Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1L3D:A13:A12
Extra
PDB:
ATOM 1 O3' U A 12 24.101 51.877 18.425 0.50 51.97 O
ATOM 2 P C A 13 23.726 51.173 17.033 0.50 51.95 P
ATOM 3 OP1 C A 13 23.030 52.180 16.190 0.50 51.40 O
ATOM 4 OP2 C A 13 23.057 49.872 17.328 0.50 51.66 O
ATOM 5 O5' C A 13 25.144 50.866 16.377 0.50 48.65 O
ATOM 6 C5' C A 13 26.142 50.131 17.102 0.50 45.51 C
ATOM 7 C4' C A 13 26.716 49.057 16.223 0.50 43.62 C
ATOM 8 O4' C A 13 27.223 49.661 15.010 0.50 42.44 O
ATOM 9 C3' C A 13 27.891 48.274 16.781 0.50 42.63 C
ATOM 10 O3' C A 13 27.431 47.200 17.578 0.50 42.04 O
ATOM 11 C2' C A 13 28.562 47.764 15.514 0.50 42.09 C
ATOM 12 O2' C A 13 27.855 46.658 14.996 0.50 43.53 O
ATOM 13 C1' C A 13 28.348 48.934 14.556 0.50 39.98 C
ATOM 14 N1 C A 13 29.486 49.857 14.483 0.50 36.25 N
ATOM 15 C2 C A 13 30.677 49.410 13.912 0.50 35.35 C
ATOM 16 O2 C A 13 30.744 48.241 13.518 0.50 35.27 O
ATOM 17 N3 C A 13 31.719 50.263 13.803 0.50 33.89 N
ATOM 18 C4 C A 13 31.599 51.515 14.245 0.50 33.19 C
ATOM 19 N4 C A 13 32.638 52.329 14.109 0.50 32.31 N
ATOM 20 C5 C A 13 30.397 51.989 14.846 0.50 33.61 C
ATOM 21 C6 C A 13 29.379 51.135 14.948 0.50 34.37 C
ATOM 22 P C A 14 28.317 46.685 18.813 1.00 42.95 P
ATOM 23 OP1 C A 14 27.562 45.568 19.423 1.00 43.64 O
ATOM 24 OP2 C A 14 28.708 47.845 19.636 1.00 43.09 O
ATOM 25 O5' C A 14 29.619 46.097 18.137 1.00 39.23 O
TER
ATOM 1 O3' G B 11 26.734 55.462 15.821 0.50 43.69 O
ATOM 2 P U B 12 27.845 55.588 16.975 0.50 45.78 P
ATOM 3 OP1 U B 12 28.115 57.031 17.223 0.50 44.26 O
ATOM 4 OP2 U B 12 28.959 54.686 16.610 0.50 45.13 O
ATOM 5 O5' U B 12 27.129 54.956 18.248 0.50 47.29 O
ATOM 6 C5' U B 12 27.347 53.586 18.592 0.50 50.11 C
ATOM 7 C4' U B 12 26.101 52.982 19.198 0.50 52.83 C
ATOM 8 O4' U B 12 25.858 53.539 20.517 0.50 54.49 O
ATOM 9 C3' U B 12 24.799 53.113 18.415 0.50 53.27 C
ATOM 10 O3' U B 12 24.101 51.877 18.425 0.50 51.97 O
ATOM 11 C2' U B 12 24.007 54.150 19.209 0.50 54.82 C
ATOM 12 O2' U B 12 22.610 53.927 19.151 0.50 55.35 O
ATOM 13 C1' U B 12 24.503 53.909 20.632 0.50 55.35 C
ATOM 14 N1 U B 12 24.405 55.094 21.497 0.50 56.60 N
ATOM 15 C2 U B 12 23.700 54.963 22.682 0.50 56.90 C
ATOM 16 O2 U B 12 23.182 53.916 23.033 0.50 56.53 O
ATOM 17 N3 U B 12 23.624 56.104 23.438 0.50 57.13 N
ATOM 18 C4 U B 12 24.168 57.332 23.144 0.50 57.53 C
ATOM 19 O4 U B 12 24.008 58.263 23.934 0.50 58.29 O
ATOM 20 C5 U B 12 24.889 57.388 21.906 0.50 57.27 C
ATOM 21 C6 U B 12 24.981 56.293 21.146 0.50 57.02 C
ATOM 22 P C B 13 23.726 51.173 17.033 0.50 51.95 P
ATOM 23 OP1 C B 13 23.030 52.180 16.190 0.50 51.40 O
ATOM 24 OP2 C B 13 23.057 49.872 17.328 0.50 51.66 O
ATOM 25 O5' C B 13 25.144 50.866 16.377 0.50 48.65 O
TER
ATOM 2 P C A 13 23.726 51.173 17.033 0.50 51.95 P
ATOM 3 OP1 C A 13 23.030 52.180 16.190 0.50 51.40 O
ATOM 4 OP2 C A 13 23.057 49.872 17.328 0.50 51.66 O
ATOM 5 O5' C A 13 25.144 50.866 16.377 0.50 48.65 O
ATOM 6 C5' C A 13 26.142 50.131 17.102 0.50 45.51 C
ATOM 7 C4' C A 13 26.716 49.057 16.223 0.50 43.62 C
ATOM 8 O4' C A 13 27.223 49.661 15.010 0.50 42.44 O
ATOM 9 C3' C A 13 27.891 48.274 16.781 0.50 42.63 C
ATOM 10 O3' C A 13 27.431 47.200 17.578 0.50 42.04 O
ATOM 11 C2' C A 13 28.562 47.764 15.514 0.50 42.09 C
ATOM 12 O2' C A 13 27.855 46.658 14.996 0.50 43.53 O
ATOM 13 C1' C A 13 28.348 48.934 14.556 0.50 39.98 C
ATOM 14 N1 C A 13 29.486 49.857 14.483 0.50 36.25 N
ATOM 15 C2 C A 13 30.677 49.410 13.912 0.50 35.35 C
ATOM 16 O2 C A 13 30.744 48.241 13.518 0.50 35.27 O
ATOM 17 N3 C A 13 31.719 50.263 13.803 0.50 33.89 N
ATOM 18 C4 C A 13 31.599 51.515 14.245 0.50 33.19 C
ATOM 19 N4 C A 13 32.638 52.329 14.109 0.50 32.31 N
ATOM 20 C5 C A 13 30.397 51.989 14.846 0.50 33.61 C
ATOM 21 C6 C A 13 29.379 51.135 14.948 0.50 34.37 C
ATOM 22 P C A 14 28.317 46.685 18.813 1.00 42.95 P
ATOM 23 OP1 C A 14 27.562 45.568 19.423 1.00 43.64 O
ATOM 24 OP2 C A 14 28.708 47.845 19.636 1.00 43.09 O
ATOM 25 O5' C A 14 29.619 46.097 18.137 1.00 39.23 O
TER
ATOM 1 O3' G B 11 26.734 55.462 15.821 0.50 43.69 O
ATOM 2 P U B 12 27.845 55.588 16.975 0.50 45.78 P
ATOM 3 OP1 U B 12 28.115 57.031 17.223 0.50 44.26 O
ATOM 4 OP2 U B 12 28.959 54.686 16.610 0.50 45.13 O
ATOM 5 O5' U B 12 27.129 54.956 18.248 0.50 47.29 O
ATOM 6 C5' U B 12 27.347 53.586 18.592 0.50 50.11 C
ATOM 7 C4' U B 12 26.101 52.982 19.198 0.50 52.83 C
ATOM 8 O4' U B 12 25.858 53.539 20.517 0.50 54.49 O
ATOM 9 C3' U B 12 24.799 53.113 18.415 0.50 53.27 C
ATOM 10 O3' U B 12 24.101 51.877 18.425 0.50 51.97 O
ATOM 11 C2' U B 12 24.007 54.150 19.209 0.50 54.82 C
ATOM 12 O2' U B 12 22.610 53.927 19.151 0.50 55.35 O
ATOM 13 C1' U B 12 24.503 53.909 20.632 0.50 55.35 C
ATOM 14 N1 U B 12 24.405 55.094 21.497 0.50 56.60 N
ATOM 15 C2 U B 12 23.700 54.963 22.682 0.50 56.90 C
ATOM 16 O2 U B 12 23.182 53.916 23.033 0.50 56.53 O
ATOM 17 N3 U B 12 23.624 56.104 23.438 0.50 57.13 N
ATOM 18 C4 U B 12 24.168 57.332 23.144 0.50 57.53 C
ATOM 19 O4 U B 12 24.008 58.263 23.934 0.50 58.29 O
ATOM 20 C5 U B 12 24.889 57.388 21.906 0.50 57.27 C
ATOM 21 C6 U B 12 24.981 56.293 21.146 0.50 57.02 C
ATOM 22 P C B 13 23.726 51.173 17.033 0.50 51.95 P
ATOM 23 OP1 C B 13 23.030 52.180 16.190 0.50 51.40 O
ATOM 24 OP2 C B 13 23.057 49.872 17.328 0.50 51.66 O
ATOM 25 O5' C B 13 25.144 50.866 16.377 0.50 48.65 O
TER
Atoms:
C2: (30.677,49.410,13.912)
OP1: (23.030,52.180,16.190)
OP2: (23.057,49.872,17.328)
C4: (31.599,51.515,14.245)
O5': (25.144,50.866,16.377)
C3': (27.891,48.274,16.781)
C1': (28.348,48.934,14.556)
O4': (27.223,49.661,15.010)
C5': (26.142,50.131,17.102)
P: (23.726,51.173,17.033)
O2: (30.744,48.241,13.518)
C4': (26.716,49.057,16.223)
C2': (28.562,47.764,15.514)
O2': (27.855,46.658,14.996)
N1: (29.486,49.857,14.483)
N3: (31.719,50.263,13.803)
N4: (32.638,52.329,14.109)
C6: (29.379,51.135,14.948)
C5: (30.397,51.989,14.846)
O3': (27.431,47.200,17.578)
OP1: (23.030,52.180,16.190)
OP2: (23.057,49.872,17.328)
C4: (31.599,51.515,14.245)
O5': (25.144,50.866,16.377)
C3': (27.891,48.274,16.781)
C1': (28.348,48.934,14.556)
O4': (27.223,49.661,15.010)
C5': (26.142,50.131,17.102)
P: (23.726,51.173,17.033)
O2: (30.744,48.241,13.518)
C4': (26.716,49.057,16.223)
C2': (28.562,47.764,15.514)
O2': (27.855,46.658,14.996)
N1: (29.486,49.857,14.483)
N3: (31.719,50.263,13.803)
N4: (32.638,52.329,14.109)
C6: (29.379,51.135,14.948)
C5: (30.397,51.989,14.846)
O3': (27.431,47.200,17.578)
C4: (24.168,57.332,23.144)
N3: (23.624,56.104,23.438)
OP1: (28.115,57.031,17.223)
OP2: (28.959,54.686,16.610)
C2: (23.700,54.963,22.682)
C1': (24.503,53.909,20.632)
C3': (24.799,53.113,18.415)
O5': (27.129,54.956,18.248)
O4': (25.858,53.539,20.517)
C5': (27.347,53.586,18.592)
P: (27.845,55.588,16.975)
C4': (26.101,52.982,19.198)
C2': (24.007,54.150,19.209)
O2': (22.610,53.927,19.151)
N1: (24.405,55.094,21.497)
O4: (24.008,58.263,23.934)
O2: (23.182,53.916,23.033)
C6: (24.981,56.293,21.146)
C5: (24.889,57.388,21.906)
O3': (24.101,51.877,18.425)
N3: (23.624,56.104,23.438)
OP1: (28.115,57.031,17.223)
OP2: (28.959,54.686,16.610)
C2: (23.700,54.963,22.682)
C1': (24.503,53.909,20.632)
C3': (24.799,53.113,18.415)
O5': (27.129,54.956,18.248)
O4': (25.858,53.539,20.517)
C5': (27.347,53.586,18.592)
P: (27.845,55.588,16.975)
C4': (26.101,52.982,19.198)
C2': (24.007,54.150,19.209)
O2': (22.610,53.927,19.151)
N1: (24.405,55.094,21.497)
O4: (24.008,58.263,23.934)
O2: (23.182,53.916,23.033)
C6: (24.981,56.293,21.146)
C5: (24.889,57.388,21.906)
O3': (24.101,51.877,18.425)
Image (generated by PyMOL):