Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1379:A1378
Extra
PDB:
ATOM 1 O3' U A1378 63.370 170.525 65.944 1.00 44.24 O
ATOM 2 P C A1379 63.097 172.046 65.507 1.00 44.96 P
ATOM 3 OP1 C A1379 63.063 172.832 66.765 1.00 44.23 O
ATOM 4 OP2 C A1379 61.946 172.127 64.586 1.00 44.17 O
ATOM 5 O5' C A1379 64.415 172.444 64.699 1.00 44.85 O
ATOM 6 C5' C A1379 65.674 172.644 65.393 1.00 45.73 C
ATOM 7 C4' C A1379 66.478 173.734 64.726 1.00 45.82 C
ATOM 8 O4' C A1379 66.949 173.242 63.448 1.00 45.83 O
ATOM 9 C3' C A1379 65.703 175.013 64.438 1.00 45.33 C
ATOM 10 O3' C A1379 65.833 175.933 65.525 1.00 44.82 O
ATOM 11 C2' C A1379 66.349 175.507 63.152 1.00 46.01 C
ATOM 12 O2' C A1379 67.596 176.113 63.387 1.00 45.76 O
ATOM 13 C1' C A1379 66.655 174.184 62.441 1.00 47.02 C
ATOM 14 N1 C A1379 65.608 173.622 61.555 1.00 48.07 N
ATOM 15 C2 C A1379 65.155 174.390 60.464 1.00 48.50 C
ATOM 16 O2 C A1379 65.606 175.534 60.302 1.00 51.19 O
ATOM 17 N3 C A1379 64.244 173.863 59.617 1.00 47.19 N
ATOM 18 C4 C A1379 63.778 172.632 59.823 1.00 46.73 C
ATOM 19 N4 C A1379 62.900 172.155 58.963 1.00 46.09 N
ATOM 20 C5 C A1379 64.200 171.837 60.929 1.00 47.80 C
ATOM 21 C6 C A1379 65.103 172.367 61.767 1.00 47.52 C
ATOM 22 P C A1380 64.523 176.600 66.175 1.00 46.43 P
ATOM 23 OP1 C A1380 64.906 177.350 67.411 1.00 45.88 O
ATOM 24 OP2 C A1380 63.493 175.533 66.272 1.00 46.18 O
ATOM 25 O5' C A1380 64.069 177.650 65.060 1.00 46.94 O
TER
ATOM 1 O3' U B1377 62.160 168.866 60.135 1.00 35.05 O
ATOM 2 P U B1378 60.864 168.747 61.051 1.00 39.01 P
ATOM 3 OP1 U B1378 60.088 167.585 60.498 1.00 42.62 O
ATOM 4 OP2 U B1378 60.213 170.058 61.163 1.00 39.73 O
ATOM 5 O5' U B1378 61.434 168.376 62.487 1.00 38.42 O
ATOM 6 C5' U B1378 62.153 169.361 63.241 1.00 41.53 C
ATOM 7 C4' U B1378 62.866 168.733 64.409 1.00 41.95 C
ATOM 8 O4' U B1378 63.573 167.561 63.956 1.00 40.16 O
ATOM 9 C3' U B1378 63.950 169.608 65.013 1.00 42.52 C
ATOM 10 O3' U B1378 63.370 170.525 65.944 1.00 44.24 O
ATOM 11 C2' U B1378 64.874 168.582 65.675 1.00 41.85 C
ATOM 12 O2' U B1378 64.426 168.163 66.941 1.00 45.84 O
ATOM 13 C1' U B1378 64.730 167.382 64.736 1.00 39.89 C
ATOM 14 N1 U B1378 65.829 167.056 63.826 1.00 36.73 N
ATOM 15 C2 U B1378 66.301 168.027 62.975 1.00 36.33 C
ATOM 16 O2 U B1378 65.902 169.174 62.981 1.00 38.81 O
ATOM 17 N3 U B1378 67.268 167.601 62.106 1.00 35.56 N
ATOM 18 C4 U B1378 67.801 166.331 62.011 1.00 35.78 C
ATOM 19 O4 U B1378 68.670 166.094 61.172 1.00 34.18 O
ATOM 20 C5 U B1378 67.278 165.397 62.951 1.00 35.69 C
ATOM 21 C6 U B1378 66.341 165.786 63.810 1.00 36.45 C
ATOM 22 P C B1379 63.097 172.046 65.507 1.00 44.96 P
ATOM 23 OP1 C B1379 63.063 172.832 66.765 1.00 44.23 O
ATOM 24 OP2 C B1379 61.946 172.127 64.586 1.00 44.17 O
ATOM 25 O5' C B1379 64.415 172.444 64.699 1.00 44.85 O
TER
ATOM 2 P C A1379 63.097 172.046 65.507 1.00 44.96 P
ATOM 3 OP1 C A1379 63.063 172.832 66.765 1.00 44.23 O
ATOM 4 OP2 C A1379 61.946 172.127 64.586 1.00 44.17 O
ATOM 5 O5' C A1379 64.415 172.444 64.699 1.00 44.85 O
ATOM 6 C5' C A1379 65.674 172.644 65.393 1.00 45.73 C
ATOM 7 C4' C A1379 66.478 173.734 64.726 1.00 45.82 C
ATOM 8 O4' C A1379 66.949 173.242 63.448 1.00 45.83 O
ATOM 9 C3' C A1379 65.703 175.013 64.438 1.00 45.33 C
ATOM 10 O3' C A1379 65.833 175.933 65.525 1.00 44.82 O
ATOM 11 C2' C A1379 66.349 175.507 63.152 1.00 46.01 C
ATOM 12 O2' C A1379 67.596 176.113 63.387 1.00 45.76 O
ATOM 13 C1' C A1379 66.655 174.184 62.441 1.00 47.02 C
ATOM 14 N1 C A1379 65.608 173.622 61.555 1.00 48.07 N
ATOM 15 C2 C A1379 65.155 174.390 60.464 1.00 48.50 C
ATOM 16 O2 C A1379 65.606 175.534 60.302 1.00 51.19 O
ATOM 17 N3 C A1379 64.244 173.863 59.617 1.00 47.19 N
ATOM 18 C4 C A1379 63.778 172.632 59.823 1.00 46.73 C
ATOM 19 N4 C A1379 62.900 172.155 58.963 1.00 46.09 N
ATOM 20 C5 C A1379 64.200 171.837 60.929 1.00 47.80 C
ATOM 21 C6 C A1379 65.103 172.367 61.767 1.00 47.52 C
ATOM 22 P C A1380 64.523 176.600 66.175 1.00 46.43 P
ATOM 23 OP1 C A1380 64.906 177.350 67.411 1.00 45.88 O
ATOM 24 OP2 C A1380 63.493 175.533 66.272 1.00 46.18 O
ATOM 25 O5' C A1380 64.069 177.650 65.060 1.00 46.94 O
TER
ATOM 1 O3' U B1377 62.160 168.866 60.135 1.00 35.05 O
ATOM 2 P U B1378 60.864 168.747 61.051 1.00 39.01 P
ATOM 3 OP1 U B1378 60.088 167.585 60.498 1.00 42.62 O
ATOM 4 OP2 U B1378 60.213 170.058 61.163 1.00 39.73 O
ATOM 5 O5' U B1378 61.434 168.376 62.487 1.00 38.42 O
ATOM 6 C5' U B1378 62.153 169.361 63.241 1.00 41.53 C
ATOM 7 C4' U B1378 62.866 168.733 64.409 1.00 41.95 C
ATOM 8 O4' U B1378 63.573 167.561 63.956 1.00 40.16 O
ATOM 9 C3' U B1378 63.950 169.608 65.013 1.00 42.52 C
ATOM 10 O3' U B1378 63.370 170.525 65.944 1.00 44.24 O
ATOM 11 C2' U B1378 64.874 168.582 65.675 1.00 41.85 C
ATOM 12 O2' U B1378 64.426 168.163 66.941 1.00 45.84 O
ATOM 13 C1' U B1378 64.730 167.382 64.736 1.00 39.89 C
ATOM 14 N1 U B1378 65.829 167.056 63.826 1.00 36.73 N
ATOM 15 C2 U B1378 66.301 168.027 62.975 1.00 36.33 C
ATOM 16 O2 U B1378 65.902 169.174 62.981 1.00 38.81 O
ATOM 17 N3 U B1378 67.268 167.601 62.106 1.00 35.56 N
ATOM 18 C4 U B1378 67.801 166.331 62.011 1.00 35.78 C
ATOM 19 O4 U B1378 68.670 166.094 61.172 1.00 34.18 O
ATOM 20 C5 U B1378 67.278 165.397 62.951 1.00 35.69 C
ATOM 21 C6 U B1378 66.341 165.786 63.810 1.00 36.45 C
ATOM 22 P C B1379 63.097 172.046 65.507 1.00 44.96 P
ATOM 23 OP1 C B1379 63.063 172.832 66.765 1.00 44.23 O
ATOM 24 OP2 C B1379 61.946 172.127 64.586 1.00 44.17 O
ATOM 25 O5' C B1379 64.415 172.444 64.699 1.00 44.85 O
TER
Atoms:
C2: (65.155,174.390,60.464)
OP1: (63.063,172.832,66.765)
OP2: (61.946,172.127,64.586)
C4: (63.778,172.632,59.823)
O5': (64.415,172.444,64.699)
C3': (65.703,175.013,64.438)
C1': (66.655,174.184,62.441)
O4': (66.949,173.242,63.448)
C5': (65.674,172.644,65.393)
P: (63.097,172.046,65.507)
O2: (65.606,175.534,60.302)
C4': (66.478,173.734,64.726)
C2': (66.349,175.507,63.152)
O2': (67.596,176.113,63.387)
N1: (65.608,173.622,61.555)
N3: (64.244,173.863,59.617)
N4: (62.900,172.155,58.963)
C6: (65.103,172.367,61.767)
C5: (64.200,171.837,60.929)
O3': (65.833,175.933,65.525)
OP1: (63.063,172.832,66.765)
OP2: (61.946,172.127,64.586)
C4: (63.778,172.632,59.823)
O5': (64.415,172.444,64.699)
C3': (65.703,175.013,64.438)
C1': (66.655,174.184,62.441)
O4': (66.949,173.242,63.448)
C5': (65.674,172.644,65.393)
P: (63.097,172.046,65.507)
O2: (65.606,175.534,60.302)
C4': (66.478,173.734,64.726)
C2': (66.349,175.507,63.152)
O2': (67.596,176.113,63.387)
N1: (65.608,173.622,61.555)
N3: (64.244,173.863,59.617)
N4: (62.900,172.155,58.963)
C6: (65.103,172.367,61.767)
C5: (64.200,171.837,60.929)
O3': (65.833,175.933,65.525)
C4: (67.801,166.331,62.011)
N3: (67.268,167.601,62.106)
OP1: (60.088,167.585,60.498)
OP2: (60.213,170.058,61.163)
C2: (66.301,168.027,62.975)
C1': (64.730,167.382,64.736)
C3': (63.950,169.608,65.013)
O5': (61.434,168.376,62.487)
O4': (63.573,167.561,63.956)
C5': (62.153,169.361,63.241)
P: (60.864,168.747,61.051)
C4': (62.866,168.733,64.409)
C2': (64.874,168.582,65.675)
O2': (64.426,168.163,66.941)
N1: (65.829,167.056,63.826)
O4: (68.670,166.094,61.172)
O2: (65.902,169.174,62.981)
C6: (66.341,165.786,63.810)
C5: (67.278,165.397,62.951)
O3': (63.370,170.525,65.944)
N3: (67.268,167.601,62.106)
OP1: (60.088,167.585,60.498)
OP2: (60.213,170.058,61.163)
C2: (66.301,168.027,62.975)
C1': (64.730,167.382,64.736)
C3': (63.950,169.608,65.013)
O5': (61.434,168.376,62.487)
O4': (63.573,167.561,63.956)
C5': (62.153,169.361,63.241)
P: (60.864,168.747,61.051)
C4': (62.866,168.733,64.409)
C2': (64.874,168.582,65.675)
O2': (64.426,168.163,66.941)
N1: (65.829,167.056,63.826)
O4: (68.670,166.094,61.172)
O2: (65.902,169.174,62.981)
C6: (66.341,165.786,63.810)
C5: (67.278,165.397,62.951)
O3': (63.370,170.525,65.944)
Image (generated by PyMOL):