Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12165:11389
Extra
PDB:
ATOM 1 O3' A A2164 47.820 19.823 77.528 1.00 37.76 O
ATOM 2 P A A2165 48.401 18.689 76.578 1.00 40.29 P
ATOM 3 OP1 A A2165 48.651 17.483 77.421 1.00 40.16 O
ATOM 4 OP2 A A2165 49.540 19.299 75.823 1.00 40.37 O
ATOM 5 O5' A A2165 47.203 18.404 75.567 1.00 40.13 O
ATOM 6 C5' A A2165 45.886 18.130 76.004 1.00 40.10 C
ATOM 7 C4' A A2165 44.959 18.210 74.845 1.00 40.02 C
ATOM 8 O4' A A2165 44.940 19.563 74.366 1.00 40.22 O
ATOM 9 C3' A A2165 45.372 17.389 73.628 1.00 39.80 C
ATOM 10 O3' A A2165 44.931 16.052 73.678 1.00 39.59 O
ATOM 11 C2' A A2165 44.794 18.144 72.469 1.00 39.86 C
ATOM 12 O2' A A2165 43.464 17.774 72.283 1.00 39.78 O
ATOM 13 C1' A A2165 44.853 19.581 72.966 1.00 40.14 C
ATOM 14 N9 A A2165 46.036 20.268 72.446 1.00 40.24 N
ATOM 15 C8 A A2165 47.195 20.524 73.115 1.00 40.34 C
ATOM 16 N7 A A2165 48.054 21.135 72.347 1.00 40.42 N
ATOM 17 C5 A A2165 47.419 21.272 71.120 1.00 40.37 C
ATOM 18 C6 A A2165 47.797 21.853 69.916 1.00 40.43 C
ATOM 19 N6 A A2165 48.978 22.427 69.703 1.00 40.56 N
ATOM 20 N1 A A2165 46.915 21.823 68.906 1.00 40.38 N
ATOM 21 C2 A A2165 45.734 21.278 69.119 1.00 40.27 C
ATOM 22 N3 A A2165 45.275 20.699 70.213 1.00 40.20 N
ATOM 23 C4 A A2165 46.181 20.727 71.171 1.00 40.26 C
ATOM 24 P C A2166 45.957 14.878 73.379 1.00 37.25 P
ATOM 25 OP1 C A2166 45.219 13.618 73.543 1.00 37.07 O
ATOM 26 OP2 C A2166 47.169 15.116 74.223 1.00 37.36 O
ATOM 27 O5' C A2166 46.321 15.113 71.856 1.00 37.21 O
TER
ATOM 1 O3' G B1388 56.814 25.864 66.335 1.00 42.71 O
ATOM 2 P U B1389 56.040 27.138 66.895 1.00 39.10 P
ATOM 3 OP1 U B1389 55.867 28.091 65.792 1.00 39.28 O
ATOM 4 OP2 U B1389 56.720 27.559 68.128 1.00 39.27 O
ATOM 5 O5' U B1389 54.649 26.527 67.254 1.00 38.91 O
ATOM 6 C5' U B1389 53.715 26.174 66.270 1.00 38.77 C
ATOM 7 C4' U B1389 52.588 25.489 66.928 1.00 38.60 C
ATOM 8 O4' U B1389 53.142 24.488 67.808 1.00 38.44 O
ATOM 9 C3' U B1389 51.756 26.325 67.882 1.00 38.78 C
ATOM 10 O3' U B1389 50.764 27.087 67.236 1.00 38.90 O
ATOM 11 C2' U B1389 51.136 25.222 68.731 1.00 38.56 C
ATOM 12 O2' U B1389 50.178 24.491 67.981 1.00 38.36 O
ATOM 13 C1' U B1389 52.297 24.311 68.912 1.00 38.42 C
ATOM 14 N1 U B1389 53.017 24.608 70.107 1.00 38.56 N
ATOM 15 C2 U B1389 52.483 23.996 71.194 1.00 38.47 C
ATOM 16 O2 U B1389 51.505 23.284 71.114 1.00 38.28 O
ATOM 17 N3 U B1389 53.159 24.242 72.330 1.00 38.61 N
ATOM 18 C4 U B1389 54.281 24.996 72.449 1.00 38.82 C
ATOM 19 O4 U B1389 54.789 25.156 73.547 1.00 38.96 O
ATOM 20 C5 U B1389 54.746 25.601 71.266 1.00 38.90 C
ATOM 21 C6 U B1389 54.108 25.392 70.141 1.00 38.77 C
ATOM 22 P A B1390 50.959 28.590 66.720 1.00 38.16 P
ATOM 23 OP1 A B1390 49.618 29.114 66.483 1.00 38.24 O
ATOM 24 OP2 A B1390 51.904 28.552 65.579 1.00 38.14 O
ATOM 25 O5' A B1390 51.600 29.354 67.904 1.00 38.39 O
TER
ATOM 2 P A A2165 48.401 18.689 76.578 1.00 40.29 P
ATOM 3 OP1 A A2165 48.651 17.483 77.421 1.00 40.16 O
ATOM 4 OP2 A A2165 49.540 19.299 75.823 1.00 40.37 O
ATOM 5 O5' A A2165 47.203 18.404 75.567 1.00 40.13 O
ATOM 6 C5' A A2165 45.886 18.130 76.004 1.00 40.10 C
ATOM 7 C4' A A2165 44.959 18.210 74.845 1.00 40.02 C
ATOM 8 O4' A A2165 44.940 19.563 74.366 1.00 40.22 O
ATOM 9 C3' A A2165 45.372 17.389 73.628 1.00 39.80 C
ATOM 10 O3' A A2165 44.931 16.052 73.678 1.00 39.59 O
ATOM 11 C2' A A2165 44.794 18.144 72.469 1.00 39.86 C
ATOM 12 O2' A A2165 43.464 17.774 72.283 1.00 39.78 O
ATOM 13 C1' A A2165 44.853 19.581 72.966 1.00 40.14 C
ATOM 14 N9 A A2165 46.036 20.268 72.446 1.00 40.24 N
ATOM 15 C8 A A2165 47.195 20.524 73.115 1.00 40.34 C
ATOM 16 N7 A A2165 48.054 21.135 72.347 1.00 40.42 N
ATOM 17 C5 A A2165 47.419 21.272 71.120 1.00 40.37 C
ATOM 18 C6 A A2165 47.797 21.853 69.916 1.00 40.43 C
ATOM 19 N6 A A2165 48.978 22.427 69.703 1.00 40.56 N
ATOM 20 N1 A A2165 46.915 21.823 68.906 1.00 40.38 N
ATOM 21 C2 A A2165 45.734 21.278 69.119 1.00 40.27 C
ATOM 22 N3 A A2165 45.275 20.699 70.213 1.00 40.20 N
ATOM 23 C4 A A2165 46.181 20.727 71.171 1.00 40.26 C
ATOM 24 P C A2166 45.957 14.878 73.379 1.00 37.25 P
ATOM 25 OP1 C A2166 45.219 13.618 73.543 1.00 37.07 O
ATOM 26 OP2 C A2166 47.169 15.116 74.223 1.00 37.36 O
ATOM 27 O5' C A2166 46.321 15.113 71.856 1.00 37.21 O
TER
ATOM 1 O3' G B1388 56.814 25.864 66.335 1.00 42.71 O
ATOM 2 P U B1389 56.040 27.138 66.895 1.00 39.10 P
ATOM 3 OP1 U B1389 55.867 28.091 65.792 1.00 39.28 O
ATOM 4 OP2 U B1389 56.720 27.559 68.128 1.00 39.27 O
ATOM 5 O5' U B1389 54.649 26.527 67.254 1.00 38.91 O
ATOM 6 C5' U B1389 53.715 26.174 66.270 1.00 38.77 C
ATOM 7 C4' U B1389 52.588 25.489 66.928 1.00 38.60 C
ATOM 8 O4' U B1389 53.142 24.488 67.808 1.00 38.44 O
ATOM 9 C3' U B1389 51.756 26.325 67.882 1.00 38.78 C
ATOM 10 O3' U B1389 50.764 27.087 67.236 1.00 38.90 O
ATOM 11 C2' U B1389 51.136 25.222 68.731 1.00 38.56 C
ATOM 12 O2' U B1389 50.178 24.491 67.981 1.00 38.36 O
ATOM 13 C1' U B1389 52.297 24.311 68.912 1.00 38.42 C
ATOM 14 N1 U B1389 53.017 24.608 70.107 1.00 38.56 N
ATOM 15 C2 U B1389 52.483 23.996 71.194 1.00 38.47 C
ATOM 16 O2 U B1389 51.505 23.284 71.114 1.00 38.28 O
ATOM 17 N3 U B1389 53.159 24.242 72.330 1.00 38.61 N
ATOM 18 C4 U B1389 54.281 24.996 72.449 1.00 38.82 C
ATOM 19 O4 U B1389 54.789 25.156 73.547 1.00 38.96 O
ATOM 20 C5 U B1389 54.746 25.601 71.266 1.00 38.90 C
ATOM 21 C6 U B1389 54.108 25.392 70.141 1.00 38.77 C
ATOM 22 P A B1390 50.959 28.590 66.720 1.00 38.16 P
ATOM 23 OP1 A B1390 49.618 29.114 66.483 1.00 38.24 O
ATOM 24 OP2 A B1390 51.904 28.552 65.579 1.00 38.14 O
ATOM 25 O5' A B1390 51.600 29.354 67.904 1.00 38.39 O
TER
Atoms:
OP1: (48.651,17.483,77.421)
OP2: (49.540,19.299,75.823)
C3': (45.372,17.389,73.628)
C1': (44.853,19.581,72.966)
C5': (45.886,18.130,76.004)
O4': (44.940,19.563,74.366)
C8: (47.195,20.524,73.115)
O2': (43.464,17.774,72.283)
C6: (47.797,21.853,69.916)
C5: (47.419,21.272,71.120)
C4: (46.181,20.727,71.171)
P: (48.401,18.689,76.578)
C4': (44.959,18.210,74.845)
C2': (44.794,18.144,72.469)
C2: (45.734,21.278,69.119)
N1: (46.915,21.823,68.906)
N3: (45.275,20.699,70.213)
N6: (48.978,22.427,69.703)
N7: (48.054,21.135,72.347)
N9: (46.036,20.268,72.446)
O5': (47.203,18.404,75.567)
O3': (44.931,16.052,73.678)
OP2: (49.540,19.299,75.823)
C3': (45.372,17.389,73.628)
C1': (44.853,19.581,72.966)
C5': (45.886,18.130,76.004)
O4': (44.940,19.563,74.366)
C8: (47.195,20.524,73.115)
O2': (43.464,17.774,72.283)
C6: (47.797,21.853,69.916)
C5: (47.419,21.272,71.120)
C4: (46.181,20.727,71.171)
P: (48.401,18.689,76.578)
C4': (44.959,18.210,74.845)
C2': (44.794,18.144,72.469)
C2: (45.734,21.278,69.119)
N1: (46.915,21.823,68.906)
N3: (45.275,20.699,70.213)
N6: (48.978,22.427,69.703)
N7: (48.054,21.135,72.347)
N9: (46.036,20.268,72.446)
O5': (47.203,18.404,75.567)
O3': (44.931,16.052,73.678)
C4: (54.281,24.996,72.449)
N3: (53.159,24.242,72.330)
OP1: (55.867,28.091,65.792)
OP2: (56.720,27.559,68.128)
C2: (52.483,23.996,71.194)
C1': (52.297,24.311,68.912)
C3': (51.756,26.325,67.882)
O5': (54.649,26.527,67.254)
O4': (53.142,24.488,67.808)
C5': (53.715,26.174,66.270)
P: (56.040,27.138,66.895)
C4': (52.588,25.489,66.928)
C2': (51.136,25.222,68.731)
O2': (50.178,24.491,67.981)
N1: (53.017,24.608,70.107)
O4: (54.789,25.156,73.547)
O2: (51.505,23.284,71.114)
C6: (54.108,25.392,70.141)
C5: (54.746,25.601,71.266)
O3': (50.764,27.087,67.236)
N3: (53.159,24.242,72.330)
OP1: (55.867,28.091,65.792)
OP2: (56.720,27.559,68.128)
C2: (52.483,23.996,71.194)
C1': (52.297,24.311,68.912)
C3': (51.756,26.325,67.882)
O5': (54.649,26.527,67.254)
O4': (53.142,24.488,67.808)
C5': (53.715,26.174,66.270)
P: (56.040,27.138,66.895)
C4': (52.588,25.489,66.928)
C2': (51.136,25.222,68.731)
O2': (50.178,24.491,67.981)
N1: (53.017,24.608,70.107)
O4: (54.789,25.156,73.547)
O2: (51.505,23.284,71.114)
C6: (54.108,25.392,70.141)
C5: (54.746,25.601,71.266)
O3': (50.764,27.087,67.236)
Image (generated by PyMOL):