Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A110:A111
Extra
PDB:
ATOM 1 O3' A A 109 82.041 153.542 46.481 1.00 45.57 O
ATOM 2 P A A 110 80.942 152.538 47.082 1.00 43.32 P
ATOM 3 OP1 A A 110 81.275 152.310 48.509 1.00 43.63 O
ATOM 4 OP2 A A 110 80.827 151.388 46.163 1.00 41.39 O
ATOM 5 O5' A A 110 79.591 153.371 47.003 1.00 42.41 O
ATOM 6 C5' A A 110 78.591 152.994 46.072 1.00 42.58 C
ATOM 7 C4' A A 110 77.259 152.941 46.746 1.00 41.73 C
ATOM 8 O4' A A 110 77.391 152.326 48.048 1.00 40.77 O
ATOM 9 C3' A A 110 76.670 154.290 47.079 1.00 41.00 C
ATOM 10 O3' A A 110 76.084 154.878 45.920 1.00 42.15 O
ATOM 11 C2' A A 110 75.630 153.901 48.111 1.00 40.44 C
ATOM 12 O2' A A 110 74.544 153.249 47.504 1.00 40.25 O
ATOM 13 C1' A A 110 76.393 152.847 48.911 1.00 40.73 C
ATOM 14 N9 A A 110 77.046 153.395 50.101 1.00 41.68 N
ATOM 15 C8 A A 110 78.316 153.103 50.557 1.00 40.15 C
ATOM 16 N7 A A 110 78.646 153.752 51.644 1.00 39.86 N
ATOM 17 C5 A A 110 77.526 154.523 51.931 1.00 40.20 C
ATOM 18 C6 A A 110 77.248 155.423 52.963 1.00 40.98 C
ATOM 19 N6 A A 110 78.096 155.691 53.954 1.00 42.31 N
ATOM 20 N1 A A 110 76.046 156.041 52.957 1.00 40.90 N
ATOM 21 C2 A A 110 75.173 155.744 51.986 1.00 41.45 C
ATOM 22 N3 A A 110 75.308 154.895 50.968 1.00 40.90 N
ATOM 23 C4 A A 110 76.527 154.312 50.994 1.00 40.89 C
ATOM 24 P U A 111 75.549 156.386 45.983 1.00 41.42 P
ATOM 25 OP1 U A 111 76.687 157.324 45.877 1.00 39.67 O
ATOM 26 OP2 U A 111 74.689 156.433 47.171 1.00 42.92 O
ATOM 27 O5' U A 111 74.612 156.542 44.705 1.00 42.56 O
TER
ATOM 1 O3' A B 110 76.084 154.878 45.920 1.00 42.15 O
ATOM 2 P U B 111 75.549 156.386 45.983 1.00 41.42 P
ATOM 3 OP1 U B 111 76.687 157.324 45.877 1.00 39.67 O
ATOM 4 OP2 U B 111 74.689 156.433 47.171 1.00 42.92 O
ATOM 5 O5' U B 111 74.612 156.542 44.705 1.00 42.56 O
ATOM 6 C5' U B 111 75.128 156.534 43.345 1.00 43.42 C
ATOM 7 C4' U B 111 74.008 156.196 42.390 1.00 44.42 C
ATOM 8 O4' U B 111 73.562 154.860 42.698 1.00 45.88 O
ATOM 9 C3' U B 111 72.739 157.034 42.505 1.00 45.37 C
ATOM 10 O3' U B 111 72.864 158.235 41.725 1.00 45.33 O
ATOM 11 C2' U B 111 71.663 156.092 41.959 1.00 46.03 C
ATOM 12 O2' U B 111 71.531 156.071 40.559 1.00 48.65 O
ATOM 13 C1' U B 111 72.208 154.719 42.341 1.00 47.36 C
ATOM 14 N1 U B 111 71.491 154.002 43.407 1.00 49.89 N
ATOM 15 C2 U B 111 70.412 153.183 43.049 1.00 51.11 C
ATOM 16 O2 U B 111 70.035 153.038 41.898 1.00 51.58 O
ATOM 17 N3 U B 111 69.799 152.541 44.102 1.00 50.19 N
ATOM 18 C4 U B 111 70.139 152.626 45.434 1.00 49.16 C
ATOM 19 O4 U B 111 69.501 151.983 46.264 1.00 48.97 O
ATOM 20 C5 U B 111 71.243 153.483 45.716 1.00 50.08 C
ATOM 21 C6 U B 111 71.865 154.126 44.723 1.00 50.42 C
ATOM 22 P C B 112 71.896 159.509 41.984 1.00 44.45 P
ATOM 23 OP1 C B 112 70.876 159.279 43.038 1.00 45.31 O
ATOM 24 OP2 C B 112 71.458 159.994 40.657 1.00 43.60 O
ATOM 25 O5' C B 112 72.914 160.582 42.551 1.00 43.25 O
TER
ATOM 2 P A A 110 80.942 152.538 47.082 1.00 43.32 P
ATOM 3 OP1 A A 110 81.275 152.310 48.509 1.00 43.63 O
ATOM 4 OP2 A A 110 80.827 151.388 46.163 1.00 41.39 O
ATOM 5 O5' A A 110 79.591 153.371 47.003 1.00 42.41 O
ATOM 6 C5' A A 110 78.591 152.994 46.072 1.00 42.58 C
ATOM 7 C4' A A 110 77.259 152.941 46.746 1.00 41.73 C
ATOM 8 O4' A A 110 77.391 152.326 48.048 1.00 40.77 O
ATOM 9 C3' A A 110 76.670 154.290 47.079 1.00 41.00 C
ATOM 10 O3' A A 110 76.084 154.878 45.920 1.00 42.15 O
ATOM 11 C2' A A 110 75.630 153.901 48.111 1.00 40.44 C
ATOM 12 O2' A A 110 74.544 153.249 47.504 1.00 40.25 O
ATOM 13 C1' A A 110 76.393 152.847 48.911 1.00 40.73 C
ATOM 14 N9 A A 110 77.046 153.395 50.101 1.00 41.68 N
ATOM 15 C8 A A 110 78.316 153.103 50.557 1.00 40.15 C
ATOM 16 N7 A A 110 78.646 153.752 51.644 1.00 39.86 N
ATOM 17 C5 A A 110 77.526 154.523 51.931 1.00 40.20 C
ATOM 18 C6 A A 110 77.248 155.423 52.963 1.00 40.98 C
ATOM 19 N6 A A 110 78.096 155.691 53.954 1.00 42.31 N
ATOM 20 N1 A A 110 76.046 156.041 52.957 1.00 40.90 N
ATOM 21 C2 A A 110 75.173 155.744 51.986 1.00 41.45 C
ATOM 22 N3 A A 110 75.308 154.895 50.968 1.00 40.90 N
ATOM 23 C4 A A 110 76.527 154.312 50.994 1.00 40.89 C
ATOM 24 P U A 111 75.549 156.386 45.983 1.00 41.42 P
ATOM 25 OP1 U A 111 76.687 157.324 45.877 1.00 39.67 O
ATOM 26 OP2 U A 111 74.689 156.433 47.171 1.00 42.92 O
ATOM 27 O5' U A 111 74.612 156.542 44.705 1.00 42.56 O
TER
ATOM 1 O3' A B 110 76.084 154.878 45.920 1.00 42.15 O
ATOM 2 P U B 111 75.549 156.386 45.983 1.00 41.42 P
ATOM 3 OP1 U B 111 76.687 157.324 45.877 1.00 39.67 O
ATOM 4 OP2 U B 111 74.689 156.433 47.171 1.00 42.92 O
ATOM 5 O5' U B 111 74.612 156.542 44.705 1.00 42.56 O
ATOM 6 C5' U B 111 75.128 156.534 43.345 1.00 43.42 C
ATOM 7 C4' U B 111 74.008 156.196 42.390 1.00 44.42 C
ATOM 8 O4' U B 111 73.562 154.860 42.698 1.00 45.88 O
ATOM 9 C3' U B 111 72.739 157.034 42.505 1.00 45.37 C
ATOM 10 O3' U B 111 72.864 158.235 41.725 1.00 45.33 O
ATOM 11 C2' U B 111 71.663 156.092 41.959 1.00 46.03 C
ATOM 12 O2' U B 111 71.531 156.071 40.559 1.00 48.65 O
ATOM 13 C1' U B 111 72.208 154.719 42.341 1.00 47.36 C
ATOM 14 N1 U B 111 71.491 154.002 43.407 1.00 49.89 N
ATOM 15 C2 U B 111 70.412 153.183 43.049 1.00 51.11 C
ATOM 16 O2 U B 111 70.035 153.038 41.898 1.00 51.58 O
ATOM 17 N3 U B 111 69.799 152.541 44.102 1.00 50.19 N
ATOM 18 C4 U B 111 70.139 152.626 45.434 1.00 49.16 C
ATOM 19 O4 U B 111 69.501 151.983 46.264 1.00 48.97 O
ATOM 20 C5 U B 111 71.243 153.483 45.716 1.00 50.08 C
ATOM 21 C6 U B 111 71.865 154.126 44.723 1.00 50.42 C
ATOM 22 P C B 112 71.896 159.509 41.984 1.00 44.45 P
ATOM 23 OP1 C B 112 70.876 159.279 43.038 1.00 45.31 O
ATOM 24 OP2 C B 112 71.458 159.994 40.657 1.00 43.60 O
ATOM 25 O5' C B 112 72.914 160.582 42.551 1.00 43.25 O
TER
Atoms:
OP1: (81.275,152.310,48.509)
OP2: (80.827,151.388,46.163)
C3': (76.670,154.290,47.079)
C1': (76.393,152.847,48.911)
C5': (78.591,152.994,46.072)
O4': (77.391,152.326,48.048)
C8: (78.316,153.103,50.557)
O2': (74.544,153.249,47.504)
C6: (77.248,155.423,52.963)
C5: (77.526,154.523,51.931)
C4: (76.527,154.312,50.994)
P: (80.942,152.538,47.082)
C4': (77.259,152.941,46.746)
C2': (75.630,153.901,48.111)
C2: (75.173,155.744,51.986)
N1: (76.046,156.041,52.957)
N3: (75.308,154.895,50.968)
N6: (78.096,155.691,53.954)
N7: (78.646,153.752,51.644)
N9: (77.046,153.395,50.101)
O5': (79.591,153.371,47.003)
O3': (76.084,154.878,45.920)
OP2: (80.827,151.388,46.163)
C3': (76.670,154.290,47.079)
C1': (76.393,152.847,48.911)
C5': (78.591,152.994,46.072)
O4': (77.391,152.326,48.048)
C8: (78.316,153.103,50.557)
O2': (74.544,153.249,47.504)
C6: (77.248,155.423,52.963)
C5: (77.526,154.523,51.931)
C4: (76.527,154.312,50.994)
P: (80.942,152.538,47.082)
C4': (77.259,152.941,46.746)
C2': (75.630,153.901,48.111)
C2: (75.173,155.744,51.986)
N1: (76.046,156.041,52.957)
N3: (75.308,154.895,50.968)
N6: (78.096,155.691,53.954)
N7: (78.646,153.752,51.644)
N9: (77.046,153.395,50.101)
O5': (79.591,153.371,47.003)
O3': (76.084,154.878,45.920)
C4: (70.139,152.626,45.434)
N3: (69.799,152.541,44.102)
OP1: (76.687,157.324,45.877)
OP2: (74.689,156.433,47.171)
C2: (70.412,153.183,43.049)
C1': (72.208,154.719,42.341)
C3': (72.739,157.034,42.505)
O5': (74.612,156.542,44.705)
O4': (73.562,154.860,42.698)
C5': (75.128,156.534,43.345)
P: (75.549,156.386,45.983)
C4': (74.008,156.196,42.390)
C2': (71.663,156.092,41.959)
O2': (71.531,156.071,40.559)
N1: (71.491,154.002,43.407)
O4: (69.501,151.983,46.264)
O2: (70.035,153.038,41.898)
C6: (71.865,154.126,44.723)
C5: (71.243,153.483,45.716)
O3': (72.864,158.235,41.725)
N3: (69.799,152.541,44.102)
OP1: (76.687,157.324,45.877)
OP2: (74.689,156.433,47.171)
C2: (70.412,153.183,43.049)
C1': (72.208,154.719,42.341)
C3': (72.739,157.034,42.505)
O5': (74.612,156.542,44.705)
O4': (73.562,154.860,42.698)
C5': (75.128,156.534,43.345)
P: (75.549,156.386,45.983)
C4': (74.008,156.196,42.390)
C2': (71.663,156.092,41.959)
O2': (71.531,156.071,40.559)
N1: (71.491,154.002,43.407)
O4: (69.501,151.983,46.264)
O2: (70.035,153.038,41.898)
C6: (71.865,154.126,44.723)
C5: (71.243,153.483,45.716)
O3': (72.864,158.235,41.725)
Image (generated by PyMOL):