Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8W:B14:B13
Extra
PDB:
ATOM 1 O3' U A 13 2.079 6.539 41.682 1.00 26.12 O
ATOM 2 P C A 14 1.688 7.788 42.620 1.00 24.53 P
ATOM 3 OP1 C A 14 0.554 8.454 41.944 1.00 27.41 O
ATOM 4 OP2 C A 14 2.921 8.564 42.916 1.00 22.25 O
ATOM 5 O5' C A 14 1.162 7.122 43.974 1.00 22.61 O
ATOM 6 C5' C A 14 0.053 6.221 43.954 1.00 24.46 C
ATOM 7 C4' C A 14 -0.301 5.721 45.350 1.00 26.18 C
ATOM 8 O4' C A 14 0.751 4.866 45.877 1.00 25.97 O
ATOM 9 C3' C A 14 -0.425 6.881 46.340 1.00 26.16 C
ATOM 10 O3' C A 14 -1.561 6.737 47.189 1.00 26.02 O
ATOM 11 C2' C A 14 0.900 6.924 47.101 1.00 24.85 C
ATOM 12 O2' C A 14 0.739 7.251 48.463 1.00 25.78 O
ATOM 13 C1' C A 14 1.324 5.460 47.022 1.00 27.77 C
ATOM 14 N1 C A 14 2.735 5.076 47.172 1.00 28.44 N
ATOM 15 C2 C A 14 3.063 4.165 48.188 1.00 34.79 C
ATOM 16 O2 C A 14 2.154 3.706 48.897 1.00 33.70 O
ATOM 17 N3 C A 14 4.354 3.809 48.370 1.00 33.62 N
ATOM 18 C4 C A 14 5.300 4.324 47.584 1.00 36.29 C
ATOM 19 N4 C A 14 6.564 3.946 47.798 1.00 40.18 N
ATOM 20 C5 C A 14 4.994 5.248 46.540 1.00 36.02 C
ATOM 21 C6 C A 14 3.709 5.590 46.369 1.00 33.12 C
ATOM 22 P C A 15 -2.920 7.515 46.870 1.00 25.84 P
ATOM 23 OP1 C A 15 -3.962 6.928 47.753 1.00 27.92 O
ATOM 24 OP2 C A 15 -3.122 7.534 45.397 1.00 26.40 O
ATOM 25 O5' C A 15 -2.638 8.995 47.365 1.00 22.88 O
TER
ATOM 1 O3' A B 12 6.618 7.091 44.751 1.00 32.93 O
ATOM 2 P U B 13 6.922 6.760 43.211 1.00 41.94 P
ATOM 3 OP1 U B 13 7.546 5.414 43.192 1.00 45.90 O
ATOM 4 OP2 U B 13 7.632 7.908 42.600 1.00 41.14 O
ATOM 5 O5' U B 13 5.465 6.664 42.579 1.00 39.38 O
ATOM 6 C5' U B 13 5.255 6.376 41.202 1.00 36.42 C
ATOM 7 C4' U B 13 4.120 5.396 41.069 1.00 37.26 C
ATOM 8 O4' U B 13 4.614 4.046 41.272 1.00 42.77 O
ATOM 9 C3' U B 13 3.038 5.584 42.123 1.00 34.91 C
ATOM 10 O3' U B 13 2.079 6.539 41.682 1.00 26.12 O
ATOM 11 C2' U B 13 2.432 4.188 42.221 1.00 37.72 C
ATOM 12 O2' U B 13 1.495 3.940 41.194 1.00 40.74 O
ATOM 13 C1' U B 13 3.657 3.296 42.001 1.00 44.80 C
ATOM 14 N1 U B 13 4.297 2.787 43.224 1.00 51.14 N
ATOM 15 C2 U B 13 3.556 1.956 44.050 1.00 54.43 C
ATOM 16 O2 U B 13 2.398 1.649 43.818 1.00 57.95 O
ATOM 17 N3 U B 13 4.224 1.495 45.158 1.00 56.37 N
ATOM 18 C4 U B 13 5.526 1.773 45.520 1.00 55.86 C
ATOM 19 O4 U B 13 5.988 1.275 46.548 1.00 57.26 O
ATOM 20 C5 U B 13 6.222 2.645 44.623 1.00 56.01 C
ATOM 21 C6 U B 13 5.598 3.112 43.535 1.00 52.95 C
ATOM 22 P C B 14 1.688 7.788 42.620 1.00 24.53 P
ATOM 23 OP1 C B 14 0.554 8.454 41.944 1.00 27.41 O
ATOM 24 OP2 C B 14 2.921 8.564 42.916 1.00 22.25 O
ATOM 25 O5' C B 14 1.162 7.122 43.974 1.00 22.61 O
TER
ATOM 2 P C A 14 1.688 7.788 42.620 1.00 24.53 P
ATOM 3 OP1 C A 14 0.554 8.454 41.944 1.00 27.41 O
ATOM 4 OP2 C A 14 2.921 8.564 42.916 1.00 22.25 O
ATOM 5 O5' C A 14 1.162 7.122 43.974 1.00 22.61 O
ATOM 6 C5' C A 14 0.053 6.221 43.954 1.00 24.46 C
ATOM 7 C4' C A 14 -0.301 5.721 45.350 1.00 26.18 C
ATOM 8 O4' C A 14 0.751 4.866 45.877 1.00 25.97 O
ATOM 9 C3' C A 14 -0.425 6.881 46.340 1.00 26.16 C
ATOM 10 O3' C A 14 -1.561 6.737 47.189 1.00 26.02 O
ATOM 11 C2' C A 14 0.900 6.924 47.101 1.00 24.85 C
ATOM 12 O2' C A 14 0.739 7.251 48.463 1.00 25.78 O
ATOM 13 C1' C A 14 1.324 5.460 47.022 1.00 27.77 C
ATOM 14 N1 C A 14 2.735 5.076 47.172 1.00 28.44 N
ATOM 15 C2 C A 14 3.063 4.165 48.188 1.00 34.79 C
ATOM 16 O2 C A 14 2.154 3.706 48.897 1.00 33.70 O
ATOM 17 N3 C A 14 4.354 3.809 48.370 1.00 33.62 N
ATOM 18 C4 C A 14 5.300 4.324 47.584 1.00 36.29 C
ATOM 19 N4 C A 14 6.564 3.946 47.798 1.00 40.18 N
ATOM 20 C5 C A 14 4.994 5.248 46.540 1.00 36.02 C
ATOM 21 C6 C A 14 3.709 5.590 46.369 1.00 33.12 C
ATOM 22 P C A 15 -2.920 7.515 46.870 1.00 25.84 P
ATOM 23 OP1 C A 15 -3.962 6.928 47.753 1.00 27.92 O
ATOM 24 OP2 C A 15 -3.122 7.534 45.397 1.00 26.40 O
ATOM 25 O5' C A 15 -2.638 8.995 47.365 1.00 22.88 O
TER
ATOM 1 O3' A B 12 6.618 7.091 44.751 1.00 32.93 O
ATOM 2 P U B 13 6.922 6.760 43.211 1.00 41.94 P
ATOM 3 OP1 U B 13 7.546 5.414 43.192 1.00 45.90 O
ATOM 4 OP2 U B 13 7.632 7.908 42.600 1.00 41.14 O
ATOM 5 O5' U B 13 5.465 6.664 42.579 1.00 39.38 O
ATOM 6 C5' U B 13 5.255 6.376 41.202 1.00 36.42 C
ATOM 7 C4' U B 13 4.120 5.396 41.069 1.00 37.26 C
ATOM 8 O4' U B 13 4.614 4.046 41.272 1.00 42.77 O
ATOM 9 C3' U B 13 3.038 5.584 42.123 1.00 34.91 C
ATOM 10 O3' U B 13 2.079 6.539 41.682 1.00 26.12 O
ATOM 11 C2' U B 13 2.432 4.188 42.221 1.00 37.72 C
ATOM 12 O2' U B 13 1.495 3.940 41.194 1.00 40.74 O
ATOM 13 C1' U B 13 3.657 3.296 42.001 1.00 44.80 C
ATOM 14 N1 U B 13 4.297 2.787 43.224 1.00 51.14 N
ATOM 15 C2 U B 13 3.556 1.956 44.050 1.00 54.43 C
ATOM 16 O2 U B 13 2.398 1.649 43.818 1.00 57.95 O
ATOM 17 N3 U B 13 4.224 1.495 45.158 1.00 56.37 N
ATOM 18 C4 U B 13 5.526 1.773 45.520 1.00 55.86 C
ATOM 19 O4 U B 13 5.988 1.275 46.548 1.00 57.26 O
ATOM 20 C5 U B 13 6.222 2.645 44.623 1.00 56.01 C
ATOM 21 C6 U B 13 5.598 3.112 43.535 1.00 52.95 C
ATOM 22 P C B 14 1.688 7.788 42.620 1.00 24.53 P
ATOM 23 OP1 C B 14 0.554 8.454 41.944 1.00 27.41 O
ATOM 24 OP2 C B 14 2.921 8.564 42.916 1.00 22.25 O
ATOM 25 O5' C B 14 1.162 7.122 43.974 1.00 22.61 O
TER
Atoms:
C2: (3.063,4.165,48.188)
OP1: (0.554,8.454,41.944)
OP2: (2.921,8.564,42.916)
C4: (5.300,4.324,47.584)
O5': (1.162,7.122,43.974)
C3': (-0.425,6.881,46.340)
C1': (1.324,5.460,47.022)
O4': (0.751,4.866,45.877)
C5': (0.053,6.221,43.954)
P: (1.688,7.788,42.620)
O2: (2.154,3.706,48.897)
C4': (-0.301,5.721,45.350)
C2': (0.900,6.924,47.101)
O2': (0.739,7.251,48.463)
N1: (2.735,5.076,47.172)
N3: (4.354,3.809,48.370)
N4: (6.564,3.946,47.798)
C6: (3.709,5.590,46.369)
C5: (4.994,5.248,46.540)
O3': (-1.561,6.737,47.189)
OP1: (0.554,8.454,41.944)
OP2: (2.921,8.564,42.916)
C4: (5.300,4.324,47.584)
O5': (1.162,7.122,43.974)
C3': (-0.425,6.881,46.340)
C1': (1.324,5.460,47.022)
O4': (0.751,4.866,45.877)
C5': (0.053,6.221,43.954)
P: (1.688,7.788,42.620)
O2: (2.154,3.706,48.897)
C4': (-0.301,5.721,45.350)
C2': (0.900,6.924,47.101)
O2': (0.739,7.251,48.463)
N1: (2.735,5.076,47.172)
N3: (4.354,3.809,48.370)
N4: (6.564,3.946,47.798)
C6: (3.709,5.590,46.369)
C5: (4.994,5.248,46.540)
O3': (-1.561,6.737,47.189)
C4: (5.526,1.773,45.520)
N3: (4.224,1.495,45.158)
OP1: (7.546,5.414,43.192)
OP2: (7.632,7.908,42.600)
C2: (3.556,1.956,44.050)
C1': (3.657,3.296,42.001)
C3': (3.038,5.584,42.123)
O5': (5.465,6.664,42.579)
O4': (4.614,4.046,41.272)
C5': (5.255,6.376,41.202)
P: (6.922,6.760,43.211)
C4': (4.120,5.396,41.069)
C2': (2.432,4.188,42.221)
O2': (1.495,3.940,41.194)
N1: (4.297,2.787,43.224)
O4: (5.988,1.275,46.548)
O2: (2.398,1.649,43.818)
C6: (5.598,3.112,43.535)
C5: (6.222,2.645,44.623)
O3': (2.079,6.539,41.682)
N3: (4.224,1.495,45.158)
OP1: (7.546,5.414,43.192)
OP2: (7.632,7.908,42.600)
C2: (3.556,1.956,44.050)
C1': (3.657,3.296,42.001)
C3': (3.038,5.584,42.123)
O5': (5.465,6.664,42.579)
O4': (4.614,4.046,41.272)
C5': (5.255,6.376,41.202)
P: (6.922,6.760,43.211)
C4': (4.120,5.396,41.069)
C2': (2.432,4.188,42.221)
O2': (1.495,3.940,41.194)
N1: (4.297,2.787,43.224)
O4: (5.988,1.275,46.548)
O2: (2.398,1.649,43.818)
C6: (5.598,3.112,43.535)
C5: (6.222,2.645,44.623)
O3': (2.079,6.539,41.682)
Image (generated by PyMOL):