Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU4:C59:C58
Extra
PDB:
ATOM 1 O3' U A 58 17.508 61.029 -58.439 1.00162.79 O
ATOM 2 P C A 59 18.107 62.532 -58.383 1.00157.68 P
ATOM 3 OP1 C A 59 19.324 62.535 -59.240 1.00139.30 O
ATOM 4 OP2 C A 59 18.201 63.039 -56.989 1.00135.35 O
ATOM 5 O5' C A 59 17.007 63.386 -59.147 1.00169.35 O
ATOM 6 C5' C A 59 16.978 63.432 -60.569 1.00167.89 C
ATOM 7 C4' C A 59 16.117 64.579 -61.012 1.00164.25 C
ATOM 8 O4' C A 59 14.732 64.269 -60.688 1.00162.40 O
ATOM 9 C3' C A 59 16.385 65.862 -60.240 1.00170.10 C
ATOM 10 O3' C A 59 17.506 66.597 -60.716 1.00177.19 O
ATOM 11 C2' C A 59 15.064 66.595 -60.391 1.00162.10 C
ATOM 12 O2' C A 59 14.905 67.178 -61.674 1.00156.85 O
ATOM 13 C1' C A 59 14.084 65.437 -60.196 1.00151.85 C
ATOM 14 N1 C A 59 13.742 65.223 -58.774 1.00130.61 N
ATOM 15 C2 C A 59 12.766 66.044 -58.190 1.00125.42 C
ATOM 16 O2 C A 59 12.239 66.937 -58.893 1.00114.73 O
ATOM 17 N3 C A 59 12.421 65.843 -56.883 1.00 89.78 N
ATOM 18 C4 C A 59 13.007 64.866 -56.182 1.00 98.99 C
ATOM 19 N4 C A 59 12.613 64.673 -54.922 1.00 94.64 N
ATOM 20 C5 C A 59 14.018 64.032 -56.749 1.00105.76 C
ATOM 21 C6 C A 59 14.351 64.243 -58.034 1.00120.79 C
ATOM 22 P C A 60 18.386 67.457 -59.675 1.00179.66 P
ATOM 23 OP1 C A 60 19.599 67.884 -60.414 1.00178.36 O
ATOM 24 OP2 C A 60 18.526 66.704 -58.390 1.00161.90 O
ATOM 25 O5' C A 60 17.497 68.751 -59.388 1.00179.43 O
TER
ATOM 1 O3' A B 57 15.111 61.031 -51.846 1.00110.83 O
ATOM 2 P U B 58 15.033 61.901 -53.211 1.00130.75 P
ATOM 3 OP1 U B 58 15.196 63.343 -52.874 1.00113.87 O
ATOM 4 OP2 U B 58 13.868 61.479 -54.021 1.00137.91 O
ATOM 5 O5' U B 58 16.321 61.454 -54.031 1.00133.73 O
ATOM 6 C5' U B 58 16.449 61.789 -55.404 1.00135.64 C
ATOM 7 C4' U B 58 16.745 60.554 -56.212 1.00141.08 C
ATOM 8 O4' U B 58 16.021 59.439 -55.661 1.00142.19 O
ATOM 9 C3' U B 58 16.345 60.667 -57.675 1.00149.39 C
ATOM 10 O3' U B 58 17.508 61.029 -58.439 1.00162.79 O
ATOM 11 C2' U B 58 15.899 59.243 -58.058 1.00152.05 C
ATOM 12 O2' U B 58 16.876 58.512 -58.777 1.00158.21 O
ATOM 13 C1' U B 58 15.650 58.566 -56.699 1.00145.20 C
ATOM 14 N1 U B 58 14.317 58.030 -56.390 1.00142.59 N
ATOM 15 C2 U B 58 13.989 56.771 -56.870 1.00145.61 C
ATOM 16 O2 U B 58 14.724 56.124 -57.594 1.00141.07 O
ATOM 17 N3 U B 58 12.765 56.294 -56.460 1.00144.86 N
ATOM 18 C4 U B 58 11.852 56.936 -55.646 1.00143.11 C
ATOM 19 O4 U B 58 10.831 56.341 -55.284 1.00138.39 O
ATOM 20 C5 U B 58 12.250 58.245 -55.230 1.00145.35 C
ATOM 21 C6 U B 58 13.436 58.736 -55.610 1.00141.81 C
ATOM 22 P C B 59 18.107 62.532 -58.383 1.00157.68 P
ATOM 23 OP1 C B 59 19.324 62.535 -59.240 1.00139.30 O
ATOM 24 OP2 C B 59 18.201 63.039 -56.989 1.00135.35 O
ATOM 25 O5' C B 59 17.007 63.386 -59.147 1.00169.35 O
TER
ATOM 2 P C A 59 18.107 62.532 -58.383 1.00157.68 P
ATOM 3 OP1 C A 59 19.324 62.535 -59.240 1.00139.30 O
ATOM 4 OP2 C A 59 18.201 63.039 -56.989 1.00135.35 O
ATOM 5 O5' C A 59 17.007 63.386 -59.147 1.00169.35 O
ATOM 6 C5' C A 59 16.978 63.432 -60.569 1.00167.89 C
ATOM 7 C4' C A 59 16.117 64.579 -61.012 1.00164.25 C
ATOM 8 O4' C A 59 14.732 64.269 -60.688 1.00162.40 O
ATOM 9 C3' C A 59 16.385 65.862 -60.240 1.00170.10 C
ATOM 10 O3' C A 59 17.506 66.597 -60.716 1.00177.19 O
ATOM 11 C2' C A 59 15.064 66.595 -60.391 1.00162.10 C
ATOM 12 O2' C A 59 14.905 67.178 -61.674 1.00156.85 O
ATOM 13 C1' C A 59 14.084 65.437 -60.196 1.00151.85 C
ATOM 14 N1 C A 59 13.742 65.223 -58.774 1.00130.61 N
ATOM 15 C2 C A 59 12.766 66.044 -58.190 1.00125.42 C
ATOM 16 O2 C A 59 12.239 66.937 -58.893 1.00114.73 O
ATOM 17 N3 C A 59 12.421 65.843 -56.883 1.00 89.78 N
ATOM 18 C4 C A 59 13.007 64.866 -56.182 1.00 98.99 C
ATOM 19 N4 C A 59 12.613 64.673 -54.922 1.00 94.64 N
ATOM 20 C5 C A 59 14.018 64.032 -56.749 1.00105.76 C
ATOM 21 C6 C A 59 14.351 64.243 -58.034 1.00120.79 C
ATOM 22 P C A 60 18.386 67.457 -59.675 1.00179.66 P
ATOM 23 OP1 C A 60 19.599 67.884 -60.414 1.00178.36 O
ATOM 24 OP2 C A 60 18.526 66.704 -58.390 1.00161.90 O
ATOM 25 O5' C A 60 17.497 68.751 -59.388 1.00179.43 O
TER
ATOM 1 O3' A B 57 15.111 61.031 -51.846 1.00110.83 O
ATOM 2 P U B 58 15.033 61.901 -53.211 1.00130.75 P
ATOM 3 OP1 U B 58 15.196 63.343 -52.874 1.00113.87 O
ATOM 4 OP2 U B 58 13.868 61.479 -54.021 1.00137.91 O
ATOM 5 O5' U B 58 16.321 61.454 -54.031 1.00133.73 O
ATOM 6 C5' U B 58 16.449 61.789 -55.404 1.00135.64 C
ATOM 7 C4' U B 58 16.745 60.554 -56.212 1.00141.08 C
ATOM 8 O4' U B 58 16.021 59.439 -55.661 1.00142.19 O
ATOM 9 C3' U B 58 16.345 60.667 -57.675 1.00149.39 C
ATOM 10 O3' U B 58 17.508 61.029 -58.439 1.00162.79 O
ATOM 11 C2' U B 58 15.899 59.243 -58.058 1.00152.05 C
ATOM 12 O2' U B 58 16.876 58.512 -58.777 1.00158.21 O
ATOM 13 C1' U B 58 15.650 58.566 -56.699 1.00145.20 C
ATOM 14 N1 U B 58 14.317 58.030 -56.390 1.00142.59 N
ATOM 15 C2 U B 58 13.989 56.771 -56.870 1.00145.61 C
ATOM 16 O2 U B 58 14.724 56.124 -57.594 1.00141.07 O
ATOM 17 N3 U B 58 12.765 56.294 -56.460 1.00144.86 N
ATOM 18 C4 U B 58 11.852 56.936 -55.646 1.00143.11 C
ATOM 19 O4 U B 58 10.831 56.341 -55.284 1.00138.39 O
ATOM 20 C5 U B 58 12.250 58.245 -55.230 1.00145.35 C
ATOM 21 C6 U B 58 13.436 58.736 -55.610 1.00141.81 C
ATOM 22 P C B 59 18.107 62.532 -58.383 1.00157.68 P
ATOM 23 OP1 C B 59 19.324 62.535 -59.240 1.00139.30 O
ATOM 24 OP2 C B 59 18.201 63.039 -56.989 1.00135.35 O
ATOM 25 O5' C B 59 17.007 63.386 -59.147 1.00169.35 O
TER
Atoms:
C2: (12.766,66.044,-58.190)
OP1: (19.324,62.535,-59.240)
OP2: (18.201,63.039,-56.989)
C4: (13.007,64.866,-56.182)
O5': (17.007,63.386,-59.147)
C3': (16.385,65.862,-60.240)
C1': (14.084,65.437,-60.196)
O4': (14.732,64.269,-60.688)
C5': (16.978,63.432,-60.569)
P: (18.107,62.532,-58.383)
O2: (12.239,66.937,-58.893)
C4': (16.117,64.579,-61.012)
C2': (15.064,66.595,-60.391)
O2': (14.905,67.178,-61.674)
N1: (13.742,65.223,-58.774)
N3: (12.421,65.843,-56.883)
N4: (12.613,64.673,-54.922)
C6: (14.351,64.243,-58.034)
C5: (14.018,64.032,-56.749)
O3': (17.506,66.597,-60.716)
OP1: (19.324,62.535,-59.240)
OP2: (18.201,63.039,-56.989)
C4: (13.007,64.866,-56.182)
O5': (17.007,63.386,-59.147)
C3': (16.385,65.862,-60.240)
C1': (14.084,65.437,-60.196)
O4': (14.732,64.269,-60.688)
C5': (16.978,63.432,-60.569)
P: (18.107,62.532,-58.383)
O2: (12.239,66.937,-58.893)
C4': (16.117,64.579,-61.012)
C2': (15.064,66.595,-60.391)
O2': (14.905,67.178,-61.674)
N1: (13.742,65.223,-58.774)
N3: (12.421,65.843,-56.883)
N4: (12.613,64.673,-54.922)
C6: (14.351,64.243,-58.034)
C5: (14.018,64.032,-56.749)
O3': (17.506,66.597,-60.716)
C4: (11.852,56.936,-55.646)
N3: (12.765,56.294,-56.460)
OP1: (15.196,63.343,-52.874)
OP2: (13.868,61.479,-54.021)
C2: (13.989,56.771,-56.870)
C1': (15.650,58.566,-56.699)
C3': (16.345,60.667,-57.675)
O5': (16.321,61.454,-54.031)
O4': (16.021,59.439,-55.661)
C5': (16.449,61.789,-55.404)
P: (15.033,61.901,-53.211)
C4': (16.745,60.554,-56.212)
C2': (15.899,59.243,-58.058)
O2': (16.876,58.512,-58.777)
N1: (14.317,58.030,-56.390)
O4: (10.831,56.341,-55.284)
O2: (14.724,56.124,-57.594)
C6: (13.436,58.736,-55.610)
C5: (12.250,58.245,-55.230)
O3': (17.508,61.029,-58.439)
N3: (12.765,56.294,-56.460)
OP1: (15.196,63.343,-52.874)
OP2: (13.868,61.479,-54.021)
C2: (13.989,56.771,-56.870)
C1': (15.650,58.566,-56.699)
C3': (16.345,60.667,-57.675)
O5': (16.321,61.454,-54.031)
O4': (16.021,59.439,-55.661)
C5': (16.449,61.789,-55.404)
P: (15.033,61.901,-53.211)
C4': (16.745,60.554,-56.212)
C2': (15.899,59.243,-58.058)
O2': (16.876,58.512,-58.777)
N1: (14.317,58.030,-56.390)
O4: (10.831,56.341,-55.284)
O2: (14.724,56.124,-57.594)
C6: (13.436,58.736,-55.610)
C5: (12.250,58.245,-55.230)
O3': (17.508,61.029,-58.439)
Image (generated by PyMOL):