Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KUQ:B10:B9
Extra
PDB:
ATOM 1 O3' U A 9 -23.086 30.745 5.708 1.00 50.58 O
ATOM 2 P C A 10 -23.623 29.220 5.587 1.00 45.89 P
ATOM 3 OP1 C A 10 -24.351 29.067 4.308 1.00 60.52 O
ATOM 4 OP2 C A 10 -24.280 28.813 6.844 1.00 58.86 O
ATOM 5 O5' C A 10 -22.300 28.351 5.449 1.00 46.78 O
ATOM 6 C5' C A 10 -21.161 28.865 4.772 1.00 48.24 C
ATOM 7 C4' C A 10 -20.099 29.271 5.770 1.00 50.04 C
ATOM 8 O4' C A 10 -20.535 30.389 6.563 1.00 50.76 O
ATOM 9 C3' C A 10 -19.651 28.216 6.774 1.00 50.86 C
ATOM 10 O3' C A 10 -18.610 27.555 6.054 1.00 53.43 O
ATOM 11 C2' C A 10 -19.169 29.024 7.988 1.00 50.78 C
ATOM 12 O2' C A 10 -17.783 29.223 7.981 1.00 53.22 O
ATOM 13 C1' C A 10 -19.779 30.406 7.744 1.00 51.12 C
ATOM 14 N1 C A 10 -20.517 31.119 8.786 1.00 64.19 N
ATOM 15 C2 C A 10 -20.025 31.141 10.088 1.00 64.85 C
ATOM 16 O2 C A 10 -19.022 30.477 10.365 1.00 65.55 O
ATOM 17 N3 C A 10 -20.660 31.884 11.015 1.00 64.98 N
ATOM 18 C4 C A 10 -21.758 32.565 10.683 1.00 65.29 C
ATOM 19 N4 C A 10 -22.356 33.292 11.621 1.00 66.03 N
ATOM 20 C5 C A 10 -22.295 32.531 9.373 1.00 65.14 C
ATOM 21 C6 C A 10 -21.655 31.798 8.466 1.00 64.77 C
ATOM 22 P G A 11 -17.431 26.744 6.803 1.00 59.24 P
ATOM 23 OP1 G A 11 -17.732 25.311 6.547 1.00 67.07 O
ATOM 24 OP2 G A 11 -17.159 27.187 8.199 1.00 64.39 O
ATOM 25 O5' G A 11 -16.166 27.119 5.907 1.00 56.13 O
TER
ATOM 1 O3' U B 8 -24.883 35.223 7.485 1.00 53.88 O
ATOM 2 P U B 9 -25.735 34.197 8.385 1.00 49.64 P
ATOM 3 OP1 U B 9 -26.888 34.979 8.902 1.00 52.63 O
ATOM 4 OP2 U B 9 -24.827 33.522 9.338 1.00 54.30 O
ATOM 5 O5' U B 9 -26.305 33.130 7.342 1.00 51.02 O
ATOM 6 C5' U B 9 -25.868 31.763 7.322 1.00 50.07 C
ATOM 7 C4' U B 9 -25.418 31.391 5.923 1.00 50.35 C
ATOM 8 O4' U B 9 -26.282 32.087 5.004 1.00 50.53 O
ATOM 9 C3' U B 9 -24.002 31.844 5.591 1.00 50.69 C
ATOM 10 O3' U B 9 -23.086 30.745 5.708 1.00 50.58 O
ATOM 11 C2' U B 9 -24.058 32.274 4.120 1.00 51.18 C
ATOM 12 O2' U B 9 -23.503 31.341 3.214 1.00 52.09 O
ATOM 13 C1' U B 9 -25.558 32.448 3.861 1.00 50.99 C
ATOM 14 N1 U B 9 -26.002 33.773 3.426 1.00 53.35 N
ATOM 15 C2 U B 9 -25.971 34.022 2.078 1.00 53.20 C
ATOM 16 O2 U B 9 -25.597 33.196 1.265 1.00 53.13 O
ATOM 17 N3 U B 9 -26.391 35.272 1.711 1.00 52.36 N
ATOM 18 C4 U B 9 -26.822 36.273 2.541 1.00 53.24 C
ATOM 19 O4 U B 9 -27.095 37.369 2.062 1.00 54.57 O
ATOM 20 C5 U B 9 -26.836 35.934 3.930 1.00 53.83 C
ATOM 21 C6 U B 9 -26.433 34.719 4.315 1.00 53.69 C
ATOM 22 P C B 10 -23.623 29.220 5.587 1.00 45.89 P
ATOM 23 OP1 C B 10 -24.351 29.067 4.308 1.00 60.52 O
ATOM 24 OP2 C B 10 -24.280 28.813 6.844 1.00 58.86 O
ATOM 25 O5' C B 10 -22.300 28.351 5.449 1.00 46.78 O
TER
ATOM 2 P C A 10 -23.623 29.220 5.587 1.00 45.89 P
ATOM 3 OP1 C A 10 -24.351 29.067 4.308 1.00 60.52 O
ATOM 4 OP2 C A 10 -24.280 28.813 6.844 1.00 58.86 O
ATOM 5 O5' C A 10 -22.300 28.351 5.449 1.00 46.78 O
ATOM 6 C5' C A 10 -21.161 28.865 4.772 1.00 48.24 C
ATOM 7 C4' C A 10 -20.099 29.271 5.770 1.00 50.04 C
ATOM 8 O4' C A 10 -20.535 30.389 6.563 1.00 50.76 O
ATOM 9 C3' C A 10 -19.651 28.216 6.774 1.00 50.86 C
ATOM 10 O3' C A 10 -18.610 27.555 6.054 1.00 53.43 O
ATOM 11 C2' C A 10 -19.169 29.024 7.988 1.00 50.78 C
ATOM 12 O2' C A 10 -17.783 29.223 7.981 1.00 53.22 O
ATOM 13 C1' C A 10 -19.779 30.406 7.744 1.00 51.12 C
ATOM 14 N1 C A 10 -20.517 31.119 8.786 1.00 64.19 N
ATOM 15 C2 C A 10 -20.025 31.141 10.088 1.00 64.85 C
ATOM 16 O2 C A 10 -19.022 30.477 10.365 1.00 65.55 O
ATOM 17 N3 C A 10 -20.660 31.884 11.015 1.00 64.98 N
ATOM 18 C4 C A 10 -21.758 32.565 10.683 1.00 65.29 C
ATOM 19 N4 C A 10 -22.356 33.292 11.621 1.00 66.03 N
ATOM 20 C5 C A 10 -22.295 32.531 9.373 1.00 65.14 C
ATOM 21 C6 C A 10 -21.655 31.798 8.466 1.00 64.77 C
ATOM 22 P G A 11 -17.431 26.744 6.803 1.00 59.24 P
ATOM 23 OP1 G A 11 -17.732 25.311 6.547 1.00 67.07 O
ATOM 24 OP2 G A 11 -17.159 27.187 8.199 1.00 64.39 O
ATOM 25 O5' G A 11 -16.166 27.119 5.907 1.00 56.13 O
TER
ATOM 1 O3' U B 8 -24.883 35.223 7.485 1.00 53.88 O
ATOM 2 P U B 9 -25.735 34.197 8.385 1.00 49.64 P
ATOM 3 OP1 U B 9 -26.888 34.979 8.902 1.00 52.63 O
ATOM 4 OP2 U B 9 -24.827 33.522 9.338 1.00 54.30 O
ATOM 5 O5' U B 9 -26.305 33.130 7.342 1.00 51.02 O
ATOM 6 C5' U B 9 -25.868 31.763 7.322 1.00 50.07 C
ATOM 7 C4' U B 9 -25.418 31.391 5.923 1.00 50.35 C
ATOM 8 O4' U B 9 -26.282 32.087 5.004 1.00 50.53 O
ATOM 9 C3' U B 9 -24.002 31.844 5.591 1.00 50.69 C
ATOM 10 O3' U B 9 -23.086 30.745 5.708 1.00 50.58 O
ATOM 11 C2' U B 9 -24.058 32.274 4.120 1.00 51.18 C
ATOM 12 O2' U B 9 -23.503 31.341 3.214 1.00 52.09 O
ATOM 13 C1' U B 9 -25.558 32.448 3.861 1.00 50.99 C
ATOM 14 N1 U B 9 -26.002 33.773 3.426 1.00 53.35 N
ATOM 15 C2 U B 9 -25.971 34.022 2.078 1.00 53.20 C
ATOM 16 O2 U B 9 -25.597 33.196 1.265 1.00 53.13 O
ATOM 17 N3 U B 9 -26.391 35.272 1.711 1.00 52.36 N
ATOM 18 C4 U B 9 -26.822 36.273 2.541 1.00 53.24 C
ATOM 19 O4 U B 9 -27.095 37.369 2.062 1.00 54.57 O
ATOM 20 C5 U B 9 -26.836 35.934 3.930 1.00 53.83 C
ATOM 21 C6 U B 9 -26.433 34.719 4.315 1.00 53.69 C
ATOM 22 P C B 10 -23.623 29.220 5.587 1.00 45.89 P
ATOM 23 OP1 C B 10 -24.351 29.067 4.308 1.00 60.52 O
ATOM 24 OP2 C B 10 -24.280 28.813 6.844 1.00 58.86 O
ATOM 25 O5' C B 10 -22.300 28.351 5.449 1.00 46.78 O
TER
Atoms:
C2: (-20.025,31.141,10.088)
OP1: (-24.351,29.067,4.308)
OP2: (-24.280,28.813,6.844)
C4: (-21.758,32.565,10.683)
O5': (-22.300,28.351,5.449)
C3': (-19.651,28.216,6.774)
C1': (-19.779,30.406,7.744)
O4': (-20.535,30.389,6.563)
C5': (-21.161,28.865,4.772)
P: (-23.623,29.220,5.587)
O2: (-19.022,30.477,10.365)
C4': (-20.099,29.271,5.770)
C2': (-19.169,29.024,7.988)
O2': (-17.783,29.223,7.981)
N1: (-20.517,31.119,8.786)
N3: (-20.660,31.884,11.015)
N4: (-22.356,33.292,11.621)
C6: (-21.655,31.798,8.466)
C5: (-22.295,32.531,9.373)
O3': (-18.610,27.555,6.054)
OP1: (-24.351,29.067,4.308)
OP2: (-24.280,28.813,6.844)
C4: (-21.758,32.565,10.683)
O5': (-22.300,28.351,5.449)
C3': (-19.651,28.216,6.774)
C1': (-19.779,30.406,7.744)
O4': (-20.535,30.389,6.563)
C5': (-21.161,28.865,4.772)
P: (-23.623,29.220,5.587)
O2: (-19.022,30.477,10.365)
C4': (-20.099,29.271,5.770)
C2': (-19.169,29.024,7.988)
O2': (-17.783,29.223,7.981)
N1: (-20.517,31.119,8.786)
N3: (-20.660,31.884,11.015)
N4: (-22.356,33.292,11.621)
C6: (-21.655,31.798,8.466)
C5: (-22.295,32.531,9.373)
O3': (-18.610,27.555,6.054)
C4: (-26.822,36.273,2.541)
N3: (-26.391,35.272,1.711)
OP1: (-26.888,34.979,8.902)
OP2: (-24.827,33.522,9.338)
C2: (-25.971,34.022,2.078)
C1': (-25.558,32.448,3.861)
C3': (-24.002,31.844,5.591)
O5': (-26.305,33.130,7.342)
O4': (-26.282,32.087,5.004)
C5': (-25.868,31.763,7.322)
P: (-25.735,34.197,8.385)
C4': (-25.418,31.391,5.923)
C2': (-24.058,32.274,4.120)
O2': (-23.503,31.341,3.214)
N1: (-26.002,33.773,3.426)
O4: (-27.095,37.369,2.062)
O2: (-25.597,33.196,1.265)
C6: (-26.433,34.719,4.315)
C5: (-26.836,35.934,3.930)
O3': (-23.086,30.745,5.708)
N3: (-26.391,35.272,1.711)
OP1: (-26.888,34.979,8.902)
OP2: (-24.827,33.522,9.338)
C2: (-25.971,34.022,2.078)
C1': (-25.558,32.448,3.861)
C3': (-24.002,31.844,5.591)
O5': (-26.305,33.130,7.342)
O4': (-26.282,32.087,5.004)
C5': (-25.868,31.763,7.322)
P: (-25.735,34.197,8.385)
C4': (-25.418,31.391,5.923)
C2': (-24.058,32.274,4.120)
O2': (-23.503,31.341,3.214)
N1: (-26.002,33.773,3.426)
O4: (-27.095,37.369,2.062)
O2: (-25.597,33.196,1.265)
C6: (-26.433,34.719,4.315)
C5: (-26.836,35.934,3.930)
O3': (-23.086,30.745,5.708)
Image (generated by PyMOL):