Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0159:0158
Extra
PDB:
ATOM 1 O3' U A 158 79.486 100.659 54.204 1.00 28.63 O
ATOM 2 P C A 159 78.354 101.513 53.457 1.00 28.57 P
ATOM 3 OP1 C A 159 78.644 101.469 52.008 1.00 29.28 O
ATOM 4 OP2 C A 159 78.245 102.812 54.147 1.00 30.89 O
ATOM 5 O5' C A 159 76.993 100.738 53.735 1.00 27.85 O
ATOM 6 C5' C A 159 76.658 99.531 53.041 1.00 27.88 C
ATOM 7 C4' C A 159 75.336 99.006 53.542 1.00 29.61 C
ATOM 8 O4' C A 159 75.443 98.687 54.961 1.00 32.44 O
ATOM 9 C3' C A 159 74.186 99.994 53.483 1.00 28.39 C
ATOM 10 O3' C A 159 73.608 100.037 52.191 1.00 28.05 O
ATOM 11 C2' C A 159 73.237 99.424 54.522 1.00 28.98 C
ATOM 12 O2' C A 159 72.596 98.263 54.046 1.00 32.83 O
ATOM 13 C1' C A 159 74.217 98.986 55.611 1.00 30.57 C
ATOM 14 N1 C A 159 74.442 100.041 56.621 1.00 29.05 N
ATOM 15 C2 C A 159 73.480 100.229 57.628 1.00 29.30 C
ATOM 16 O2 C A 159 72.517 99.457 57.695 1.00 30.12 O
ATOM 17 N3 C A 159 73.630 101.242 58.508 1.00 29.81 N
ATOM 18 C4 C A 159 74.697 102.036 58.434 1.00 28.79 C
ATOM 19 N4 C A 159 74.784 103.036 59.310 1.00 27.71 N
ATOM 20 C5 C A 159 75.716 101.843 57.453 1.00 28.13 C
ATOM 21 C6 C A 159 75.549 100.845 56.574 1.00 29.20 C
ATOM 22 P U A 160 72.926 101.393 51.669 1.00 30.80 P
ATOM 23 OP1 U A 160 72.181 101.061 50.428 1.00 32.13 O
ATOM 24 OP2 U A 160 73.958 102.460 51.640 1.00 32.62 O
ATOM 25 O5' U A 160 71.866 101.763 52.794 1.00 29.08 O
TER
ATOM 1 O3' A B 157 80.552 102.316 59.968 1.00 29.17 O
ATOM 2 P U B 158 80.057 103.125 58.676 1.00 30.08 P
ATOM 3 OP1 U B 158 81.205 103.970 58.262 1.00 29.60 O
ATOM 4 OP2 U B 158 78.745 103.756 58.959 1.00 26.94 O
ATOM 5 O5' U B 158 79.836 101.996 57.577 1.00 29.48 O
ATOM 6 C5' U B 158 80.950 101.279 57.014 1.00 28.86 C
ATOM 7 C4' U B 158 80.473 100.010 56.350 1.00 29.59 C
ATOM 8 O4' U B 158 80.094 99.023 57.348 1.00 31.06 O
ATOM 9 C3' U B 158 79.225 100.127 55.490 1.00 29.02 C
ATOM 10 O3' U B 158 79.486 100.659 54.204 1.00 28.63 O
ATOM 11 C2' U B 158 78.771 98.679 55.395 1.00 29.74 C
ATOM 12 O2' U B 158 79.504 97.928 54.459 1.00 29.97 O
ATOM 13 C1' U B 158 79.091 98.170 56.801 1.00 31.71 C
ATOM 14 N1 U B 158 77.892 98.184 57.654 1.00 33.42 N
ATOM 15 C2 U B 158 76.959 97.184 57.437 1.00 32.92 C
ATOM 16 O2 U B 158 77.120 96.298 56.621 1.00 34.55 O
ATOM 17 N3 U B 158 75.838 97.257 58.217 1.00 32.63 N
ATOM 18 C4 U B 158 75.568 98.189 59.190 1.00 33.19 C
ATOM 19 O4 U B 158 74.539 98.083 59.849 1.00 34.14 O
ATOM 20 C5 U B 158 76.585 99.181 59.372 1.00 32.85 C
ATOM 21 C6 U B 158 77.682 99.148 58.617 1.00 32.76 C
ATOM 22 P C B 159 78.354 101.513 53.457 1.00 28.57 P
ATOM 23 OP1 C B 159 78.644 101.469 52.008 1.00 29.28 O
ATOM 24 OP2 C B 159 78.245 102.812 54.147 1.00 30.89 O
ATOM 25 O5' C B 159 76.993 100.738 53.735 1.00 27.85 O
TER
ATOM 2 P C A 159 78.354 101.513 53.457 1.00 28.57 P
ATOM 3 OP1 C A 159 78.644 101.469 52.008 1.00 29.28 O
ATOM 4 OP2 C A 159 78.245 102.812 54.147 1.00 30.89 O
ATOM 5 O5' C A 159 76.993 100.738 53.735 1.00 27.85 O
ATOM 6 C5' C A 159 76.658 99.531 53.041 1.00 27.88 C
ATOM 7 C4' C A 159 75.336 99.006 53.542 1.00 29.61 C
ATOM 8 O4' C A 159 75.443 98.687 54.961 1.00 32.44 O
ATOM 9 C3' C A 159 74.186 99.994 53.483 1.00 28.39 C
ATOM 10 O3' C A 159 73.608 100.037 52.191 1.00 28.05 O
ATOM 11 C2' C A 159 73.237 99.424 54.522 1.00 28.98 C
ATOM 12 O2' C A 159 72.596 98.263 54.046 1.00 32.83 O
ATOM 13 C1' C A 159 74.217 98.986 55.611 1.00 30.57 C
ATOM 14 N1 C A 159 74.442 100.041 56.621 1.00 29.05 N
ATOM 15 C2 C A 159 73.480 100.229 57.628 1.00 29.30 C
ATOM 16 O2 C A 159 72.517 99.457 57.695 1.00 30.12 O
ATOM 17 N3 C A 159 73.630 101.242 58.508 1.00 29.81 N
ATOM 18 C4 C A 159 74.697 102.036 58.434 1.00 28.79 C
ATOM 19 N4 C A 159 74.784 103.036 59.310 1.00 27.71 N
ATOM 20 C5 C A 159 75.716 101.843 57.453 1.00 28.13 C
ATOM 21 C6 C A 159 75.549 100.845 56.574 1.00 29.20 C
ATOM 22 P U A 160 72.926 101.393 51.669 1.00 30.80 P
ATOM 23 OP1 U A 160 72.181 101.061 50.428 1.00 32.13 O
ATOM 24 OP2 U A 160 73.958 102.460 51.640 1.00 32.62 O
ATOM 25 O5' U A 160 71.866 101.763 52.794 1.00 29.08 O
TER
ATOM 1 O3' A B 157 80.552 102.316 59.968 1.00 29.17 O
ATOM 2 P U B 158 80.057 103.125 58.676 1.00 30.08 P
ATOM 3 OP1 U B 158 81.205 103.970 58.262 1.00 29.60 O
ATOM 4 OP2 U B 158 78.745 103.756 58.959 1.00 26.94 O
ATOM 5 O5' U B 158 79.836 101.996 57.577 1.00 29.48 O
ATOM 6 C5' U B 158 80.950 101.279 57.014 1.00 28.86 C
ATOM 7 C4' U B 158 80.473 100.010 56.350 1.00 29.59 C
ATOM 8 O4' U B 158 80.094 99.023 57.348 1.00 31.06 O
ATOM 9 C3' U B 158 79.225 100.127 55.490 1.00 29.02 C
ATOM 10 O3' U B 158 79.486 100.659 54.204 1.00 28.63 O
ATOM 11 C2' U B 158 78.771 98.679 55.395 1.00 29.74 C
ATOM 12 O2' U B 158 79.504 97.928 54.459 1.00 29.97 O
ATOM 13 C1' U B 158 79.091 98.170 56.801 1.00 31.71 C
ATOM 14 N1 U B 158 77.892 98.184 57.654 1.00 33.42 N
ATOM 15 C2 U B 158 76.959 97.184 57.437 1.00 32.92 C
ATOM 16 O2 U B 158 77.120 96.298 56.621 1.00 34.55 O
ATOM 17 N3 U B 158 75.838 97.257 58.217 1.00 32.63 N
ATOM 18 C4 U B 158 75.568 98.189 59.190 1.00 33.19 C
ATOM 19 O4 U B 158 74.539 98.083 59.849 1.00 34.14 O
ATOM 20 C5 U B 158 76.585 99.181 59.372 1.00 32.85 C
ATOM 21 C6 U B 158 77.682 99.148 58.617 1.00 32.76 C
ATOM 22 P C B 159 78.354 101.513 53.457 1.00 28.57 P
ATOM 23 OP1 C B 159 78.644 101.469 52.008 1.00 29.28 O
ATOM 24 OP2 C B 159 78.245 102.812 54.147 1.00 30.89 O
ATOM 25 O5' C B 159 76.993 100.738 53.735 1.00 27.85 O
TER
Atoms:
C2: (73.480,100.229,57.628)
OP1: (78.644,101.469,52.008)
OP2: (78.245,102.812,54.147)
C4: (74.697,102.036,58.434)
O5': (76.993,100.738,53.735)
C3': (74.186,99.994,53.483)
C1': (74.217,98.986,55.611)
O4': (75.443,98.687,54.961)
C5': (76.658,99.531,53.041)
P: (78.354,101.513,53.457)
O2: (72.517,99.457,57.695)
C4': (75.336,99.006,53.542)
C2': (73.237,99.424,54.522)
O2': (72.596,98.263,54.046)
N1: (74.442,100.041,56.621)
N3: (73.630,101.242,58.508)
N4: (74.784,103.036,59.310)
C6: (75.549,100.845,56.574)
C5: (75.716,101.843,57.453)
O3': (73.608,100.037,52.191)
OP1: (78.644,101.469,52.008)
OP2: (78.245,102.812,54.147)
C4: (74.697,102.036,58.434)
O5': (76.993,100.738,53.735)
C3': (74.186,99.994,53.483)
C1': (74.217,98.986,55.611)
O4': (75.443,98.687,54.961)
C5': (76.658,99.531,53.041)
P: (78.354,101.513,53.457)
O2: (72.517,99.457,57.695)
C4': (75.336,99.006,53.542)
C2': (73.237,99.424,54.522)
O2': (72.596,98.263,54.046)
N1: (74.442,100.041,56.621)
N3: (73.630,101.242,58.508)
N4: (74.784,103.036,59.310)
C6: (75.549,100.845,56.574)
C5: (75.716,101.843,57.453)
O3': (73.608,100.037,52.191)
C4: (75.568,98.189,59.190)
N3: (75.838,97.257,58.217)
OP1: (81.205,103.970,58.262)
OP2: (78.745,103.756,58.959)
C2: (76.959,97.184,57.437)
C1': (79.091,98.170,56.801)
C3': (79.225,100.127,55.490)
O5': (79.836,101.996,57.577)
O4': (80.094,99.023,57.348)
C5': (80.950,101.279,57.014)
P: (80.057,103.125,58.676)
C4': (80.473,100.010,56.350)
C2': (78.771,98.679,55.395)
O2': (79.504,97.928,54.459)
N1: (77.892,98.184,57.654)
O4: (74.539,98.083,59.849)
O2: (77.120,96.298,56.621)
C6: (77.682,99.148,58.617)
C5: (76.585,99.181,59.372)
O3': (79.486,100.659,54.204)
N3: (75.838,97.257,58.217)
OP1: (81.205,103.970,58.262)
OP2: (78.745,103.756,58.959)
C2: (76.959,97.184,57.437)
C1': (79.091,98.170,56.801)
C3': (79.225,100.127,55.490)
O5': (79.836,101.996,57.577)
O4': (80.094,99.023,57.348)
C5': (80.950,101.279,57.014)
P: (80.057,103.125,58.676)
C4': (80.473,100.010,56.350)
C2': (78.771,98.679,55.395)
O2': (79.504,97.928,54.459)
N1: (77.892,98.184,57.654)
O4: (74.539,98.083,59.849)
O2: (77.120,96.298,56.621)
C6: (77.682,99.148,58.617)
C5: (76.585,99.181,59.372)
O3': (79.486,100.659,54.204)
Image (generated by PyMOL):