Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02432:02431
Extra
PDB:
ATOM 1 O3' U A2431 74.682 123.853 120.192 1.00 43.12 O
ATOM 2 P C A2432 75.236 123.869 121.697 1.00 45.39 P
ATOM 3 OP1 C A2432 74.033 123.720 122.561 1.00 43.73 O
ATOM 4 OP2 C A2432 76.124 125.058 121.865 1.00 43.24 O
ATOM 5 O5' C A2432 76.116 122.542 121.801 1.00 42.08 O
ATOM 6 C5' C A2432 75.491 121.252 121.788 1.00 41.82 C
ATOM 7 C4' C A2432 76.525 120.163 121.657 1.00 42.06 C
ATOM 8 O4' C A2432 77.291 120.392 120.448 1.00 41.48 O
ATOM 9 C3' C A2432 77.595 120.080 122.736 1.00 43.41 C
ATOM 10 O3' C A2432 77.149 119.402 123.900 1.00 44.91 O
ATOM 11 C2' C A2432 78.677 119.288 122.021 1.00 42.13 C
ATOM 12 O2' C A2432 78.356 117.918 121.900 1.00 43.56 O
ATOM 13 C1' C A2432 78.614 119.915 120.632 1.00 40.65 C
ATOM 14 N1 C A2432 79.545 121.044 120.513 1.00 38.99 N
ATOM 15 C2 C A2432 80.875 120.775 120.197 1.00 38.79 C
ATOM 16 O2 C A2432 81.225 119.591 120.028 1.00 38.47 O
ATOM 17 N3 C A2432 81.747 121.804 120.085 1.00 38.21 N
ATOM 18 C4 C A2432 81.329 123.057 120.279 1.00 37.76 C
ATOM 19 N4 C A2432 82.222 124.035 120.156 1.00 39.08 N
ATOM 20 C5 C A2432 79.979 123.359 120.606 1.00 36.84 C
ATOM 21 C6 C A2432 79.128 122.334 120.711 1.00 38.81 C
ATOM 22 P G A2433 77.542 119.969 125.354 1.00 46.78 P
ATOM 23 OP1 G A2433 77.076 118.939 126.323 1.00 46.63 O
ATOM 24 OP2 G A2433 77.053 121.369 125.481 1.00 45.50 O
ATOM 25 O5' G A2433 79.138 119.999 125.360 1.00 45.03 O
TER
ATOM 1 O3' U B2430 79.052 127.274 116.995 1.00 36.67 O
ATOM 2 P U B2431 78.474 126.969 118.468 1.00 38.84 P
ATOM 3 OP1 U B2431 77.654 128.138 118.871 1.00 39.26 O
ATOM 4 OP2 U B2431 79.600 126.541 119.326 1.00 40.96 O
ATOM 5 O5' U B2431 77.503 125.721 118.279 1.00 40.12 O
ATOM 6 C5' U B2431 76.083 125.900 118.128 1.00 40.27 C
ATOM 7 C4' U B2431 75.393 124.561 117.980 1.00 41.03 C
ATOM 8 O4' U B2431 75.949 123.841 116.847 1.00 39.83 O
ATOM 9 C3' U B2431 75.567 123.582 119.126 1.00 41.43 C
ATOM 10 O3' U B2431 74.682 123.853 120.192 1.00 43.12 O
ATOM 11 C2' U B2431 75.222 122.262 118.462 1.00 41.56 C
ATOM 12 O2' U B2431 73.828 122.102 118.292 1.00 39.38 O
ATOM 13 C1' U B2431 75.886 122.444 117.098 1.00 41.20 C
ATOM 14 N1 U B2431 77.247 121.882 117.052 1.00 44.27 N
ATOM 15 C2 U B2431 77.371 120.518 116.827 1.00 44.78 C
ATOM 16 O2 U B2431 76.414 119.779 116.698 1.00 47.34 O
ATOM 17 N3 U B2431 78.661 120.051 116.773 1.00 43.95 N
ATOM 18 C4 U B2431 79.816 120.785 116.927 1.00 44.47 C
ATOM 19 O4 U B2431 80.907 120.221 116.827 1.00 45.23 O
ATOM 20 C5 U B2431 79.610 122.179 117.171 1.00 44.24 C
ATOM 21 C6 U B2431 78.365 122.669 117.222 1.00 44.07 C
ATOM 22 P C B2432 75.236 123.869 121.697 1.00 45.39 P
ATOM 23 OP1 C B2432 74.033 123.720 122.561 1.00 43.73 O
ATOM 24 OP2 C B2432 76.124 125.058 121.865 1.00 43.24 O
ATOM 25 O5' C B2432 76.116 122.542 121.801 1.00 42.08 O
TER
ATOM 2 P C A2432 75.236 123.869 121.697 1.00 45.39 P
ATOM 3 OP1 C A2432 74.033 123.720 122.561 1.00 43.73 O
ATOM 4 OP2 C A2432 76.124 125.058 121.865 1.00 43.24 O
ATOM 5 O5' C A2432 76.116 122.542 121.801 1.00 42.08 O
ATOM 6 C5' C A2432 75.491 121.252 121.788 1.00 41.82 C
ATOM 7 C4' C A2432 76.525 120.163 121.657 1.00 42.06 C
ATOM 8 O4' C A2432 77.291 120.392 120.448 1.00 41.48 O
ATOM 9 C3' C A2432 77.595 120.080 122.736 1.00 43.41 C
ATOM 10 O3' C A2432 77.149 119.402 123.900 1.00 44.91 O
ATOM 11 C2' C A2432 78.677 119.288 122.021 1.00 42.13 C
ATOM 12 O2' C A2432 78.356 117.918 121.900 1.00 43.56 O
ATOM 13 C1' C A2432 78.614 119.915 120.632 1.00 40.65 C
ATOM 14 N1 C A2432 79.545 121.044 120.513 1.00 38.99 N
ATOM 15 C2 C A2432 80.875 120.775 120.197 1.00 38.79 C
ATOM 16 O2 C A2432 81.225 119.591 120.028 1.00 38.47 O
ATOM 17 N3 C A2432 81.747 121.804 120.085 1.00 38.21 N
ATOM 18 C4 C A2432 81.329 123.057 120.279 1.00 37.76 C
ATOM 19 N4 C A2432 82.222 124.035 120.156 1.00 39.08 N
ATOM 20 C5 C A2432 79.979 123.359 120.606 1.00 36.84 C
ATOM 21 C6 C A2432 79.128 122.334 120.711 1.00 38.81 C
ATOM 22 P G A2433 77.542 119.969 125.354 1.00 46.78 P
ATOM 23 OP1 G A2433 77.076 118.939 126.323 1.00 46.63 O
ATOM 24 OP2 G A2433 77.053 121.369 125.481 1.00 45.50 O
ATOM 25 O5' G A2433 79.138 119.999 125.360 1.00 45.03 O
TER
ATOM 1 O3' U B2430 79.052 127.274 116.995 1.00 36.67 O
ATOM 2 P U B2431 78.474 126.969 118.468 1.00 38.84 P
ATOM 3 OP1 U B2431 77.654 128.138 118.871 1.00 39.26 O
ATOM 4 OP2 U B2431 79.600 126.541 119.326 1.00 40.96 O
ATOM 5 O5' U B2431 77.503 125.721 118.279 1.00 40.12 O
ATOM 6 C5' U B2431 76.083 125.900 118.128 1.00 40.27 C
ATOM 7 C4' U B2431 75.393 124.561 117.980 1.00 41.03 C
ATOM 8 O4' U B2431 75.949 123.841 116.847 1.00 39.83 O
ATOM 9 C3' U B2431 75.567 123.582 119.126 1.00 41.43 C
ATOM 10 O3' U B2431 74.682 123.853 120.192 1.00 43.12 O
ATOM 11 C2' U B2431 75.222 122.262 118.462 1.00 41.56 C
ATOM 12 O2' U B2431 73.828 122.102 118.292 1.00 39.38 O
ATOM 13 C1' U B2431 75.886 122.444 117.098 1.00 41.20 C
ATOM 14 N1 U B2431 77.247 121.882 117.052 1.00 44.27 N
ATOM 15 C2 U B2431 77.371 120.518 116.827 1.00 44.78 C
ATOM 16 O2 U B2431 76.414 119.779 116.698 1.00 47.34 O
ATOM 17 N3 U B2431 78.661 120.051 116.773 1.00 43.95 N
ATOM 18 C4 U B2431 79.816 120.785 116.927 1.00 44.47 C
ATOM 19 O4 U B2431 80.907 120.221 116.827 1.00 45.23 O
ATOM 20 C5 U B2431 79.610 122.179 117.171 1.00 44.24 C
ATOM 21 C6 U B2431 78.365 122.669 117.222 1.00 44.07 C
ATOM 22 P C B2432 75.236 123.869 121.697 1.00 45.39 P
ATOM 23 OP1 C B2432 74.033 123.720 122.561 1.00 43.73 O
ATOM 24 OP2 C B2432 76.124 125.058 121.865 1.00 43.24 O
ATOM 25 O5' C B2432 76.116 122.542 121.801 1.00 42.08 O
TER
Atoms:
C2: (80.875,120.775,120.197)
OP1: (74.033,123.720,122.561)
OP2: (76.124,125.058,121.865)
C4: (81.329,123.057,120.279)
O5': (76.116,122.542,121.801)
C3': (77.595,120.080,122.736)
C1': (78.614,119.915,120.632)
O4': (77.291,120.392,120.448)
C5': (75.491,121.252,121.788)
P: (75.236,123.869,121.697)
O2: (81.225,119.591,120.028)
C4': (76.525,120.163,121.657)
C2': (78.677,119.288,122.021)
O2': (78.356,117.918,121.900)
N1: (79.545,121.044,120.513)
N3: (81.747,121.804,120.085)
N4: (82.222,124.035,120.156)
C6: (79.128,122.334,120.711)
C5: (79.979,123.359,120.606)
O3': (77.149,119.402,123.900)
OP1: (74.033,123.720,122.561)
OP2: (76.124,125.058,121.865)
C4: (81.329,123.057,120.279)
O5': (76.116,122.542,121.801)
C3': (77.595,120.080,122.736)
C1': (78.614,119.915,120.632)
O4': (77.291,120.392,120.448)
C5': (75.491,121.252,121.788)
P: (75.236,123.869,121.697)
O2: (81.225,119.591,120.028)
C4': (76.525,120.163,121.657)
C2': (78.677,119.288,122.021)
O2': (78.356,117.918,121.900)
N1: (79.545,121.044,120.513)
N3: (81.747,121.804,120.085)
N4: (82.222,124.035,120.156)
C6: (79.128,122.334,120.711)
C5: (79.979,123.359,120.606)
O3': (77.149,119.402,123.900)
C4: (79.816,120.785,116.927)
N3: (78.661,120.051,116.773)
OP1: (77.654,128.138,118.871)
OP2: (79.600,126.541,119.326)
C2: (77.371,120.518,116.827)
C1': (75.886,122.444,117.098)
C3': (75.567,123.582,119.126)
O5': (77.503,125.721,118.279)
O4': (75.949,123.841,116.847)
C5': (76.083,125.900,118.128)
P: (78.474,126.969,118.468)
C4': (75.393,124.561,117.980)
C2': (75.222,122.262,118.462)
O2': (73.828,122.102,118.292)
N1: (77.247,121.882,117.052)
O4: (80.907,120.221,116.827)
O2: (76.414,119.779,116.698)
C6: (78.365,122.669,117.222)
C5: (79.610,122.179,117.171)
O3': (74.682,123.853,120.192)
N3: (78.661,120.051,116.773)
OP1: (77.654,128.138,118.871)
OP2: (79.600,126.541,119.326)
C2: (77.371,120.518,116.827)
C1': (75.886,122.444,117.098)
C3': (75.567,123.582,119.126)
O5': (77.503,125.721,118.279)
O4': (75.949,123.841,116.847)
C5': (76.083,125.900,118.128)
P: (78.474,126.969,118.468)
C4': (75.393,124.561,117.980)
C2': (75.222,122.262,118.462)
O2': (73.828,122.102,118.292)
N1: (77.247,121.882,117.052)
O4: (80.907,120.221,116.827)
O2: (76.414,119.779,116.698)
C6: (78.365,122.669,117.222)
C5: (79.610,122.179,117.171)
O3': (74.682,123.853,120.192)
Image (generated by PyMOL):