Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02432:02431
Extra
PDB:
ATOM 1 O3' U A2431 74.957 123.934 120.472 1.00 48.53 O
ATOM 2 P C A2432 75.441 123.917 122.000 1.00 48.45 P
ATOM 3 OP1 C A2432 74.225 123.720 122.836 1.00 47.67 O
ATOM 4 OP2 C A2432 76.299 125.110 122.222 1.00 49.01 O
ATOM 5 O5' C A2432 76.348 122.610 122.103 1.00 48.28 O
ATOM 6 C5' C A2432 75.767 121.296 122.003 1.00 48.13 C
ATOM 7 C4' C A2432 76.847 120.243 121.885 1.00 47.54 C
ATOM 8 O4' C A2432 77.652 120.514 120.710 1.00 45.88 O
ATOM 9 C3' C A2432 77.881 120.186 122.999 1.00 47.39 C
ATOM 10 O3' C A2432 77.435 119.490 124.145 1.00 49.99 O
ATOM 11 C2' C A2432 79.016 119.442 122.325 1.00 45.73 C
ATOM 12 O2' C A2432 78.751 118.060 122.202 1.00 43.46 O
ATOM 13 C1' C A2432 78.983 120.078 120.940 1.00 44.88 C
ATOM 14 N1 C A2432 79.880 121.235 120.851 1.00 42.79 N
ATOM 15 C2 C A2432 81.232 121.016 120.565 1.00 43.68 C
ATOM 16 O2 C A2432 81.645 119.843 120.456 1.00 40.91 O
ATOM 17 N3 C A2432 82.057 122.084 120.423 1.00 44.36 N
ATOM 18 C4 C A2432 81.578 123.322 120.579 1.00 43.53 C
ATOM 19 N4 C A2432 82.419 124.343 120.414 1.00 43.27 N
ATOM 20 C5 C A2432 80.215 123.566 120.906 1.00 42.99 C
ATOM 21 C6 C A2432 79.410 122.506 121.030 1.00 43.12 C
ATOM 22 P G A2433 77.815 120.048 125.599 1.00 53.17 P
ATOM 23 OP1 G A2433 77.327 119.016 126.554 1.00 52.08 O
ATOM 24 OP2 G A2433 77.332 121.450 125.714 1.00 50.87 O
ATOM 25 O5' G A2433 79.411 120.093 125.612 1.00 51.68 O
TER
ATOM 1 O3' U B2430 79.216 127.445 117.397 1.00 42.99 O
ATOM 2 P U B2431 78.701 127.156 118.893 1.00 45.70 P
ATOM 3 OP1 U B2431 77.858 128.284 119.348 1.00 45.75 O
ATOM 4 OP2 U B2431 79.883 126.771 119.686 1.00 48.05 O
ATOM 5 O5' U B2431 77.759 125.878 118.769 1.00 46.49 O
ATOM 6 C5' U B2431 76.363 126.007 118.463 1.00 45.87 C
ATOM 7 C4' U B2431 75.741 124.643 118.279 1.00 47.61 C
ATOM 8 O4' U B2431 76.409 123.935 117.200 1.00 47.06 O
ATOM 9 C3' U B2431 75.888 123.675 119.439 1.00 47.66 C
ATOM 10 O3' U B2431 74.957 123.934 120.472 1.00 48.53 O
ATOM 11 C2' U B2431 75.602 122.341 118.768 1.00 47.82 C
ATOM 12 O2' U B2431 74.223 122.117 118.561 1.00 45.48 O
ATOM 13 C1' U B2431 76.295 122.535 117.417 1.00 48.66 C
ATOM 14 N1 U B2431 77.629 121.908 117.365 1.00 51.30 N
ATOM 15 C2 U B2431 77.681 120.545 117.101 1.00 53.74 C
ATOM 16 O2 U B2431 76.687 119.869 116.881 1.00 57.20 O
ATOM 17 N3 U B2431 78.940 119.998 117.100 1.00 54.35 N
ATOM 18 C4 U B2431 80.130 120.649 117.317 1.00 53.38 C
ATOM 19 O4 U B2431 81.188 120.006 117.287 1.00 53.38 O
ATOM 20 C5 U B2431 79.999 122.055 117.564 1.00 52.24 C
ATOM 21 C6 U B2431 78.784 122.621 117.580 1.00 51.74 C
ATOM 22 P C B2432 75.441 123.917 122.000 1.00 48.45 P
ATOM 23 OP1 C B2432 74.225 123.720 122.836 1.00 47.67 O
ATOM 24 OP2 C B2432 76.299 125.110 122.222 1.00 49.01 O
ATOM 25 O5' C B2432 76.348 122.610 122.103 1.00 48.28 O
TER
ATOM 2 P C A2432 75.441 123.917 122.000 1.00 48.45 P
ATOM 3 OP1 C A2432 74.225 123.720 122.836 1.00 47.67 O
ATOM 4 OP2 C A2432 76.299 125.110 122.222 1.00 49.01 O
ATOM 5 O5' C A2432 76.348 122.610 122.103 1.00 48.28 O
ATOM 6 C5' C A2432 75.767 121.296 122.003 1.00 48.13 C
ATOM 7 C4' C A2432 76.847 120.243 121.885 1.00 47.54 C
ATOM 8 O4' C A2432 77.652 120.514 120.710 1.00 45.88 O
ATOM 9 C3' C A2432 77.881 120.186 122.999 1.00 47.39 C
ATOM 10 O3' C A2432 77.435 119.490 124.145 1.00 49.99 O
ATOM 11 C2' C A2432 79.016 119.442 122.325 1.00 45.73 C
ATOM 12 O2' C A2432 78.751 118.060 122.202 1.00 43.46 O
ATOM 13 C1' C A2432 78.983 120.078 120.940 1.00 44.88 C
ATOM 14 N1 C A2432 79.880 121.235 120.851 1.00 42.79 N
ATOM 15 C2 C A2432 81.232 121.016 120.565 1.00 43.68 C
ATOM 16 O2 C A2432 81.645 119.843 120.456 1.00 40.91 O
ATOM 17 N3 C A2432 82.057 122.084 120.423 1.00 44.36 N
ATOM 18 C4 C A2432 81.578 123.322 120.579 1.00 43.53 C
ATOM 19 N4 C A2432 82.419 124.343 120.414 1.00 43.27 N
ATOM 20 C5 C A2432 80.215 123.566 120.906 1.00 42.99 C
ATOM 21 C6 C A2432 79.410 122.506 121.030 1.00 43.12 C
ATOM 22 P G A2433 77.815 120.048 125.599 1.00 53.17 P
ATOM 23 OP1 G A2433 77.327 119.016 126.554 1.00 52.08 O
ATOM 24 OP2 G A2433 77.332 121.450 125.714 1.00 50.87 O
ATOM 25 O5' G A2433 79.411 120.093 125.612 1.00 51.68 O
TER
ATOM 1 O3' U B2430 79.216 127.445 117.397 1.00 42.99 O
ATOM 2 P U B2431 78.701 127.156 118.893 1.00 45.70 P
ATOM 3 OP1 U B2431 77.858 128.284 119.348 1.00 45.75 O
ATOM 4 OP2 U B2431 79.883 126.771 119.686 1.00 48.05 O
ATOM 5 O5' U B2431 77.759 125.878 118.769 1.00 46.49 O
ATOM 6 C5' U B2431 76.363 126.007 118.463 1.00 45.87 C
ATOM 7 C4' U B2431 75.741 124.643 118.279 1.00 47.61 C
ATOM 8 O4' U B2431 76.409 123.935 117.200 1.00 47.06 O
ATOM 9 C3' U B2431 75.888 123.675 119.439 1.00 47.66 C
ATOM 10 O3' U B2431 74.957 123.934 120.472 1.00 48.53 O
ATOM 11 C2' U B2431 75.602 122.341 118.768 1.00 47.82 C
ATOM 12 O2' U B2431 74.223 122.117 118.561 1.00 45.48 O
ATOM 13 C1' U B2431 76.295 122.535 117.417 1.00 48.66 C
ATOM 14 N1 U B2431 77.629 121.908 117.365 1.00 51.30 N
ATOM 15 C2 U B2431 77.681 120.545 117.101 1.00 53.74 C
ATOM 16 O2 U B2431 76.687 119.869 116.881 1.00 57.20 O
ATOM 17 N3 U B2431 78.940 119.998 117.100 1.00 54.35 N
ATOM 18 C4 U B2431 80.130 120.649 117.317 1.00 53.38 C
ATOM 19 O4 U B2431 81.188 120.006 117.287 1.00 53.38 O
ATOM 20 C5 U B2431 79.999 122.055 117.564 1.00 52.24 C
ATOM 21 C6 U B2431 78.784 122.621 117.580 1.00 51.74 C
ATOM 22 P C B2432 75.441 123.917 122.000 1.00 48.45 P
ATOM 23 OP1 C B2432 74.225 123.720 122.836 1.00 47.67 O
ATOM 24 OP2 C B2432 76.299 125.110 122.222 1.00 49.01 O
ATOM 25 O5' C B2432 76.348 122.610 122.103 1.00 48.28 O
TER
Atoms:
C2: (81.232,121.016,120.565)
OP1: (74.225,123.720,122.836)
OP2: (76.299,125.110,122.222)
C4: (81.578,123.322,120.579)
O5': (76.348,122.610,122.103)
C3': (77.881,120.186,122.999)
C1': (78.983,120.078,120.940)
O4': (77.652,120.514,120.710)
C5': (75.767,121.296,122.003)
P: (75.441,123.917,122.000)
O2: (81.645,119.843,120.456)
C4': (76.847,120.243,121.885)
C2': (79.016,119.442,122.325)
O2': (78.751,118.060,122.202)
N1: (79.880,121.235,120.851)
N3: (82.057,122.084,120.423)
N4: (82.419,124.343,120.414)
C6: (79.410,122.506,121.030)
C5: (80.215,123.566,120.906)
O3': (77.435,119.490,124.145)
OP1: (74.225,123.720,122.836)
OP2: (76.299,125.110,122.222)
C4: (81.578,123.322,120.579)
O5': (76.348,122.610,122.103)
C3': (77.881,120.186,122.999)
C1': (78.983,120.078,120.940)
O4': (77.652,120.514,120.710)
C5': (75.767,121.296,122.003)
P: (75.441,123.917,122.000)
O2: (81.645,119.843,120.456)
C4': (76.847,120.243,121.885)
C2': (79.016,119.442,122.325)
O2': (78.751,118.060,122.202)
N1: (79.880,121.235,120.851)
N3: (82.057,122.084,120.423)
N4: (82.419,124.343,120.414)
C6: (79.410,122.506,121.030)
C5: (80.215,123.566,120.906)
O3': (77.435,119.490,124.145)
C4: (80.130,120.649,117.317)
N3: (78.940,119.998,117.100)
OP1: (77.858,128.284,119.348)
OP2: (79.883,126.771,119.686)
C2: (77.681,120.545,117.101)
C1': (76.295,122.535,117.417)
C3': (75.888,123.675,119.439)
O5': (77.759,125.878,118.769)
O4': (76.409,123.935,117.200)
C5': (76.363,126.007,118.463)
P: (78.701,127.156,118.893)
C4': (75.741,124.643,118.279)
C2': (75.602,122.341,118.768)
O2': (74.223,122.117,118.561)
N1: (77.629,121.908,117.365)
O4: (81.188,120.006,117.287)
O2: (76.687,119.869,116.881)
C6: (78.784,122.621,117.580)
C5: (79.999,122.055,117.564)
O3': (74.957,123.934,120.472)
N3: (78.940,119.998,117.100)
OP1: (77.858,128.284,119.348)
OP2: (79.883,126.771,119.686)
C2: (77.681,120.545,117.101)
C1': (76.295,122.535,117.417)
C3': (75.888,123.675,119.439)
O5': (77.759,125.878,118.769)
O4': (76.409,123.935,117.200)
C5': (76.363,126.007,118.463)
P: (78.701,127.156,118.893)
C4': (75.741,124.643,118.279)
C2': (75.602,122.341,118.768)
O2': (74.223,122.117,118.561)
N1: (77.629,121.908,117.365)
O4: (81.188,120.006,117.287)
O2: (76.687,119.869,116.881)
C6: (78.784,122.621,117.580)
C5: (79.999,122.055,117.564)
O3': (74.957,123.934,120.472)
Image (generated by PyMOL):