Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01379:01378
Extra
PDB:
ATOM 1 O3' U A1378 63.587 170.753 65.949 1.00 46.81 O
ATOM 2 P C A1379 63.297 172.292 65.583 1.00 49.50 P
ATOM 3 OP1 C A1379 63.338 173.051 66.857 1.00 51.01 O
ATOM 4 OP2 C A1379 62.103 172.392 64.722 1.00 47.37 O
ATOM 5 O5' C A1379 64.579 172.719 64.747 1.00 50.27 O
ATOM 6 C5' C A1379 65.844 172.950 65.409 1.00 52.50 C
ATOM 7 C4' C A1379 66.608 174.020 64.681 1.00 53.24 C
ATOM 8 O4' C A1379 66.987 173.519 63.378 1.00 54.16 O
ATOM 9 C3' C A1379 65.783 175.268 64.423 1.00 52.49 C
ATOM 10 O3' C A1379 65.957 176.172 65.505 1.00 52.90 O
ATOM 11 C2' C A1379 66.381 175.802 63.134 1.00 54.26 C
ATOM 12 O2' C A1379 67.571 176.518 63.381 1.00 56.04 O
ATOM 13 C1' C A1379 66.739 174.506 62.396 1.00 54.98 C
ATOM 14 N1 C A1379 65.730 173.970 61.452 1.00 55.98 N
ATOM 15 C2 C A1379 65.268 174.779 60.389 1.00 56.39 C
ATOM 16 O2 C A1379 65.703 175.933 60.268 1.00 58.55 O
ATOM 17 N3 C A1379 64.359 174.273 59.525 1.00 55.44 N
ATOM 18 C4 C A1379 63.907 173.028 59.684 1.00 55.67 C
ATOM 19 N4 C A1379 63.007 172.577 58.815 1.00 56.30 N
ATOM 20 C5 C A1379 64.357 172.188 60.745 1.00 55.94 C
ATOM 21 C6 C A1379 65.256 172.694 61.598 1.00 55.96 C
ATOM 22 P C A1380 64.705 176.997 66.078 1.00 54.72 P
ATOM 23 OP1 C A1380 65.218 177.814 67.211 1.00 53.42 O
ATOM 24 OP2 C A1380 63.578 176.065 66.305 1.00 55.65 O
ATOM 25 O5' C A1380 64.310 177.973 64.883 1.00 54.26 O
TER
ATOM 1 O3' U B1377 62.363 169.208 60.029 1.00 39.38 O
ATOM 2 P U B1378 61.095 169.123 60.997 1.00 45.23 P
ATOM 3 OP1 U B1378 60.265 167.960 60.552 1.00 47.01 O
ATOM 4 OP2 U B1378 60.485 170.477 61.087 1.00 43.37 O
ATOM 5 O5' U B1378 61.696 168.707 62.410 1.00 43.35 O
ATOM 6 C5' U B1378 62.369 169.675 63.222 1.00 45.08 C
ATOM 7 C4' U B1378 63.084 169.008 64.366 1.00 43.02 C
ATOM 8 O4' U B1378 63.799 167.856 63.879 1.00 41.23 O
ATOM 9 C3' U B1378 64.159 169.886 64.971 1.00 42.86 C
ATOM 10 O3' U B1378 63.587 170.753 65.949 1.00 46.81 O
ATOM 11 C2' U B1378 65.116 168.873 65.587 1.00 41.95 C
ATOM 12 O2' U B1378 64.710 168.472 66.875 1.00 44.59 O
ATOM 13 C1' U B1378 64.968 167.680 64.638 1.00 39.50 C
ATOM 14 N1 U B1378 66.071 167.324 63.731 1.00 38.55 N
ATOM 15 C2 U B1378 66.593 168.280 62.880 1.00 37.86 C
ATOM 16 O2 U B1378 66.184 169.414 62.831 1.00 40.51 O
ATOM 17 N3 U B1378 67.615 167.845 62.077 1.00 37.95 N
ATOM 18 C4 U B1378 68.151 166.572 62.027 1.00 39.81 C
ATOM 19 O4 U B1378 69.021 166.309 61.197 1.00 39.35 O
ATOM 20 C5 U B1378 67.559 165.643 62.932 1.00 39.84 C
ATOM 21 C6 U B1378 66.565 166.042 63.734 1.00 39.47 C
ATOM 22 P C B1379 63.297 172.292 65.583 1.00 49.50 P
ATOM 23 OP1 C B1379 63.338 173.051 66.857 1.00 51.01 O
ATOM 24 OP2 C B1379 62.103 172.392 64.722 1.00 47.37 O
ATOM 25 O5' C B1379 64.579 172.719 64.747 1.00 50.27 O
TER
ATOM 2 P C A1379 63.297 172.292 65.583 1.00 49.50 P
ATOM 3 OP1 C A1379 63.338 173.051 66.857 1.00 51.01 O
ATOM 4 OP2 C A1379 62.103 172.392 64.722 1.00 47.37 O
ATOM 5 O5' C A1379 64.579 172.719 64.747 1.00 50.27 O
ATOM 6 C5' C A1379 65.844 172.950 65.409 1.00 52.50 C
ATOM 7 C4' C A1379 66.608 174.020 64.681 1.00 53.24 C
ATOM 8 O4' C A1379 66.987 173.519 63.378 1.00 54.16 O
ATOM 9 C3' C A1379 65.783 175.268 64.423 1.00 52.49 C
ATOM 10 O3' C A1379 65.957 176.172 65.505 1.00 52.90 O
ATOM 11 C2' C A1379 66.381 175.802 63.134 1.00 54.26 C
ATOM 12 O2' C A1379 67.571 176.518 63.381 1.00 56.04 O
ATOM 13 C1' C A1379 66.739 174.506 62.396 1.00 54.98 C
ATOM 14 N1 C A1379 65.730 173.970 61.452 1.00 55.98 N
ATOM 15 C2 C A1379 65.268 174.779 60.389 1.00 56.39 C
ATOM 16 O2 C A1379 65.703 175.933 60.268 1.00 58.55 O
ATOM 17 N3 C A1379 64.359 174.273 59.525 1.00 55.44 N
ATOM 18 C4 C A1379 63.907 173.028 59.684 1.00 55.67 C
ATOM 19 N4 C A1379 63.007 172.577 58.815 1.00 56.30 N
ATOM 20 C5 C A1379 64.357 172.188 60.745 1.00 55.94 C
ATOM 21 C6 C A1379 65.256 172.694 61.598 1.00 55.96 C
ATOM 22 P C A1380 64.705 176.997 66.078 1.00 54.72 P
ATOM 23 OP1 C A1380 65.218 177.814 67.211 1.00 53.42 O
ATOM 24 OP2 C A1380 63.578 176.065 66.305 1.00 55.65 O
ATOM 25 O5' C A1380 64.310 177.973 64.883 1.00 54.26 O
TER
ATOM 1 O3' U B1377 62.363 169.208 60.029 1.00 39.38 O
ATOM 2 P U B1378 61.095 169.123 60.997 1.00 45.23 P
ATOM 3 OP1 U B1378 60.265 167.960 60.552 1.00 47.01 O
ATOM 4 OP2 U B1378 60.485 170.477 61.087 1.00 43.37 O
ATOM 5 O5' U B1378 61.696 168.707 62.410 1.00 43.35 O
ATOM 6 C5' U B1378 62.369 169.675 63.222 1.00 45.08 C
ATOM 7 C4' U B1378 63.084 169.008 64.366 1.00 43.02 C
ATOM 8 O4' U B1378 63.799 167.856 63.879 1.00 41.23 O
ATOM 9 C3' U B1378 64.159 169.886 64.971 1.00 42.86 C
ATOM 10 O3' U B1378 63.587 170.753 65.949 1.00 46.81 O
ATOM 11 C2' U B1378 65.116 168.873 65.587 1.00 41.95 C
ATOM 12 O2' U B1378 64.710 168.472 66.875 1.00 44.59 O
ATOM 13 C1' U B1378 64.968 167.680 64.638 1.00 39.50 C
ATOM 14 N1 U B1378 66.071 167.324 63.731 1.00 38.55 N
ATOM 15 C2 U B1378 66.593 168.280 62.880 1.00 37.86 C
ATOM 16 O2 U B1378 66.184 169.414 62.831 1.00 40.51 O
ATOM 17 N3 U B1378 67.615 167.845 62.077 1.00 37.95 N
ATOM 18 C4 U B1378 68.151 166.572 62.027 1.00 39.81 C
ATOM 19 O4 U B1378 69.021 166.309 61.197 1.00 39.35 O
ATOM 20 C5 U B1378 67.559 165.643 62.932 1.00 39.84 C
ATOM 21 C6 U B1378 66.565 166.042 63.734 1.00 39.47 C
ATOM 22 P C B1379 63.297 172.292 65.583 1.00 49.50 P
ATOM 23 OP1 C B1379 63.338 173.051 66.857 1.00 51.01 O
ATOM 24 OP2 C B1379 62.103 172.392 64.722 1.00 47.37 O
ATOM 25 O5' C B1379 64.579 172.719 64.747 1.00 50.27 O
TER
Atoms:
C2: (65.268,174.779,60.389)
OP1: (63.338,173.051,66.857)
OP2: (62.103,172.392,64.722)
C4: (63.907,173.028,59.684)
O5': (64.579,172.719,64.747)
C3': (65.783,175.268,64.423)
C1': (66.739,174.506,62.396)
O4': (66.987,173.519,63.378)
C5': (65.844,172.950,65.409)
P: (63.297,172.292,65.583)
O2: (65.703,175.933,60.268)
C4': (66.608,174.020,64.681)
C2': (66.381,175.802,63.134)
O2': (67.571,176.518,63.381)
N1: (65.730,173.970,61.452)
N3: (64.359,174.273,59.525)
N4: (63.007,172.577,58.815)
C6: (65.256,172.694,61.598)
C5: (64.357,172.188,60.745)
O3': (65.957,176.172,65.505)
OP1: (63.338,173.051,66.857)
OP2: (62.103,172.392,64.722)
C4: (63.907,173.028,59.684)
O5': (64.579,172.719,64.747)
C3': (65.783,175.268,64.423)
C1': (66.739,174.506,62.396)
O4': (66.987,173.519,63.378)
C5': (65.844,172.950,65.409)
P: (63.297,172.292,65.583)
O2: (65.703,175.933,60.268)
C4': (66.608,174.020,64.681)
C2': (66.381,175.802,63.134)
O2': (67.571,176.518,63.381)
N1: (65.730,173.970,61.452)
N3: (64.359,174.273,59.525)
N4: (63.007,172.577,58.815)
C6: (65.256,172.694,61.598)
C5: (64.357,172.188,60.745)
O3': (65.957,176.172,65.505)
C4: (68.151,166.572,62.027)
N3: (67.615,167.845,62.077)
OP1: (60.265,167.960,60.552)
OP2: (60.485,170.477,61.087)
C2: (66.593,168.280,62.880)
C1': (64.968,167.680,64.638)
C3': (64.159,169.886,64.971)
O5': (61.696,168.707,62.410)
O4': (63.799,167.856,63.879)
C5': (62.369,169.675,63.222)
P: (61.095,169.123,60.997)
C4': (63.084,169.008,64.366)
C2': (65.116,168.873,65.587)
O2': (64.710,168.472,66.875)
N1: (66.071,167.324,63.731)
O4: (69.021,166.309,61.197)
O2: (66.184,169.414,62.831)
C6: (66.565,166.042,63.734)
C5: (67.559,165.643,62.932)
O3': (63.587,170.753,65.949)
N3: (67.615,167.845,62.077)
OP1: (60.265,167.960,60.552)
OP2: (60.485,170.477,61.087)
C2: (66.593,168.280,62.880)
C1': (64.968,167.680,64.638)
C3': (64.159,169.886,64.971)
O5': (61.696,168.707,62.410)
O4': (63.799,167.856,63.879)
C5': (62.369,169.675,63.222)
P: (61.095,169.123,60.997)
C4': (63.084,169.008,64.366)
C2': (65.116,168.873,65.587)
O2': (64.710,168.472,66.875)
N1: (66.071,167.324,63.731)
O4: (69.021,166.309,61.197)
O2: (66.184,169.414,62.831)
C6: (66.565,166.042,63.734)
C5: (67.559,165.643,62.932)
O3': (63.587,170.753,65.949)
Image (generated by PyMOL):