Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2432:A2431
Extra
PDB:
ATOM 1 O3' U A2431 74.788 123.852 120.568 1.00 45.28 O
ATOM 2 P C A2432 75.289 123.968 122.088 1.00 45.45 P
ATOM 3 OP1 C A2432 74.102 123.844 122.964 1.00 43.53 O
ATOM 4 OP2 C A2432 76.159 125.175 122.180 1.00 43.33 O
ATOM 5 O5' C A2432 76.180 122.668 122.286 1.00 43.95 O
ATOM 6 C5' C A2432 75.578 121.356 122.225 1.00 44.56 C
ATOM 7 C4' C A2432 76.634 120.282 122.079 1.00 43.20 C
ATOM 8 O4' C A2432 77.409 120.498 120.879 1.00 42.05 O
ATOM 9 C3' C A2432 77.697 120.243 123.158 1.00 42.97 C
ATOM 10 O3' C A2432 77.259 119.584 124.317 1.00 42.20 O
ATOM 11 C2' C A2432 78.768 119.421 122.484 1.00 43.41 C
ATOM 12 O2' C A2432 78.392 118.054 122.449 1.00 45.79 O
ATOM 13 C1' C A2432 78.727 120.024 121.084 1.00 42.40 C
ATOM 14 N1 C A2432 79.652 121.163 120.994 1.00 41.65 N
ATOM 15 C2 C A2432 80.985 120.919 120.653 1.00 42.47 C
ATOM 16 O2 C A2432 81.362 119.746 120.496 1.00 43.31 O
ATOM 17 N3 C A2432 81.827 121.966 120.516 1.00 41.30 N
ATOM 18 C4 C A2432 81.385 123.210 120.726 1.00 40.19 C
ATOM 19 N4 C A2432 82.236 124.216 120.538 1.00 40.04 N
ATOM 20 C5 C A2432 80.050 123.478 121.122 1.00 39.55 C
ATOM 21 C6 C A2432 79.224 122.437 121.237 1.00 40.82 C
ATOM 22 P G A2433 77.679 120.152 125.746 1.00 44.04 P
ATOM 23 OP1 G A2433 77.205 119.150 126.728 1.00 43.90 O
ATOM 24 OP2 G A2433 77.192 121.550 125.830 1.00 43.30 O
ATOM 25 O5' G A2433 79.273 120.155 125.723 1.00 43.53 O
TER
ATOM 1 O3' U B2430 79.170 127.445 117.374 1.00 42.47 O
ATOM 2 P U B2431 78.522 127.117 118.819 1.00 44.32 P
ATOM 3 OP1 U B2431 77.575 128.187 119.246 1.00 43.57 O
ATOM 4 OP2 U B2431 79.634 126.759 119.698 1.00 43.31 O
ATOM 5 O5' U B2431 77.643 125.808 118.593 1.00 43.89 O
ATOM 6 C5' U B2431 76.214 125.908 118.473 1.00 44.98 C
ATOM 7 C4' U B2431 75.581 124.547 118.366 1.00 45.01 C
ATOM 8 O4' U B2431 76.197 123.825 117.277 1.00 45.31 O
ATOM 9 C3' U B2431 75.729 123.603 119.542 1.00 45.06 C
ATOM 10 O3' U B2431 74.788 123.852 120.568 1.00 45.28 O
ATOM 11 C2' U B2431 75.441 122.259 118.896 1.00 46.07 C
ATOM 12 O2' U B2431 74.052 122.075 118.701 1.00 44.28 O
ATOM 13 C1' U B2431 76.118 122.431 117.535 1.00 47.25 C
ATOM 14 N1 U B2431 77.469 121.855 117.454 1.00 49.92 N
ATOM 15 C2 U B2431 77.584 120.498 117.201 1.00 51.60 C
ATOM 16 O2 U B2431 76.619 119.747 117.097 1.00 53.58 O
ATOM 17 N3 U B2431 78.874 120.047 117.086 1.00 53.50 N
ATOM 18 C4 U B2431 80.031 120.787 117.217 1.00 52.99 C
ATOM 19 O4 U B2431 81.128 120.222 117.131 1.00 53.47 O
ATOM 20 C5 U B2431 79.824 122.166 117.502 1.00 51.86 C
ATOM 21 C6 U B2431 78.585 122.640 117.608 1.00 50.62 C
ATOM 22 P C B2432 75.289 123.968 122.088 1.00 45.45 P
ATOM 23 OP1 C B2432 74.102 123.844 122.964 1.00 43.53 O
ATOM 24 OP2 C B2432 76.159 125.175 122.180 1.00 43.33 O
ATOM 25 O5' C B2432 76.180 122.668 122.286 1.00 43.95 O
TER
ATOM 2 P C A2432 75.289 123.968 122.088 1.00 45.45 P
ATOM 3 OP1 C A2432 74.102 123.844 122.964 1.00 43.53 O
ATOM 4 OP2 C A2432 76.159 125.175 122.180 1.00 43.33 O
ATOM 5 O5' C A2432 76.180 122.668 122.286 1.00 43.95 O
ATOM 6 C5' C A2432 75.578 121.356 122.225 1.00 44.56 C
ATOM 7 C4' C A2432 76.634 120.282 122.079 1.00 43.20 C
ATOM 8 O4' C A2432 77.409 120.498 120.879 1.00 42.05 O
ATOM 9 C3' C A2432 77.697 120.243 123.158 1.00 42.97 C
ATOM 10 O3' C A2432 77.259 119.584 124.317 1.00 42.20 O
ATOM 11 C2' C A2432 78.768 119.421 122.484 1.00 43.41 C
ATOM 12 O2' C A2432 78.392 118.054 122.449 1.00 45.79 O
ATOM 13 C1' C A2432 78.727 120.024 121.084 1.00 42.40 C
ATOM 14 N1 C A2432 79.652 121.163 120.994 1.00 41.65 N
ATOM 15 C2 C A2432 80.985 120.919 120.653 1.00 42.47 C
ATOM 16 O2 C A2432 81.362 119.746 120.496 1.00 43.31 O
ATOM 17 N3 C A2432 81.827 121.966 120.516 1.00 41.30 N
ATOM 18 C4 C A2432 81.385 123.210 120.726 1.00 40.19 C
ATOM 19 N4 C A2432 82.236 124.216 120.538 1.00 40.04 N
ATOM 20 C5 C A2432 80.050 123.478 121.122 1.00 39.55 C
ATOM 21 C6 C A2432 79.224 122.437 121.237 1.00 40.82 C
ATOM 22 P G A2433 77.679 120.152 125.746 1.00 44.04 P
ATOM 23 OP1 G A2433 77.205 119.150 126.728 1.00 43.90 O
ATOM 24 OP2 G A2433 77.192 121.550 125.830 1.00 43.30 O
ATOM 25 O5' G A2433 79.273 120.155 125.723 1.00 43.53 O
TER
ATOM 1 O3' U B2430 79.170 127.445 117.374 1.00 42.47 O
ATOM 2 P U B2431 78.522 127.117 118.819 1.00 44.32 P
ATOM 3 OP1 U B2431 77.575 128.187 119.246 1.00 43.57 O
ATOM 4 OP2 U B2431 79.634 126.759 119.698 1.00 43.31 O
ATOM 5 O5' U B2431 77.643 125.808 118.593 1.00 43.89 O
ATOM 6 C5' U B2431 76.214 125.908 118.473 1.00 44.98 C
ATOM 7 C4' U B2431 75.581 124.547 118.366 1.00 45.01 C
ATOM 8 O4' U B2431 76.197 123.825 117.277 1.00 45.31 O
ATOM 9 C3' U B2431 75.729 123.603 119.542 1.00 45.06 C
ATOM 10 O3' U B2431 74.788 123.852 120.568 1.00 45.28 O
ATOM 11 C2' U B2431 75.441 122.259 118.896 1.00 46.07 C
ATOM 12 O2' U B2431 74.052 122.075 118.701 1.00 44.28 O
ATOM 13 C1' U B2431 76.118 122.431 117.535 1.00 47.25 C
ATOM 14 N1 U B2431 77.469 121.855 117.454 1.00 49.92 N
ATOM 15 C2 U B2431 77.584 120.498 117.201 1.00 51.60 C
ATOM 16 O2 U B2431 76.619 119.747 117.097 1.00 53.58 O
ATOM 17 N3 U B2431 78.874 120.047 117.086 1.00 53.50 N
ATOM 18 C4 U B2431 80.031 120.787 117.217 1.00 52.99 C
ATOM 19 O4 U B2431 81.128 120.222 117.131 1.00 53.47 O
ATOM 20 C5 U B2431 79.824 122.166 117.502 1.00 51.86 C
ATOM 21 C6 U B2431 78.585 122.640 117.608 1.00 50.62 C
ATOM 22 P C B2432 75.289 123.968 122.088 1.00 45.45 P
ATOM 23 OP1 C B2432 74.102 123.844 122.964 1.00 43.53 O
ATOM 24 OP2 C B2432 76.159 125.175 122.180 1.00 43.33 O
ATOM 25 O5' C B2432 76.180 122.668 122.286 1.00 43.95 O
TER
Atoms:
C2: (80.985,120.919,120.653)
OP1: (74.102,123.844,122.964)
OP2: (76.159,125.175,122.180)
C4: (81.385,123.210,120.726)
O5': (76.180,122.668,122.286)
C3': (77.697,120.243,123.158)
C1': (78.727,120.024,121.084)
O4': (77.409,120.498,120.879)
C5': (75.578,121.356,122.225)
P: (75.289,123.968,122.088)
O2: (81.362,119.746,120.496)
C4': (76.634,120.282,122.079)
C2': (78.768,119.421,122.484)
O2': (78.392,118.054,122.449)
N1: (79.652,121.163,120.994)
N3: (81.827,121.966,120.516)
N4: (82.236,124.216,120.538)
C6: (79.224,122.437,121.237)
C5: (80.050,123.478,121.122)
O3': (77.259,119.584,124.317)
OP1: (74.102,123.844,122.964)
OP2: (76.159,125.175,122.180)
C4: (81.385,123.210,120.726)
O5': (76.180,122.668,122.286)
C3': (77.697,120.243,123.158)
C1': (78.727,120.024,121.084)
O4': (77.409,120.498,120.879)
C5': (75.578,121.356,122.225)
P: (75.289,123.968,122.088)
O2: (81.362,119.746,120.496)
C4': (76.634,120.282,122.079)
C2': (78.768,119.421,122.484)
O2': (78.392,118.054,122.449)
N1: (79.652,121.163,120.994)
N3: (81.827,121.966,120.516)
N4: (82.236,124.216,120.538)
C6: (79.224,122.437,121.237)
C5: (80.050,123.478,121.122)
O3': (77.259,119.584,124.317)
C4: (80.031,120.787,117.217)
N3: (78.874,120.047,117.086)
OP1: (77.575,128.187,119.246)
OP2: (79.634,126.759,119.698)
C2: (77.584,120.498,117.201)
C1': (76.118,122.431,117.535)
C3': (75.729,123.603,119.542)
O5': (77.643,125.808,118.593)
O4': (76.197,123.825,117.277)
C5': (76.214,125.908,118.473)
P: (78.522,127.117,118.819)
C4': (75.581,124.547,118.366)
C2': (75.441,122.259,118.896)
O2': (74.052,122.075,118.701)
N1: (77.469,121.855,117.454)
O4: (81.128,120.222,117.131)
O2: (76.619,119.747,117.097)
C6: (78.585,122.640,117.608)
C5: (79.824,122.166,117.502)
O3': (74.788,123.852,120.568)
N3: (78.874,120.047,117.086)
OP1: (77.575,128.187,119.246)
OP2: (79.634,126.759,119.698)
C2: (77.584,120.498,117.201)
C1': (76.118,122.431,117.535)
C3': (75.729,123.603,119.542)
O5': (77.643,125.808,118.593)
O4': (76.197,123.825,117.277)
C5': (76.214,125.908,118.473)
P: (78.522,127.117,118.819)
C4': (75.581,124.547,118.366)
C2': (75.441,122.259,118.896)
O2': (74.052,122.075,118.701)
N1: (77.469,121.855,117.454)
O4: (81.128,120.222,117.131)
O2: (76.619,119.747,117.097)
C6: (78.585,122.640,117.608)
C5: (79.824,122.166,117.502)
O3': (74.788,123.852,120.568)
Image (generated by PyMOL):