85.643 42.871 1.00 0.01 C
ATOM 7 C4' G A1241 -67.717 -85.434 41.538 1.00 0.01 C
ATOM 8 O4' G A1241 -66.451 -84.783 41.738 1.00 0.01 O
ATOM 9 C3' G A1241 -67.418 -86.706 40.753 1.00 0.01 C
ATOM 10 O3' G A1241 -67.566 -86.456 39.377 1.00 0.01 O
ATOM 11 C2' G A1241 -65.947 -86.940 41.015 1.00 0.01 C
ATOM 12 O2' G A1241 -65.293 -87.630 39.972 1.00 0.01 O
ATOM 13 C1' G A1241 -65.428 -85.528 41.129 1.00 0.01 C
ATOM 14 N9 G A1241 -64.245 -85.406 41.946 1.00 0.01 N
ATOM 15 C8 G A1241 -64.044 -85.989 43.147 1.00 0.01 C
ATOM 16 N7 G A1241 -62.902 -85.673 43.665 1.00 0.01 N
ATOM 17 C5 G A1241 -62.334 -84.823 42.737 1.00 0.01 C
ATOM 18 C6 G A1241 -61.100 -84.155 42.755 1.00 0.01 C
ATOM 19 O6 G A1241 -60.251 -84.210 43.647 1.00 0.01 O
ATOM 20 N1 G A1241 -60.906 -83.376 41.626 1.00 0.01 N
ATOM 21 C2 G A1241 -61.806 -83.251 40.599 1.00 0.01 C
ATOM 22 N2 G A1241 -61.482 -82.452 39.566 1.00 0.01 N
ATOM 23 N3 G A1241 -62.964 -83.877 40.588 1.00 0.01 N
ATOM 24 C4 G A1241 -63.155 -84.643 41.673 1.00 0.01 C
ATOM 25 P U A1242 -68.985 -86.458 38.691 1.00 0.01 P
ATOM 26 OP1 U A1242 -68.776 -85.865 37.352 1.00 0.01 O
ATOM 27 OP2 U A1242 -69.949 -85.854 39.609 1.00 0.01 O
ATOM 28 O5' U A1242 -69.284 -87.962 38.587 1.00 0.01 O
TER
ATOM 1 O3' U B 447 -55.698 -81.382 34.257 1.00 0.01 O
ATOM 2 P A B 448 -55.783 -80.719 35.698 1.00 0.01 P
ATOM 3 OP1 A B 448 -56.930 -79.823 35.673 1.00 0.01 O
ATOM 4 OP2 A B 448 -54.473 -80.177 35.994 1.00 0.01 O
ATOM 5 O5' A B 448 -56.066 -81.943 36.661 1.00 0.01 O
ATOM 6 C5' A B 448 -57.379 -82.426 36.849 1.00 0.01 C
ATOM 7 C4' A B 448 -57.455 -83.421 37.970 1.00 0.01 C
ATOM 8 O4' A B 448 -56.436 -84.422 37.805 1.00 0.01 O
ATOM 9 C3' A B 448 -57.211 -82.872 39.344 1.00 0.01 C
ATOM 10 O3' A B 448 -58.359 -82.254 39.901 1.00 0.01 O
ATOM 11 C2' A B 448 -56.742 -84.098 40.101 1.00 0.01 C
ATOM 12 O2' A B 448 -57.832 -84.914 40.430 1.00 0.01 O
ATOM 13 C1' A B 448 -55.927 -84.809 39.042 1.00 0.01 C
ATOM 14 N9 A B 448 -54.509 -84.427 39.080 1.00 0.01 N
ATOM 15 C8 A B 448 -53.891 -83.619 38.171 1.00 0.01 C
ATOM 16 N7 A B 448 -52.623 -83.413 38.394 1.00 0.01 N
ATOM 17 C5 A B 448 -52.390 -84.138 39.526 1.00 0.01 C
ATOM 18 C6 A B 448 -51.228 -84.321 40.264 1.00 0.01 C
ATOM 19 N6 A B 448 -50.070 -83.742 39.927 1.00 0.01 N
ATOM 20 N1 A B 448 -51.287 -85.108 41.362 1.00 0.01 N
ATOM 21 C2 A B 448 -52.454 -85.656 41.667 1.00 0.01 C
ATOM 22 N3 A B 448 -53.610 -85.544 41.037 1.00 0.01 N
ATOM 23 C4 A B 448 -53.521 -84.769 39.963 1.00 0.01 C
ATOM 24 P G B 449 -58.212 -80.882 40.702 1.00 0.01 P
ATOM 25 OP1 G B 449 -59.485 -80.627 41.381 1.00 0.01 O
ATOM 26 OP2 G B 449 -57.703 -79.899 39.771 1.00 0.01 O
ATOM 27 O5' G B 449 -57.107 -81.220 41.761 1.00 0.01 O
TER
ATOM 2 P G A1241 -67.830 -86.548 45.247 1.00 0.01 P
ATOM 3 OP1 G A1241 -66.664 -87.069 45.946 1.00 0.01 O
ATOM 4 OP2 G A1241 -68.692 -85.571 45.936 1.00 0.01 O
ATOM 5 O5' G A1241 -67.390 -85.983 43.842 1.00 0.01 O
ATOM 6 C5' G A1241 -68.353 -85.643 42.871 1.00 0.01 C
ATOM 7 C4' G A1241 -67.717 -85.434 41.538 1.00 0.01 C
ATOM 8 O4' G A1241 -66.451 -84.783 41.738 1.00 0.01 O
ATOM 9 C3' G A1241 -67.418 -86.706 40.753 1.00 0.01 C
ATOM 10 O3' G A1241 -67.566 -86.456 39.377 1.00 0.01 O
ATOM 11 C2' G A1241 -65.947 -86.940 41.015 1.00 0.01 C
ATOM 12 O2' G A1241 -65.293 -87.630 39.972 1.00 0.01 O
ATOM 13 C1' G A1241 -65.428 -85.528 41.129 1.00 0.01 C
ATOM 14 N9 G A1241 -64.245 -85.406 41.946 1.00 0.01 N
ATOM 15 C8 G A1241 -64.044 -85.989 43.147 1.00 0.01 C
ATOM 16 N7 G A1241 -62.902 -85.673 43.665 1.00 0.01 N
ATOM 17 C5 G A1241 -62.334 -84.823 42.737 1.00 0.01 C
ATOM 18 C6 G A1241 -61.100 -84.155 42.755 1.00 0.01 C
ATOM 19 O6 G A1241 -60.251 -84.210 43.647 1.00 0.01 O
ATOM 20 N1 G A1241 -60.906 -83.376 41.626 1.00 0.01 N
ATOM 21 C2 G A1241 -61.806 -83.251 40.599 1.00 0.01 C
ATOM 22 N2 G A1241 -61.482 -82.452 39.566 1.00 0.01 N
ATOM 23 N3 G A1241 -62.964 -83.877 40.588 1.00 0.01 N
ATOM 24 C4 G A1241 -63.155 -84.643 41.673 1.00 0.01 C
ATOM 25 P U A1242 -68.985 -86.458 38.691 1.00 0.01 P
ATOM 26 OP1 U A1242 -68.776 -85.865 37.352 1.00 0.01 O
ATOM 27 OP2 U A1242 -69.949 -85.854 39.609 1.00 0.01 O
ATOM 28 O5' U A1242 -69.284 -87.962 38.587 1.00 0.01 O
TER
ATOM 1 O3' U B 447 -55.698 -81.382 34.257 1.00 0.01 O
ATOM 2 P A B 448 -55.783 -80.719 35.698 1.00 0.01 P
ATOM 3 OP1 A B 448 -56.930 -79.823 35.673 1.00 0.01 O
ATOM 4 OP2 A B 448 -54.473 -80.177 35.994 1.00 0.01 O
ATOM 5 O5' A B 448 -56.066 -81.943 36.661 1.00 0.01 O
ATOM 6 C5' A B 448 -57.379 -82.426 36.849 1.00 0.01 C
ATOM 7 C4' A B 448 -57.455 -83.421 37.970 1.00 0.01 C
ATOM 8 O4' A B 448 -56.436 -84.422 37.805 1.00 0.01 O
ATOM 9 C3' A B 448 -57.211 -82.872 39.344 1.00 0.01 C
ATOM 10 O3' A B 448 -58.359 -82.254 39.901 1.00 0.01 O
ATOM 11 C2' A B 448 -56.742 -84.098 40.101 1.00 0.01 C
ATOM 12 O2' A B 448 -57.832 -84.914 40.430 1.00 0.01 O
ATOM 13 C1' A B 448 -55.927 -84.809 39.042 1.00 0.01 C
ATOM 14 N9 A B 448 -54.509 -84.427 39.080 1.00 0.01 N
ATOM 15 C8 A B 448 -53.891 -83.619 38.171 1.00 0.01 C
ATOM 16 N7 A B 448 -52.623 -83.413 38.394 1.00 0.01 N
ATOM 17 C5 A B 448 -52.390 -84.138 39.526 1.00 0.01 C
ATOM 18 C6 A B 448 -51.228 -84.321 40.264 1.00 0.01 C
ATOM 19 N6 A B 448 -50.070 -83.742 39.927 1.00 0.01 N
ATOM 20 N1 A B 448 -51.287 -85.108 41.362 1.00 0.01 N
ATOM 21 C2 A B 448 -52.454 -85.656 41.667 1.00 0.01 C
ATOM 22 N3 A B 448 -53.610 -85.544 41.037 1.00 0.01 N
ATOM 23 C4 A B 448 -53.521 -84.769 39.963 1.00 0.01 C
ATOM 24 P G B 449 -58.212 -80.882 40.702 1.00 0.01 P
ATOM 25 OP1 G B 449 -59.485 -80.627 41.381 1.00 0.01 O
ATOM 26 OP2 G B 449 -57.703 -79.899 39.771 1.00 0.01 O
ATOM 27 O5' G B 449 -57.107 -81.220 41.761 1.00 0.01 O
TER
Atoms:
OP1: (-66.664,-87.069,45.946)
OP2: (-68.692,-85.571,45.936)
C3': (-67.418,-86.706,40.753)
C1': (-65.428,-85.528,41.129)
C5': (-68.353,-85.643,42.871)
O6: (-60.251,-84.210,43.647)
O4': (-66.451,-84.783,41.738)
C8: (-64.044,-85.989,43.147)
C2: (-61.806,-83.251,40.599)
C6: (-61.100,-84.155,42.755)
C5: (-62.334,-84.823,42.737)
C4: (-63.155,-84.643,41.673)
P: (-67.830,-86.548,45.247)
C4': (-67.717,-85.434,41.538)
C2': (-65.947,-86.940,41.015)
O2': (-65.293,-87.630,39.972)
N1: (-60.906,-83.376,41.626)
N2: (-61.482,-82.452,39.566)
N3: (-62.964,-83.877,40.588)
N7: (-62.902,-85.673,43.665)
N9: (-64.245,-85.406,41.946)
O5': (-67.390,-85.983,43.842)
O3': (-67.566,-86.456,39.377)
OP2: (-68.692,-85.571,45.936)
C3': (-67.418,-86.706,40.753)
C1': (-65.428,-85.528,41.129)
C5': (-68.353,-85.643,42.871)
O6: (-60.251,-84.210,43.647)
O4': (-66.451,-84.783,41.738)
C8: (-64.044,-85.989,43.147)
C2: (-61.806,-83.251,40.599)
C6: (-61.100,-84.155,42.755)
C5: (-62.334,-84.823,42.737)
C4: (-63.155,-84.643,41.673)
P: (-67.830,-86.548,45.247)
C4': (-67.717,-85.434,41.538)
C2': (-65.947,-86.940,41.015)
O2': (-65.293,-87.630,39.972)
N1: (-60.906,-83.376,41.626)
N2: (-61.482,-82.452,39.566)
N3: (-62.964,-83.877,40.588)
N7: (-62.902,-85.673,43.665)
N9: (-64.245,-85.406,41.946)
O5': (-67.390,-85.983,43.842)
O3': (-67.566,-86.456,39.377)
OP1: (-56.930,-79.823,35.673)
OP2: (-54.473,-80.177,35.994)
C3': (-57.211,-82.872,39.344)
C1': (-55.927,-84.809,39.042)
C5': (-57.379,-82.426,36.849)
O4': (-56.436,-84.422,37.805)
C8: (-53.891,-83.619,38.171)
O2': (-57.832,-84.914,40.430)
C6: (-51.228,-84.321,40.264)
C5: (-52.390,-84.138,39.526)
C4: (-53.521,-84.769,39.963)
P: (-55.783,-80.719,35.698)
C4': (-57.455,-83.421,37.970)
C2': (-56.742,-84.098,40.101)
C2: (-52.454,-85.656,41.667)
N1: (-51.287,-85.108,41.362)
N3: (-53.610,-85.544,41.037)
N6: (-50.070,-83.742,39.927)
N7: (-52.623,-83.413,38.394)
N9: (-54.509,-84.427,39.080)
O5': (-56.066,-81.943,36.661)
O3': (-58.359,-82.254,39.901)
OP2: (-54.473,-80.177,35.994)
C3': (-57.211,-82.872,39.344)
C1': (-55.927,-84.809,39.042)
C5': (-57.379,-82.426,36.849)
O4': (-56.436,-84.422,37.805)
C8: (-53.891,-83.619,38.171)
O2': (-57.832,-84.914,40.430)
C6: (-51.228,-84.321,40.264)
C5: (-52.390,-84.138,39.526)
C4: (-53.521,-84.769,39.963)
P: (-55.783,-80.719,35.698)
C4': (-57.455,-83.421,37.970)
C2': (-56.742,-84.098,40.101)
C2: (-52.454,-85.656,41.667)
N1: (-51.287,-85.108,41.362)
N3: (-53.610,-85.544,41.037)
N6: (-50.070,-83.742,39.927)
N7: (-52.623,-83.413,38.394)
N9: (-54.509,-84.427,39.080)
O5': (-56.066,-81.943,36.661)
O3': (-58.359,-82.254,39.901)
Image (generated by PyMOL):