Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:B41:B40
Extra
PDB:
ATOM 1 O3' U A 40 -107.667 160.514 131.961 1.00 42.88 O
ATOM 2 P C A 41 -108.329 160.529 130.497 1.00 73.73 P
ATOM 3 OP1 C A 41 -107.263 160.193 129.518 1.00 26.78 O
ATOM 4 OP2 C A 41 -109.029 161.828 130.373 1.00 26.86 O
ATOM 5 O5' C A 41 -109.418 159.354 130.517 1.00 27.50 O
ATOM 6 C5' C A 41 -110.134 159.010 129.305 1.00 27.50 C
ATOM 7 C4' C A 41 -111.455 158.293 129.587 1.00 27.50 C
ATOM 8 O4' C A 41 -111.263 156.883 129.853 1.00 27.50 O
ATOM 9 C3' C A 41 -112.385 158.727 130.709 1.00 27.50 C
ATOM 10 O3' C A 41 -113.136 159.892 130.405 1.00 27.50 O
ATOM 11 C2' C A 41 -113.345 157.544 130.805 1.00 27.50 C
ATOM 12 O2' C A 41 -114.397 157.628 129.867 1.00 27.50 O
ATOM 13 C1' C A 41 -112.454 156.364 130.416 1.00 27.50 C
ATOM 14 N1 C A 41 -112.138 155.505 131.568 1.00 39.88 N
ATOM 15 C2 C A 41 -112.863 154.315 131.739 1.00 39.88 C
ATOM 16 O2 C A 41 -113.713 153.993 130.892 1.00 39.84 O
ATOM 17 N3 C A 41 -112.624 153.549 132.820 1.00 39.93 N
ATOM 18 C4 C A 41 -111.706 153.922 133.709 1.00 39.94 C
ATOM 19 N4 C A 41 -111.521 153.143 134.776 1.00 39.90 N
ATOM 20 C5 C A 41 -110.939 155.110 133.549 1.00 39.96 C
ATOM 21 C6 C A 41 -111.182 155.864 132.472 1.00 39.96 C
ATOM 22 P C A 42 -114.059 160.553 131.542 1.00 36.17 P
ATOM 23 OP1 C A 42 -114.366 161.947 131.103 1.00 38.11 O
ATOM 24 OP2 C A 42 -113.460 160.315 132.889 1.00 38.01 O
ATOM 25 O5' C A 42 -115.385 159.690 131.463 1.00 23.66 O
TER
ATOM 1 O3' U B 39 -109.221 159.169 137.395 1.00 85.23 O
ATOM 2 P U B 40 -108.905 157.832 136.558 1.00 49.24 P
ATOM 3 OP1 U B 40 -110.184 157.113 136.344 1.00 36.59 O
ATOM 4 OP2 U B 40 -107.795 157.146 137.270 1.00 36.68 O
ATOM 5 O5' U B 40 -108.343 158.341 135.147 1.00 42.88 O
ATOM 6 C5' U B 40 -107.627 159.590 135.043 1.00 42.88 C
ATOM 7 C4' U B 40 -106.628 159.572 133.900 1.00 42.88 C
ATOM 8 O4' U B 40 -105.618 158.556 134.112 1.00 42.88 O
ATOM 9 C3' U B 40 -107.123 159.310 132.490 1.00 42.88 C
ATOM 10 O3' U B 40 -107.667 160.514 131.961 1.00 42.88 O
ATOM 11 C2' U B 40 -105.839 158.895 131.757 1.00 42.88 C
ATOM 12 O2' U B 40 -105.100 159.991 131.242 1.00 42.88 O
ATOM 13 C1' U B 40 -105.011 158.247 132.872 1.00 42.88 C
ATOM 14 N1 U B 40 -104.806 156.792 132.778 1.00134.08 N
ATOM 15 C2 U B 40 -103.600 156.341 132.258 1.00134.06 C
ATOM 16 O2 U B 40 -102.726 157.088 131.849 1.00134.04 O
ATOM 17 N3 U B 40 -103.457 154.977 132.232 1.00134.05 N
ATOM 18 C4 U B 40 -104.375 154.037 132.654 1.00134.03 C
ATOM 19 O4 U B 40 -104.082 152.840 132.605 1.00134.05 O
ATOM 20 C5 U B 40 -105.598 154.580 133.157 1.00133.98 C
ATOM 21 C6 U B 40 -105.768 155.904 133.201 1.00134.01 C
ATOM 22 P C B 41 -108.329 160.529 130.497 1.00 73.73 P
ATOM 23 OP1 C B 41 -107.263 160.193 129.518 1.00 26.78 O
ATOM 24 OP2 C B 41 -109.029 161.828 130.373 1.00 26.86 O
ATOM 25 O5' C B 41 -109.418 159.354 130.517 1.00 27.50 O
TER
ATOM 2 P C A 41 -108.329 160.529 130.497 1.00 73.73 P
ATOM 3 OP1 C A 41 -107.263 160.193 129.518 1.00 26.78 O
ATOM 4 OP2 C A 41 -109.029 161.828 130.373 1.00 26.86 O
ATOM 5 O5' C A 41 -109.418 159.354 130.517 1.00 27.50 O
ATOM 6 C5' C A 41 -110.134 159.010 129.305 1.00 27.50 C
ATOM 7 C4' C A 41 -111.455 158.293 129.587 1.00 27.50 C
ATOM 8 O4' C A 41 -111.263 156.883 129.853 1.00 27.50 O
ATOM 9 C3' C A 41 -112.385 158.727 130.709 1.00 27.50 C
ATOM 10 O3' C A 41 -113.136 159.892 130.405 1.00 27.50 O
ATOM 11 C2' C A 41 -113.345 157.544 130.805 1.00 27.50 C
ATOM 12 O2' C A 41 -114.397 157.628 129.867 1.00 27.50 O
ATOM 13 C1' C A 41 -112.454 156.364 130.416 1.00 27.50 C
ATOM 14 N1 C A 41 -112.138 155.505 131.568 1.00 39.88 N
ATOM 15 C2 C A 41 -112.863 154.315 131.739 1.00 39.88 C
ATOM 16 O2 C A 41 -113.713 153.993 130.892 1.00 39.84 O
ATOM 17 N3 C A 41 -112.624 153.549 132.820 1.00 39.93 N
ATOM 18 C4 C A 41 -111.706 153.922 133.709 1.00 39.94 C
ATOM 19 N4 C A 41 -111.521 153.143 134.776 1.00 39.90 N
ATOM 20 C5 C A 41 -110.939 155.110 133.549 1.00 39.96 C
ATOM 21 C6 C A 41 -111.182 155.864 132.472 1.00 39.96 C
ATOM 22 P C A 42 -114.059 160.553 131.542 1.00 36.17 P
ATOM 23 OP1 C A 42 -114.366 161.947 131.103 1.00 38.11 O
ATOM 24 OP2 C A 42 -113.460 160.315 132.889 1.00 38.01 O
ATOM 25 O5' C A 42 -115.385 159.690 131.463 1.00 23.66 O
TER
ATOM 1 O3' U B 39 -109.221 159.169 137.395 1.00 85.23 O
ATOM 2 P U B 40 -108.905 157.832 136.558 1.00 49.24 P
ATOM 3 OP1 U B 40 -110.184 157.113 136.344 1.00 36.59 O
ATOM 4 OP2 U B 40 -107.795 157.146 137.270 1.00 36.68 O
ATOM 5 O5' U B 40 -108.343 158.341 135.147 1.00 42.88 O
ATOM 6 C5' U B 40 -107.627 159.590 135.043 1.00 42.88 C
ATOM 7 C4' U B 40 -106.628 159.572 133.900 1.00 42.88 C
ATOM 8 O4' U B 40 -105.618 158.556 134.112 1.00 42.88 O
ATOM 9 C3' U B 40 -107.123 159.310 132.490 1.00 42.88 C
ATOM 10 O3' U B 40 -107.667 160.514 131.961 1.00 42.88 O
ATOM 11 C2' U B 40 -105.839 158.895 131.757 1.00 42.88 C
ATOM 12 O2' U B 40 -105.100 159.991 131.242 1.00 42.88 O
ATOM 13 C1' U B 40 -105.011 158.247 132.872 1.00 42.88 C
ATOM 14 N1 U B 40 -104.806 156.792 132.778 1.00134.08 N
ATOM 15 C2 U B 40 -103.600 156.341 132.258 1.00134.06 C
ATOM 16 O2 U B 40 -102.726 157.088 131.849 1.00134.04 O
ATOM 17 N3 U B 40 -103.457 154.977 132.232 1.00134.05 N
ATOM 18 C4 U B 40 -104.375 154.037 132.654 1.00134.03 C
ATOM 19 O4 U B 40 -104.082 152.840 132.605 1.00134.05 O
ATOM 20 C5 U B 40 -105.598 154.580 133.157 1.00133.98 C
ATOM 21 C6 U B 40 -105.768 155.904 133.201 1.00134.01 C
ATOM 22 P C B 41 -108.329 160.529 130.497 1.00 73.73 P
ATOM 23 OP1 C B 41 -107.263 160.193 129.518 1.00 26.78 O
ATOM 24 OP2 C B 41 -109.029 161.828 130.373 1.00 26.86 O
ATOM 25 O5' C B 41 -109.418 159.354 130.517 1.00 27.50 O
TER
Atoms:
C2: (-112.863,154.315,131.739)
OP1: (-107.263,160.193,129.518)
OP2: (-109.029,161.828,130.373)
C4: (-111.706,153.922,133.709)
O5': (-109.418,159.354,130.517)
C3': (-112.385,158.727,130.709)
C1': (-112.454,156.364,130.416)
O4': (-111.263,156.883,129.853)
C5': (-110.134,159.010,129.305)
P: (-108.329,160.529,130.497)
O2: (-113.713,153.993,130.892)
C4': (-111.455,158.293,129.587)
C2': (-113.345,157.544,130.805)
O2': (-114.397,157.628,129.867)
N1: (-112.138,155.505,131.568)
N3: (-112.624,153.549,132.820)
N4: (-111.521,153.143,134.776)
C6: (-111.182,155.864,132.472)
C5: (-110.939,155.110,133.549)
O3': (-113.136,159.892,130.405)
OP1: (-107.263,160.193,129.518)
OP2: (-109.029,161.828,130.373)
C4: (-111.706,153.922,133.709)
O5': (-109.418,159.354,130.517)
C3': (-112.385,158.727,130.709)
C1': (-112.454,156.364,130.416)
O4': (-111.263,156.883,129.853)
C5': (-110.134,159.010,129.305)
P: (-108.329,160.529,130.497)
O2: (-113.713,153.993,130.892)
C4': (-111.455,158.293,129.587)
C2': (-113.345,157.544,130.805)
O2': (-114.397,157.628,129.867)
N1: (-112.138,155.505,131.568)
N3: (-112.624,153.549,132.820)
N4: (-111.521,153.143,134.776)
C6: (-111.182,155.864,132.472)
C5: (-110.939,155.110,133.549)
O3': (-113.136,159.892,130.405)
C4: (-104.375,154.037,132.654)
N3: (-103.457,154.977,132.232)
OP1: (-110.184,157.113,136.344)
OP2: (-107.795,157.146,137.270)
C2: (-103.600,156.341,132.258)
C1': (-105.011,158.247,132.872)
C3': (-107.123,159.310,132.490)
O5': (-108.343,158.341,135.147)
O4': (-105.618,158.556,134.112)
C5': (-107.627,159.590,135.043)
P: (-108.905,157.832,136.558)
C4': (-106.628,159.572,133.900)
C2': (-105.839,158.895,131.757)
O2': (-105.100,159.991,131.242)
N1: (-104.806,156.792,132.778)
O4: (-104.082,152.840,132.605)
O2: (-102.726,157.088,131.849)
C6: (-105.768,155.904,133.201)
C5: (-105.598,154.580,133.157)
O3': (-107.667,160.514,131.961)
N3: (-103.457,154.977,132.232)
OP1: (-110.184,157.113,136.344)
OP2: (-107.795,157.146,137.270)
C2: (-103.600,156.341,132.258)
C1': (-105.011,158.247,132.872)
C3': (-107.123,159.310,132.490)
O5': (-108.343,158.341,135.147)
O4': (-105.618,158.556,134.112)
C5': (-107.627,159.590,135.043)
P: (-108.905,157.832,136.558)
C4': (-106.628,159.572,133.900)
C2': (-105.839,158.895,131.757)
O2': (-105.100,159.991,131.242)
N1: (-104.806,156.792,132.778)
O4: (-104.082,152.840,132.605)
O2: (-102.726,157.088,131.849)
C6: (-105.768,155.904,133.201)
C5: (-105.598,154.580,133.157)
O3': (-107.667,160.514,131.961)
Image (generated by PyMOL):