Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0127:0126
Extra
PDB:
ATOM 1 O3' U A 126 94.206 145.890 6.998 1.00 90.93 O
ATOM 2 P C A 127 95.523 145.329 7.708 1.00 90.73 P
ATOM 3 OP1 C A 127 96.349 146.522 8.021 1.00 90.82 O
ATOM 4 OP2 C A 127 96.090 144.246 6.862 1.00 89.97 O
ATOM 5 O5' C A 127 95.006 144.711 9.085 1.00 90.70 O
ATOM 6 C5' C A 127 94.397 145.543 10.092 1.00 87.76 C
ATOM 7 C4' C A 127 94.828 145.101 11.474 1.00 86.50 C
ATOM 8 O4' C A 127 94.378 143.737 11.697 1.00 86.25 O
ATOM 9 C3' C A 127 96.329 145.104 11.762 1.00 85.73 C
ATOM 10 O3' C A 127 96.569 145.459 13.124 1.00 83.48 O
ATOM 11 C2' C A 127 96.716 143.646 11.537 1.00 86.03 C
ATOM 12 O2' C A 127 97.859 143.247 12.270 1.00 86.94 O
ATOM 13 C1' C A 127 95.478 142.923 12.055 1.00 86.49 C
ATOM 14 N1 C A 127 95.294 141.597 11.444 1.00 87.46 N
ATOM 15 C2 C A 127 95.744 140.451 12.134 1.00 87.42 C
ATOM 16 O2 C A 127 96.290 140.581 13.246 1.00 86.06 O
ATOM 17 N3 C A 127 95.570 139.235 11.568 1.00 88.36 N
ATOM 18 C4 C A 127 94.979 139.133 10.371 1.00 89.31 C
ATOM 19 N4 C A 127 94.821 137.910 9.848 1.00 90.47 N
ATOM 20 C5 C A 127 94.521 140.277 9.655 1.00 88.42 C
ATOM 21 C6 C A 127 94.695 141.473 10.220 1.00 87.49 C
ATOM 22 P G A 128 96.797 147.003 13.514 1.00 81.28 P
ATOM 23 OP1 G A 128 97.702 147.602 12.496 1.00 81.20 O
ATOM 24 OP2 G A 128 97.161 147.075 14.954 1.00 80.64 O
ATOM 25 O5' G A 128 95.351 147.638 13.310 1.00 77.47 O
TER
ATOM 1 O3' U B 125 91.604 139.844 6.671 1.00 74.99 O
ATOM 2 P U B 126 93.067 140.346 6.188 1.00 77.72 P
ATOM 3 OP1 U B 126 93.096 140.125 4.725 1.00 77.92 O
ATOM 4 OP2 U B 126 94.107 139.708 7.035 1.00 76.43 O
ATOM 5 O5' U B 126 93.066 141.927 6.464 1.00 81.71 O
ATOM 6 C5' U B 126 93.891 142.839 5.675 1.00 86.97 C
ATOM 7 C4' U B 126 93.230 144.208 5.540 1.00 91.04 C
ATOM 8 O4' U B 126 91.875 144.036 5.059 1.00 94.56 O
ATOM 9 C3' U B 126 93.076 145.048 6.803 1.00 92.83 C
ATOM 10 O3' U B 126 94.206 145.890 6.998 1.00 90.93 O
ATOM 11 C2' U B 126 91.907 145.973 6.466 1.00 96.11 C
ATOM 12 O2' U B 126 92.278 147.158 5.788 1.00 98.03 O
ATOM 13 C1' U B 126 91.060 145.100 5.533 1.00 98.56 C
ATOM 14 N1 U B 126 89.826 144.544 6.117 1.00103.22 N
ATOM 15 C2 U B 126 89.169 143.536 5.412 1.00105.96 C
ATOM 16 O2 U B 126 89.557 143.117 4.319 1.00106.43 O
ATOM 17 N3 U B 126 88.037 143.043 6.030 1.00107.56 N
ATOM 18 C4 U B 126 87.496 143.454 7.244 1.00107.46 C
ATOM 19 O4 U B 126 86.470 142.913 7.671 1.00107.44 O
ATOM 20 C5 U B 126 88.221 144.507 7.895 1.00106.45 C
ATOM 21 C6 U B 126 89.329 145.002 7.328 1.00104.51 C
ATOM 22 P C B 127 95.523 145.329 7.708 1.00 90.73 P
ATOM 23 OP1 C B 127 96.349 146.522 8.021 1.00 90.82 O
ATOM 24 OP2 C B 127 96.090 144.246 6.862 1.00 89.97 O
ATOM 25 O5' C B 127 95.006 144.711 9.085 1.00 90.70 O
TER
ATOM 2 P C A 127 95.523 145.329 7.708 1.00 90.73 P
ATOM 3 OP1 C A 127 96.349 146.522 8.021 1.00 90.82 O
ATOM 4 OP2 C A 127 96.090 144.246 6.862 1.00 89.97 O
ATOM 5 O5' C A 127 95.006 144.711 9.085 1.00 90.70 O
ATOM 6 C5' C A 127 94.397 145.543 10.092 1.00 87.76 C
ATOM 7 C4' C A 127 94.828 145.101 11.474 1.00 86.50 C
ATOM 8 O4' C A 127 94.378 143.737 11.697 1.00 86.25 O
ATOM 9 C3' C A 127 96.329 145.104 11.762 1.00 85.73 C
ATOM 10 O3' C A 127 96.569 145.459 13.124 1.00 83.48 O
ATOM 11 C2' C A 127 96.716 143.646 11.537 1.00 86.03 C
ATOM 12 O2' C A 127 97.859 143.247 12.270 1.00 86.94 O
ATOM 13 C1' C A 127 95.478 142.923 12.055 1.00 86.49 C
ATOM 14 N1 C A 127 95.294 141.597 11.444 1.00 87.46 N
ATOM 15 C2 C A 127 95.744 140.451 12.134 1.00 87.42 C
ATOM 16 O2 C A 127 96.290 140.581 13.246 1.00 86.06 O
ATOM 17 N3 C A 127 95.570 139.235 11.568 1.00 88.36 N
ATOM 18 C4 C A 127 94.979 139.133 10.371 1.00 89.31 C
ATOM 19 N4 C A 127 94.821 137.910 9.848 1.00 90.47 N
ATOM 20 C5 C A 127 94.521 140.277 9.655 1.00 88.42 C
ATOM 21 C6 C A 127 94.695 141.473 10.220 1.00 87.49 C
ATOM 22 P G A 128 96.797 147.003 13.514 1.00 81.28 P
ATOM 23 OP1 G A 128 97.702 147.602 12.496 1.00 81.20 O
ATOM 24 OP2 G A 128 97.161 147.075 14.954 1.00 80.64 O
ATOM 25 O5' G A 128 95.351 147.638 13.310 1.00 77.47 O
TER
ATOM 1 O3' U B 125 91.604 139.844 6.671 1.00 74.99 O
ATOM 2 P U B 126 93.067 140.346 6.188 1.00 77.72 P
ATOM 3 OP1 U B 126 93.096 140.125 4.725 1.00 77.92 O
ATOM 4 OP2 U B 126 94.107 139.708 7.035 1.00 76.43 O
ATOM 5 O5' U B 126 93.066 141.927 6.464 1.00 81.71 O
ATOM 6 C5' U B 126 93.891 142.839 5.675 1.00 86.97 C
ATOM 7 C4' U B 126 93.230 144.208 5.540 1.00 91.04 C
ATOM 8 O4' U B 126 91.875 144.036 5.059 1.00 94.56 O
ATOM 9 C3' U B 126 93.076 145.048 6.803 1.00 92.83 C
ATOM 10 O3' U B 126 94.206 145.890 6.998 1.00 90.93 O
ATOM 11 C2' U B 126 91.907 145.973 6.466 1.00 96.11 C
ATOM 12 O2' U B 126 92.278 147.158 5.788 1.00 98.03 O
ATOM 13 C1' U B 126 91.060 145.100 5.533 1.00 98.56 C
ATOM 14 N1 U B 126 89.826 144.544 6.117 1.00103.22 N
ATOM 15 C2 U B 126 89.169 143.536 5.412 1.00105.96 C
ATOM 16 O2 U B 126 89.557 143.117 4.319 1.00106.43 O
ATOM 17 N3 U B 126 88.037 143.043 6.030 1.00107.56 N
ATOM 18 C4 U B 126 87.496 143.454 7.244 1.00107.46 C
ATOM 19 O4 U B 126 86.470 142.913 7.671 1.00107.44 O
ATOM 20 C5 U B 126 88.221 144.507 7.895 1.00106.45 C
ATOM 21 C6 U B 126 89.329 145.002 7.328 1.00104.51 C
ATOM 22 P C B 127 95.523 145.329 7.708 1.00 90.73 P
ATOM 23 OP1 C B 127 96.349 146.522 8.021 1.00 90.82 O
ATOM 24 OP2 C B 127 96.090 144.246 6.862 1.00 89.97 O
ATOM 25 O5' C B 127 95.006 144.711 9.085 1.00 90.70 O
TER
Atoms:
C2: (95.744,140.451,12.134)
OP1: (96.349,146.522,8.021)
OP2: (96.090,144.246,6.862)
C4: (94.979,139.133,10.371)
O5': (95.006,144.711,9.085)
C3': (96.329,145.104,11.762)
C1': (95.478,142.923,12.055)
O4': (94.378,143.737,11.697)
C5': (94.397,145.543,10.092)
P: (95.523,145.329,7.708)
O2: (96.290,140.581,13.246)
C4': (94.828,145.101,11.474)
C2': (96.716,143.646,11.537)
O2': (97.859,143.247,12.270)
N1: (95.294,141.597,11.444)
N3: (95.570,139.235,11.568)
N4: (94.821,137.910,9.848)
C6: (94.695,141.473,10.220)
C5: (94.521,140.277,9.655)
O3': (96.569,145.459,13.124)
OP1: (96.349,146.522,8.021)
OP2: (96.090,144.246,6.862)
C4: (94.979,139.133,10.371)
O5': (95.006,144.711,9.085)
C3': (96.329,145.104,11.762)
C1': (95.478,142.923,12.055)
O4': (94.378,143.737,11.697)
C5': (94.397,145.543,10.092)
P: (95.523,145.329,7.708)
O2: (96.290,140.581,13.246)
C4': (94.828,145.101,11.474)
C2': (96.716,143.646,11.537)
O2': (97.859,143.247,12.270)
N1: (95.294,141.597,11.444)
N3: (95.570,139.235,11.568)
N4: (94.821,137.910,9.848)
C6: (94.695,141.473,10.220)
C5: (94.521,140.277,9.655)
O3': (96.569,145.459,13.124)
C4: (87.496,143.454,7.244)
N3: (88.037,143.043,6.030)
OP1: (93.096,140.125,4.725)
OP2: (94.107,139.708,7.035)
C2: (89.169,143.536,5.412)
C1': (91.060,145.100,5.533)
C3': (93.076,145.048,6.803)
O5': (93.066,141.927,6.464)
O4': (91.875,144.036,5.059)
C5': (93.891,142.839,5.675)
P: (93.067,140.346,6.188)
C4': (93.230,144.208,5.540)
C2': (91.907,145.973,6.466)
O2': (92.278,147.158,5.788)
N1: (89.826,144.544,6.117)
O4: (86.470,142.913,7.671)
O2: (89.557,143.117,4.319)
C6: (89.329,145.002,7.328)
C5: (88.221,144.507,7.895)
O3': (94.206,145.890,6.998)
N3: (88.037,143.043,6.030)
OP1: (93.096,140.125,4.725)
OP2: (94.107,139.708,7.035)
C2: (89.169,143.536,5.412)
C1': (91.060,145.100,5.533)
C3': (93.076,145.048,6.803)
O5': (93.066,141.927,6.464)
O4': (91.875,144.036,5.059)
C5': (93.891,142.839,5.675)
P: (93.067,140.346,6.188)
C4': (93.230,144.208,5.540)
C2': (91.907,145.973,6.466)
O2': (92.278,147.158,5.788)
N1: (89.826,144.544,6.117)
O4: (86.470,142.913,7.671)
O2: (89.557,143.117,4.319)
C6: (89.329,145.002,7.328)
C5: (88.221,144.507,7.895)
O3': (94.206,145.890,6.998)
Image (generated by PyMOL):