Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU3:D59:D58
Extra
PDB:
ATOM 1 O3' U A 58 17.640 61.492 -59.256 1.00134.45 O
ATOM 2 P C A 59 18.087 63.031 -59.401 1.00124.42 P
ATOM 3 OP1 C A 59 19.252 63.023 -60.325 1.00122.23 O
ATOM 4 OP2 C A 59 18.226 63.643 -58.053 1.00117.16 O
ATOM 5 O5' C A 59 16.866 63.728 -60.149 1.00131.28 O
ATOM 6 C5' C A 59 16.907 63.977 -61.553 1.00129.38 C
ATOM 7 C4' C A 59 16.032 65.160 -61.893 1.00129.16 C
ATOM 8 O4' C A 59 14.660 64.846 -61.534 1.00126.91 O
ATOM 9 C3' C A 59 16.327 66.431 -61.109 1.00133.21 C
ATOM 10 O3' C A 59 17.387 67.186 -61.685 1.00140.21 O
ATOM 11 C2' C A 59 15.002 67.172 -61.196 1.00125.76 C
ATOM 12 O2' C A 59 14.825 67.825 -62.437 1.00124.98 O
ATOM 13 C1' C A 59 14.010 66.016 -61.061 1.00120.14 C
ATOM 14 N1 C A 59 13.588 65.793 -59.667 1.00108.29 N
ATOM 15 C2 C A 59 12.574 66.597 -59.146 1.00109.94 C
ATOM 16 O2 C A 59 12.057 67.457 -59.881 1.00111.77 O
ATOM 17 N3 C A 59 12.177 66.418 -57.860 1.00100.57 N
ATOM 18 C4 C A 59 12.751 65.474 -57.111 1.00 94.46 C
ATOM 19 N4 C A 59 12.321 65.327 -55.854 1.00 90.71 N
ATOM 20 C5 C A 59 13.788 64.636 -57.620 1.00 88.68 C
ATOM 21 C6 C A 59 14.172 64.829 -58.891 1.00 99.24 C
ATOM 22 P C A 60 18.291 68.128 -60.746 1.00143.74 P
ATOM 23 OP1 C A 60 19.406 68.627 -61.590 1.00140.00 O
ATOM 24 OP2 C A 60 18.589 67.400 -59.482 1.00134.51 O
ATOM 25 O5' C A 60 17.342 69.361 -60.395 1.00146.34 O
TER
ATOM 1 O3' A B 57 15.192 61.697 -52.735 1.00117.61 O
ATOM 2 P U B 58 15.117 62.591 -54.074 1.00120.10 P
ATOM 3 OP1 U B 58 15.222 64.013 -53.649 1.00115.51 O
ATOM 4 OP2 U B 58 13.957 62.162 -54.893 1.00121.24 O
ATOM 5 O5' U B 58 16.445 62.204 -54.868 1.00124.40 O
ATOM 6 C5' U B 58 16.551 62.439 -56.268 1.00127.77 C
ATOM 7 C4' U B 58 16.873 61.152 -56.988 1.00127.81 C
ATOM 8 O4' U B 58 16.123 60.082 -56.380 1.00130.04 O
ATOM 9 C3' U B 58 16.502 61.135 -58.466 1.00132.59 C
ATOM 10 O3' U B 58 17.640 61.492 -59.256 1.00134.45 O
ATOM 11 C2' U B 58 16.176 59.662 -58.745 1.00133.69 C
ATOM 12 O2' U B 58 17.289 58.953 -59.255 1.00138.07 O
ATOM 13 C1' U B 58 15.821 59.114 -57.357 1.00131.09 C
ATOM 14 N1 U B 58 14.461 58.610 -57.117 1.00123.63 N
ATOM 15 C2 U B 58 14.077 57.443 -57.756 1.00124.34 C
ATOM 16 O2 U B 58 14.784 56.864 -58.559 1.00120.59 O
ATOM 17 N3 U B 58 12.830 56.978 -57.414 1.00125.00 N
ATOM 18 C4 U B 58 11.943 57.553 -56.527 1.00121.34 C
ATOM 19 O4 U B 58 10.890 56.969 -56.259 1.00115.74 O
ATOM 20 C5 U B 58 12.399 58.777 -55.939 1.00121.41 C
ATOM 21 C6 U B 58 13.610 59.253 -56.250 1.00117.94 C
ATOM 22 P C B 59 18.087 63.031 -59.401 1.00124.42 P
ATOM 23 OP1 C B 59 19.252 63.023 -60.325 1.00122.23 O
ATOM 24 OP2 C B 59 18.226 63.643 -58.053 1.00117.16 O
ATOM 25 O5' C B 59 16.866 63.728 -60.149 1.00131.28 O
TER
ATOM 2 P C A 59 18.087 63.031 -59.401 1.00124.42 P
ATOM 3 OP1 C A 59 19.252 63.023 -60.325 1.00122.23 O
ATOM 4 OP2 C A 59 18.226 63.643 -58.053 1.00117.16 O
ATOM 5 O5' C A 59 16.866 63.728 -60.149 1.00131.28 O
ATOM 6 C5' C A 59 16.907 63.977 -61.553 1.00129.38 C
ATOM 7 C4' C A 59 16.032 65.160 -61.893 1.00129.16 C
ATOM 8 O4' C A 59 14.660 64.846 -61.534 1.00126.91 O
ATOM 9 C3' C A 59 16.327 66.431 -61.109 1.00133.21 C
ATOM 10 O3' C A 59 17.387 67.186 -61.685 1.00140.21 O
ATOM 11 C2' C A 59 15.002 67.172 -61.196 1.00125.76 C
ATOM 12 O2' C A 59 14.825 67.825 -62.437 1.00124.98 O
ATOM 13 C1' C A 59 14.010 66.016 -61.061 1.00120.14 C
ATOM 14 N1 C A 59 13.588 65.793 -59.667 1.00108.29 N
ATOM 15 C2 C A 59 12.574 66.597 -59.146 1.00109.94 C
ATOM 16 O2 C A 59 12.057 67.457 -59.881 1.00111.77 O
ATOM 17 N3 C A 59 12.177 66.418 -57.860 1.00100.57 N
ATOM 18 C4 C A 59 12.751 65.474 -57.111 1.00 94.46 C
ATOM 19 N4 C A 59 12.321 65.327 -55.854 1.00 90.71 N
ATOM 20 C5 C A 59 13.788 64.636 -57.620 1.00 88.68 C
ATOM 21 C6 C A 59 14.172 64.829 -58.891 1.00 99.24 C
ATOM 22 P C A 60 18.291 68.128 -60.746 1.00143.74 P
ATOM 23 OP1 C A 60 19.406 68.627 -61.590 1.00140.00 O
ATOM 24 OP2 C A 60 18.589 67.400 -59.482 1.00134.51 O
ATOM 25 O5' C A 60 17.342 69.361 -60.395 1.00146.34 O
TER
ATOM 1 O3' A B 57 15.192 61.697 -52.735 1.00117.61 O
ATOM 2 P U B 58 15.117 62.591 -54.074 1.00120.10 P
ATOM 3 OP1 U B 58 15.222 64.013 -53.649 1.00115.51 O
ATOM 4 OP2 U B 58 13.957 62.162 -54.893 1.00121.24 O
ATOM 5 O5' U B 58 16.445 62.204 -54.868 1.00124.40 O
ATOM 6 C5' U B 58 16.551 62.439 -56.268 1.00127.77 C
ATOM 7 C4' U B 58 16.873 61.152 -56.988 1.00127.81 C
ATOM 8 O4' U B 58 16.123 60.082 -56.380 1.00130.04 O
ATOM 9 C3' U B 58 16.502 61.135 -58.466 1.00132.59 C
ATOM 10 O3' U B 58 17.640 61.492 -59.256 1.00134.45 O
ATOM 11 C2' U B 58 16.176 59.662 -58.745 1.00133.69 C
ATOM 12 O2' U B 58 17.289 58.953 -59.255 1.00138.07 O
ATOM 13 C1' U B 58 15.821 59.114 -57.357 1.00131.09 C
ATOM 14 N1 U B 58 14.461 58.610 -57.117 1.00123.63 N
ATOM 15 C2 U B 58 14.077 57.443 -57.756 1.00124.34 C
ATOM 16 O2 U B 58 14.784 56.864 -58.559 1.00120.59 O
ATOM 17 N3 U B 58 12.830 56.978 -57.414 1.00125.00 N
ATOM 18 C4 U B 58 11.943 57.553 -56.527 1.00121.34 C
ATOM 19 O4 U B 58 10.890 56.969 -56.259 1.00115.74 O
ATOM 20 C5 U B 58 12.399 58.777 -55.939 1.00121.41 C
ATOM 21 C6 U B 58 13.610 59.253 -56.250 1.00117.94 C
ATOM 22 P C B 59 18.087 63.031 -59.401 1.00124.42 P
ATOM 23 OP1 C B 59 19.252 63.023 -60.325 1.00122.23 O
ATOM 24 OP2 C B 59 18.226 63.643 -58.053 1.00117.16 O
ATOM 25 O5' C B 59 16.866 63.728 -60.149 1.00131.28 O
TER
Atoms:
C2: (12.574,66.597,-59.146)
OP1: (19.252,63.023,-60.325)
OP2: (18.226,63.643,-58.053)
C4: (12.751,65.474,-57.111)
O5': (16.866,63.728,-60.149)
C3': (16.327,66.431,-61.109)
C1': (14.010,66.016,-61.061)
O4': (14.660,64.846,-61.534)
C5': (16.907,63.977,-61.553)
P: (18.087,63.031,-59.401)
O2: (12.057,67.457,-59.881)
C4': (16.032,65.160,-61.893)
C2': (15.002,67.172,-61.196)
O2': (14.825,67.825,-62.437)
N1: (13.588,65.793,-59.667)
N3: (12.177,66.418,-57.860)
N4: (12.321,65.327,-55.854)
C6: (14.172,64.829,-58.891)
C5: (13.788,64.636,-57.620)
O3': (17.387,67.186,-61.685)
OP1: (19.252,63.023,-60.325)
OP2: (18.226,63.643,-58.053)
C4: (12.751,65.474,-57.111)
O5': (16.866,63.728,-60.149)
C3': (16.327,66.431,-61.109)
C1': (14.010,66.016,-61.061)
O4': (14.660,64.846,-61.534)
C5': (16.907,63.977,-61.553)
P: (18.087,63.031,-59.401)
O2: (12.057,67.457,-59.881)
C4': (16.032,65.160,-61.893)
C2': (15.002,67.172,-61.196)
O2': (14.825,67.825,-62.437)
N1: (13.588,65.793,-59.667)
N3: (12.177,66.418,-57.860)
N4: (12.321,65.327,-55.854)
C6: (14.172,64.829,-58.891)
C5: (13.788,64.636,-57.620)
O3': (17.387,67.186,-61.685)
C4: (11.943,57.553,-56.527)
N3: (12.830,56.978,-57.414)
OP1: (15.222,64.013,-53.649)
OP2: (13.957,62.162,-54.893)
C2: (14.077,57.443,-57.756)
C1': (15.821,59.114,-57.357)
C3': (16.502,61.135,-58.466)
O5': (16.445,62.204,-54.868)
O4': (16.123,60.082,-56.380)
C5': (16.551,62.439,-56.268)
P: (15.117,62.591,-54.074)
C4': (16.873,61.152,-56.988)
C2': (16.176,59.662,-58.745)
O2': (17.289,58.953,-59.255)
N1: (14.461,58.610,-57.117)
O4: (10.890,56.969,-56.259)
O2: (14.784,56.864,-58.559)
C6: (13.610,59.253,-56.250)
C5: (12.399,58.777,-55.939)
O3': (17.640,61.492,-59.256)
N3: (12.830,56.978,-57.414)
OP1: (15.222,64.013,-53.649)
OP2: (13.957,62.162,-54.893)
C2: (14.077,57.443,-57.756)
C1': (15.821,59.114,-57.357)
C3': (16.502,61.135,-58.466)
O5': (16.445,62.204,-54.868)
O4': (16.123,60.082,-56.380)
C5': (16.551,62.439,-56.268)
P: (15.117,62.591,-54.074)
C4': (16.873,61.152,-56.988)
C2': (16.176,59.662,-58.745)
O2': (17.289,58.953,-59.255)
N1: (14.461,58.610,-57.117)
O4: (10.890,56.969,-56.259)
O2: (14.784,56.864,-58.559)
C6: (13.610,59.253,-56.250)
C5: (12.399,58.777,-55.939)
O3': (17.640,61.492,-59.256)
Image (generated by PyMOL):