Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A127:A126
Extra
PDB:
ATOM 1 O3' U A 126 94.168 145.689 7.302 1.00 87.59 O
ATOM 2 P C A 127 95.532 145.217 8.003 1.00 86.93 P
ATOM 3 OP1 C A 127 96.253 146.479 8.284 1.00 87.10 O
ATOM 4 OP2 C A 127 96.198 144.155 7.207 1.00 87.21 O
ATOM 5 O5' C A 127 95.070 144.604 9.397 1.00 86.32 O
ATOM 6 C5' C A 127 94.477 145.442 10.400 1.00 83.60 C
ATOM 7 C4' C A 127 94.966 145.045 11.768 1.00 82.40 C
ATOM 8 O4' C A 127 94.578 143.673 12.012 1.00 82.12 O
ATOM 9 C3' C A 127 96.477 145.108 12.002 1.00 81.71 C
ATOM 10 O3' C A 127 96.713 145.423 13.364 1.00 79.52 O
ATOM 11 C2' C A 127 96.917 143.670 11.774 1.00 81.90 C
ATOM 12 O2' C A 127 98.100 143.358 12.489 1.00 81.29 O
ATOM 13 C1' C A 127 95.720 142.921 12.351 1.00 82.26 C
ATOM 14 N1 C A 127 95.550 141.571 11.819 1.00 82.66 N
ATOM 15 C2 C A 127 95.934 140.497 12.614 1.00 83.47 C
ATOM 16 O2 C A 127 96.396 140.721 13.747 1.00 84.05 O
ATOM 17 N3 C A 127 95.789 139.243 12.138 1.00 84.17 N
ATOM 18 C4 C A 127 95.276 139.047 10.920 1.00 84.07 C
ATOM 19 N4 C A 127 95.147 137.791 10.495 1.00 84.16 N
ATOM 20 C5 C A 127 94.873 140.130 10.088 1.00 83.46 C
ATOM 21 C6 C A 127 95.026 141.363 10.572 1.00 82.61 C
ATOM 22 P G A 128 96.963 146.945 13.787 1.00 78.41 P
ATOM 23 OP1 G A 128 97.969 147.494 12.834 1.00 78.64 O
ATOM 24 OP2 G A 128 97.245 146.963 15.244 1.00 78.46 O
ATOM 25 O5' G A 128 95.549 147.625 13.502 1.00 76.23 O
TER
ATOM 1 O3' U B 125 91.471 139.697 7.128 1.00 72.70 O
ATOM 2 P U B 126 92.909 140.120 6.505 1.00 76.46 P
ATOM 3 OP1 U B 126 92.756 139.905 5.048 1.00 75.65 O
ATOM 4 OP2 U B 126 94.003 139.419 7.238 1.00 76.26 O
ATOM 5 O5' U B 126 93.047 141.692 6.799 1.00 79.17 O
ATOM 6 C5' U B 126 94.005 142.541 6.084 1.00 83.89 C
ATOM 7 C4' U B 126 93.400 143.914 5.827 1.00 87.96 C
ATOM 8 O4' U B 126 92.113 143.707 5.196 1.00 91.25 O
ATOM 9 C3' U B 126 93.108 144.761 7.064 1.00 89.20 C
ATOM 10 O3' U B 126 94.168 145.689 7.302 1.00 87.59 O
ATOM 11 C2' U B 126 91.887 145.590 6.657 1.00 91.14 C
ATOM 12 O2' U B 126 92.193 146.813 6.024 1.00 91.68 O
ATOM 13 C1' U B 126 91.178 144.669 5.659 1.00 93.17 C
ATOM 14 N1 U B 126 89.977 143.960 6.138 1.00 97.08 N
ATOM 15 C2 U B 126 89.325 143.107 5.243 1.00 98.85 C
ATOM 16 O2 U B 126 89.650 142.990 4.062 1.00 98.13 O
ATOM 17 N3 U B 126 88.268 142.407 5.782 1.00100.34 N
ATOM 18 C4 U B 126 87.789 142.481 7.081 1.00100.84 C
ATOM 19 O4 U B 126 86.955 141.656 7.466 1.00102.46 O
ATOM 20 C5 U B 126 88.469 143.425 7.913 1.00100.24 C
ATOM 21 C6 U B 126 89.514 144.109 7.431 1.00 98.89 C
ATOM 22 P C B 127 95.532 145.217 8.003 1.00 86.93 P
ATOM 23 OP1 C B 127 96.253 146.479 8.284 1.00 87.10 O
ATOM 24 OP2 C B 127 96.198 144.155 7.207 1.00 87.21 O
ATOM 25 O5' C B 127 95.070 144.604 9.397 1.00 86.32 O
TER
ATOM 2 P C A 127 95.532 145.217 8.003 1.00 86.93 P
ATOM 3 OP1 C A 127 96.253 146.479 8.284 1.00 87.10 O
ATOM 4 OP2 C A 127 96.198 144.155 7.207 1.00 87.21 O
ATOM 5 O5' C A 127 95.070 144.604 9.397 1.00 86.32 O
ATOM 6 C5' C A 127 94.477 145.442 10.400 1.00 83.60 C
ATOM 7 C4' C A 127 94.966 145.045 11.768 1.00 82.40 C
ATOM 8 O4' C A 127 94.578 143.673 12.012 1.00 82.12 O
ATOM 9 C3' C A 127 96.477 145.108 12.002 1.00 81.71 C
ATOM 10 O3' C A 127 96.713 145.423 13.364 1.00 79.52 O
ATOM 11 C2' C A 127 96.917 143.670 11.774 1.00 81.90 C
ATOM 12 O2' C A 127 98.100 143.358 12.489 1.00 81.29 O
ATOM 13 C1' C A 127 95.720 142.921 12.351 1.00 82.26 C
ATOM 14 N1 C A 127 95.550 141.571 11.819 1.00 82.66 N
ATOM 15 C2 C A 127 95.934 140.497 12.614 1.00 83.47 C
ATOM 16 O2 C A 127 96.396 140.721 13.747 1.00 84.05 O
ATOM 17 N3 C A 127 95.789 139.243 12.138 1.00 84.17 N
ATOM 18 C4 C A 127 95.276 139.047 10.920 1.00 84.07 C
ATOM 19 N4 C A 127 95.147 137.791 10.495 1.00 84.16 N
ATOM 20 C5 C A 127 94.873 140.130 10.088 1.00 83.46 C
ATOM 21 C6 C A 127 95.026 141.363 10.572 1.00 82.61 C
ATOM 22 P G A 128 96.963 146.945 13.787 1.00 78.41 P
ATOM 23 OP1 G A 128 97.969 147.494 12.834 1.00 78.64 O
ATOM 24 OP2 G A 128 97.245 146.963 15.244 1.00 78.46 O
ATOM 25 O5' G A 128 95.549 147.625 13.502 1.00 76.23 O
TER
ATOM 1 O3' U B 125 91.471 139.697 7.128 1.00 72.70 O
ATOM 2 P U B 126 92.909 140.120 6.505 1.00 76.46 P
ATOM 3 OP1 U B 126 92.756 139.905 5.048 1.00 75.65 O
ATOM 4 OP2 U B 126 94.003 139.419 7.238 1.00 76.26 O
ATOM 5 O5' U B 126 93.047 141.692 6.799 1.00 79.17 O
ATOM 6 C5' U B 126 94.005 142.541 6.084 1.00 83.89 C
ATOM 7 C4' U B 126 93.400 143.914 5.827 1.00 87.96 C
ATOM 8 O4' U B 126 92.113 143.707 5.196 1.00 91.25 O
ATOM 9 C3' U B 126 93.108 144.761 7.064 1.00 89.20 C
ATOM 10 O3' U B 126 94.168 145.689 7.302 1.00 87.59 O
ATOM 11 C2' U B 126 91.887 145.590 6.657 1.00 91.14 C
ATOM 12 O2' U B 126 92.193 146.813 6.024 1.00 91.68 O
ATOM 13 C1' U B 126 91.178 144.669 5.659 1.00 93.17 C
ATOM 14 N1 U B 126 89.977 143.960 6.138 1.00 97.08 N
ATOM 15 C2 U B 126 89.325 143.107 5.243 1.00 98.85 C
ATOM 16 O2 U B 126 89.650 142.990 4.062 1.00 98.13 O
ATOM 17 N3 U B 126 88.268 142.407 5.782 1.00100.34 N
ATOM 18 C4 U B 126 87.789 142.481 7.081 1.00100.84 C
ATOM 19 O4 U B 126 86.955 141.656 7.466 1.00102.46 O
ATOM 20 C5 U B 126 88.469 143.425 7.913 1.00100.24 C
ATOM 21 C6 U B 126 89.514 144.109 7.431 1.00 98.89 C
ATOM 22 P C B 127 95.532 145.217 8.003 1.00 86.93 P
ATOM 23 OP1 C B 127 96.253 146.479 8.284 1.00 87.10 O
ATOM 24 OP2 C B 127 96.198 144.155 7.207 1.00 87.21 O
ATOM 25 O5' C B 127 95.070 144.604 9.397 1.00 86.32 O
TER
Atoms:
C2: (95.934,140.497,12.614)
OP1: (96.253,146.479,8.284)
OP2: (96.198,144.155,7.207)
C4: (95.276,139.047,10.920)
O5': (95.070,144.604,9.397)
C3': (96.477,145.108,12.002)
C1': (95.720,142.921,12.351)
O4': (94.578,143.673,12.012)
C5': (94.477,145.442,10.400)
P: (95.532,145.217,8.003)
O2: (96.396,140.721,13.747)
C4': (94.966,145.045,11.768)
C2': (96.917,143.670,11.774)
O2': (98.100,143.358,12.489)
N1: (95.550,141.571,11.819)
N3: (95.789,139.243,12.138)
N4: (95.147,137.791,10.495)
C6: (95.026,141.363,10.572)
C5: (94.873,140.130,10.088)
O3': (96.713,145.423,13.364)
OP1: (96.253,146.479,8.284)
OP2: (96.198,144.155,7.207)
C4: (95.276,139.047,10.920)
O5': (95.070,144.604,9.397)
C3': (96.477,145.108,12.002)
C1': (95.720,142.921,12.351)
O4': (94.578,143.673,12.012)
C5': (94.477,145.442,10.400)
P: (95.532,145.217,8.003)
O2: (96.396,140.721,13.747)
C4': (94.966,145.045,11.768)
C2': (96.917,143.670,11.774)
O2': (98.100,143.358,12.489)
N1: (95.550,141.571,11.819)
N3: (95.789,139.243,12.138)
N4: (95.147,137.791,10.495)
C6: (95.026,141.363,10.572)
C5: (94.873,140.130,10.088)
O3': (96.713,145.423,13.364)
C4: (87.789,142.481,7.081)
N3: (88.268,142.407,5.782)
OP1: (92.756,139.905,5.048)
OP2: (94.003,139.419,7.238)
C2: (89.325,143.107,5.243)
C1': (91.178,144.669,5.659)
C3': (93.108,144.761,7.064)
O5': (93.047,141.692,6.799)
O4': (92.113,143.707,5.196)
C5': (94.005,142.541,6.084)
P: (92.909,140.120,6.505)
C4': (93.400,143.914,5.827)
C2': (91.887,145.590,6.657)
O2': (92.193,146.813,6.024)
N1: (89.977,143.960,6.138)
O4: (86.955,141.656,7.466)
O2: (89.650,142.990,4.062)
C6: (89.514,144.109,7.431)
C5: (88.469,143.425,7.913)
O3': (94.168,145.689,7.302)
N3: (88.268,142.407,5.782)
OP1: (92.756,139.905,5.048)
OP2: (94.003,139.419,7.238)
C2: (89.325,143.107,5.243)
C1': (91.178,144.669,5.659)
C3': (93.108,144.761,7.064)
O5': (93.047,141.692,6.799)
O4': (92.113,143.707,5.196)
C5': (94.005,142.541,6.084)
P: (92.909,140.120,6.505)
C4': (93.400,143.914,5.827)
C2': (91.887,145.590,6.657)
O2': (92.193,146.813,6.024)
N1: (89.977,143.960,6.138)
O4: (86.955,141.656,7.466)
O2: (89.650,142.990,4.062)
C6: (89.514,144.109,7.431)
C5: (88.469,143.425,7.913)
O3': (94.168,145.689,7.302)
Image (generated by PyMOL):