Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0127:0126
Extra
PDB:
ATOM 1 O3' U A 126 94.409 145.567 6.946 1.00 86.81 O
ATOM 2 P C A 127 95.661 145.072 7.816 1.00 87.11 P
ATOM 3 OP1 C A 127 96.424 146.289 8.196 1.00 86.41 O
ATOM 4 OP2 C A 127 96.339 143.991 7.056 1.00 86.59 O
ATOM 5 O5' C A 127 95.016 144.452 9.136 1.00 87.11 O
ATOM 6 C5' C A 127 94.408 145.292 10.136 1.00 84.16 C
ATOM 7 C4' C A 127 94.851 144.860 11.515 1.00 83.02 C
ATOM 8 O4' C A 127 94.415 143.491 11.742 1.00 83.57 O
ATOM 9 C3' C A 127 96.358 144.871 11.766 1.00 82.25 C
ATOM 10 O3' C A 127 96.635 145.207 13.124 1.00 79.03 O
ATOM 11 C2' C A 127 96.750 143.422 11.511 1.00 83.30 C
ATOM 12 O2' C A 127 97.927 143.033 12.192 1.00 84.96 O
ATOM 13 C1' C A 127 95.531 142.681 12.055 1.00 84.09 C
ATOM 14 N1 C A 127 95.345 141.361 11.429 1.00 85.08 N
ATOM 15 C2 C A 127 95.791 140.214 12.110 1.00 85.38 C
ATOM 16 O2 C A 127 96.313 140.338 13.232 1.00 84.76 O
ATOM 17 N3 C A 127 95.639 139.002 11.525 1.00 86.37 N
ATOM 18 C4 C A 127 95.066 138.908 10.320 1.00 86.99 C
ATOM 19 N4 C A 127 94.933 137.691 9.779 1.00 87.17 N
ATOM 20 C5 C A 127 94.601 140.056 9.614 1.00 86.19 C
ATOM 21 C6 C A 127 94.757 141.248 10.198 1.00 85.33 C
ATOM 22 P G A 128 96.891 146.742 13.522 1.00 76.11 P
ATOM 23 OP1 G A 128 97.856 147.309 12.542 1.00 75.99 O
ATOM 24 OP2 G A 128 97.201 146.801 14.973 1.00 76.31 O
ATOM 25 O5' G A 128 95.467 147.409 13.264 1.00 71.86 O
TER
ATOM 1 O3' U B 125 91.570 139.640 6.746 1.00 69.97 O
ATOM 2 P U B 126 93.032 140.072 6.196 1.00 73.56 P
ATOM 3 OP1 U B 126 92.963 139.916 4.726 1.00 73.14 O
ATOM 4 OP2 U B 126 94.078 139.335 6.954 1.00 72.91 O
ATOM 5 O5' U B 126 93.148 141.637 6.529 1.00 77.25 O
ATOM 6 C5' U B 126 93.911 142.541 5.674 1.00 82.33 C
ATOM 7 C4' U B 126 93.249 143.913 5.589 1.00 86.78 C
ATOM 8 O4' U B 126 91.839 143.742 5.307 1.00 90.27 O
ATOM 9 C3' U B 126 93.229 144.769 6.852 1.00 88.45 C
ATOM 10 O3' U B 126 94.409 145.567 6.946 1.00 86.81 O
ATOM 11 C2' U B 126 92.068 145.737 6.599 1.00 91.40 C
ATOM 12 O2' U B 126 92.443 146.938 5.953 1.00 92.83 O
ATOM 13 C1' U B 126 91.161 144.932 5.660 1.00 94.01 C
ATOM 14 N1 U B 126 89.821 144.605 6.174 1.00 98.57 N
ATOM 15 C2 U B 126 88.766 144.583 5.263 1.00100.61 C
ATOM 16 O2 U B 126 88.909 144.809 4.063 1.00 99.47 O
ATOM 17 N3 U B 126 87.537 144.284 5.812 1.00102.54 N
ATOM 18 C4 U B 126 87.257 144.006 7.145 1.00102.61 C
ATOM 19 O4 U B 126 86.098 143.743 7.486 1.00102.70 O
ATOM 20 C5 U B 126 88.395 144.045 8.012 1.00101.99 C
ATOM 21 C6 U B 126 89.604 144.334 7.513 1.00100.51 C
ATOM 22 P C B 127 95.661 145.072 7.816 1.00 87.11 P
ATOM 23 OP1 C B 127 96.424 146.289 8.196 1.00 86.41 O
ATOM 24 OP2 C B 127 96.339 143.991 7.056 1.00 86.59 O
ATOM 25 O5' C B 127 95.016 144.452 9.136 1.00 87.11 O
TER
ATOM 2 P C A 127 95.661 145.072 7.816 1.00 87.11 P
ATOM 3 OP1 C A 127 96.424 146.289 8.196 1.00 86.41 O
ATOM 4 OP2 C A 127 96.339 143.991 7.056 1.00 86.59 O
ATOM 5 O5' C A 127 95.016 144.452 9.136 1.00 87.11 O
ATOM 6 C5' C A 127 94.408 145.292 10.136 1.00 84.16 C
ATOM 7 C4' C A 127 94.851 144.860 11.515 1.00 83.02 C
ATOM 8 O4' C A 127 94.415 143.491 11.742 1.00 83.57 O
ATOM 9 C3' C A 127 96.358 144.871 11.766 1.00 82.25 C
ATOM 10 O3' C A 127 96.635 145.207 13.124 1.00 79.03 O
ATOM 11 C2' C A 127 96.750 143.422 11.511 1.00 83.30 C
ATOM 12 O2' C A 127 97.927 143.033 12.192 1.00 84.96 O
ATOM 13 C1' C A 127 95.531 142.681 12.055 1.00 84.09 C
ATOM 14 N1 C A 127 95.345 141.361 11.429 1.00 85.08 N
ATOM 15 C2 C A 127 95.791 140.214 12.110 1.00 85.38 C
ATOM 16 O2 C A 127 96.313 140.338 13.232 1.00 84.76 O
ATOM 17 N3 C A 127 95.639 139.002 11.525 1.00 86.37 N
ATOM 18 C4 C A 127 95.066 138.908 10.320 1.00 86.99 C
ATOM 19 N4 C A 127 94.933 137.691 9.779 1.00 87.17 N
ATOM 20 C5 C A 127 94.601 140.056 9.614 1.00 86.19 C
ATOM 21 C6 C A 127 94.757 141.248 10.198 1.00 85.33 C
ATOM 22 P G A 128 96.891 146.742 13.522 1.00 76.11 P
ATOM 23 OP1 G A 128 97.856 147.309 12.542 1.00 75.99 O
ATOM 24 OP2 G A 128 97.201 146.801 14.973 1.00 76.31 O
ATOM 25 O5' G A 128 95.467 147.409 13.264 1.00 71.86 O
TER
ATOM 1 O3' U B 125 91.570 139.640 6.746 1.00 69.97 O
ATOM 2 P U B 126 93.032 140.072 6.196 1.00 73.56 P
ATOM 3 OP1 U B 126 92.963 139.916 4.726 1.00 73.14 O
ATOM 4 OP2 U B 126 94.078 139.335 6.954 1.00 72.91 O
ATOM 5 O5' U B 126 93.148 141.637 6.529 1.00 77.25 O
ATOM 6 C5' U B 126 93.911 142.541 5.674 1.00 82.33 C
ATOM 7 C4' U B 126 93.249 143.913 5.589 1.00 86.78 C
ATOM 8 O4' U B 126 91.839 143.742 5.307 1.00 90.27 O
ATOM 9 C3' U B 126 93.229 144.769 6.852 1.00 88.45 C
ATOM 10 O3' U B 126 94.409 145.567 6.946 1.00 86.81 O
ATOM 11 C2' U B 126 92.068 145.737 6.599 1.00 91.40 C
ATOM 12 O2' U B 126 92.443 146.938 5.953 1.00 92.83 O
ATOM 13 C1' U B 126 91.161 144.932 5.660 1.00 94.01 C
ATOM 14 N1 U B 126 89.821 144.605 6.174 1.00 98.57 N
ATOM 15 C2 U B 126 88.766 144.583 5.263 1.00100.61 C
ATOM 16 O2 U B 126 88.909 144.809 4.063 1.00 99.47 O
ATOM 17 N3 U B 126 87.537 144.284 5.812 1.00102.54 N
ATOM 18 C4 U B 126 87.257 144.006 7.145 1.00102.61 C
ATOM 19 O4 U B 126 86.098 143.743 7.486 1.00102.70 O
ATOM 20 C5 U B 126 88.395 144.045 8.012 1.00101.99 C
ATOM 21 C6 U B 126 89.604 144.334 7.513 1.00100.51 C
ATOM 22 P C B 127 95.661 145.072 7.816 1.00 87.11 P
ATOM 23 OP1 C B 127 96.424 146.289 8.196 1.00 86.41 O
ATOM 24 OP2 C B 127 96.339 143.991 7.056 1.00 86.59 O
ATOM 25 O5' C B 127 95.016 144.452 9.136 1.00 87.11 O
TER
Atoms:
C2: (95.791,140.214,12.110)
OP1: (96.424,146.289,8.196)
OP2: (96.339,143.991,7.056)
C4: (95.066,138.908,10.320)
O5': (95.016,144.452,9.136)
C3': (96.358,144.871,11.766)
C1': (95.531,142.681,12.055)
O4': (94.415,143.491,11.742)
C5': (94.408,145.292,10.136)
P: (95.661,145.072,7.816)
O2: (96.313,140.338,13.232)
C4': (94.851,144.860,11.515)
C2': (96.750,143.422,11.511)
O2': (97.927,143.033,12.192)
N1: (95.345,141.361,11.429)
N3: (95.639,139.002,11.525)
N4: (94.933,137.691,9.779)
C6: (94.757,141.248,10.198)
C5: (94.601,140.056,9.614)
O3': (96.635,145.207,13.124)
OP1: (96.424,146.289,8.196)
OP2: (96.339,143.991,7.056)
C4: (95.066,138.908,10.320)
O5': (95.016,144.452,9.136)
C3': (96.358,144.871,11.766)
C1': (95.531,142.681,12.055)
O4': (94.415,143.491,11.742)
C5': (94.408,145.292,10.136)
P: (95.661,145.072,7.816)
O2: (96.313,140.338,13.232)
C4': (94.851,144.860,11.515)
C2': (96.750,143.422,11.511)
O2': (97.927,143.033,12.192)
N1: (95.345,141.361,11.429)
N3: (95.639,139.002,11.525)
N4: (94.933,137.691,9.779)
C6: (94.757,141.248,10.198)
C5: (94.601,140.056,9.614)
O3': (96.635,145.207,13.124)
C4: (87.257,144.006,7.145)
N3: (87.537,144.284,5.812)
OP1: (92.963,139.916,4.726)
OP2: (94.078,139.335,6.954)
C2: (88.766,144.583,5.263)
C1': (91.161,144.932,5.660)
C3': (93.229,144.769,6.852)
O5': (93.148,141.637,6.529)
O4': (91.839,143.742,5.307)
C5': (93.911,142.541,5.674)
P: (93.032,140.072,6.196)
C4': (93.249,143.913,5.589)
C2': (92.068,145.737,6.599)
O2': (92.443,146.938,5.953)
N1: (89.821,144.605,6.174)
O4: (86.098,143.743,7.486)
O2: (88.909,144.809,4.063)
C6: (89.604,144.334,7.513)
C5: (88.395,144.045,8.012)
O3': (94.409,145.567,6.946)
N3: (87.537,144.284,5.812)
OP1: (92.963,139.916,4.726)
OP2: (94.078,139.335,6.954)
C2: (88.766,144.583,5.263)
C1': (91.161,144.932,5.660)
C3': (93.229,144.769,6.852)
O5': (93.148,141.637,6.529)
O4': (91.839,143.742,5.307)
C5': (93.911,142.541,5.674)
P: (93.032,140.072,6.196)
C4': (93.249,143.913,5.589)
C2': (92.068,145.737,6.599)
O2': (92.443,146.938,5.953)
N1: (89.821,144.605,6.174)
O4: (86.098,143.743,7.486)
O2: (88.909,144.809,4.063)
C6: (89.604,144.334,7.513)
C5: (88.395,144.045,8.012)
O3': (94.409,145.567,6.946)
Image (generated by PyMOL):