ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1635:A1634

Extra

PDB:
ATOM 1 O3' U A1634 -53.502 -5.134 -1.761 1.00 18.59 O
ATOM 2 P C A1635 -52.444 -3.956 -1.931 1.00 3.26 P
ATOM 3 OP1 C A1635 -51.772 -3.825 -0.612 1.00 19.40 O
ATOM 4 OP2 C A1635 -53.159 -2.789 -2.522 1.00 19.40 O
ATOM 5 O5' C A1635 -51.363 -4.494 -2.968 1.00 8.05 O
ATOM 6 C5' C A1635 -50.125 -3.771 -3.160 1.00 8.05 C
ATOM 7 C4' C A1635 -49.911 -3.479 -4.624 1.00 8.05 C
ATOM 8 O4' C A1635 -51.162 -3.222 -5.313 1.00 8.05 O
ATOM 9 C3' C A1635 -49.294 -4.528 -5.511 1.00 8.05 C
ATOM 10 O3' C A1635 -48.218 -4.152 -6.352 1.00 8.05 O
ATOM 11 C2' C A1635 -50.483 -5.405 -5.927 1.00 8.05 C
ATOM 12 O2' C A1635 -50.736 -6.408 -4.973 1.00 8.05 O
ATOM 13 C1' C A1635 -51.664 -4.444 -5.782 1.00 8.05 C
ATOM 14 N1 C A1635 -52.587 -4.208 -6.901 1.00 17.81 N
ATOM 15 C2 C A1635 -52.096 -4.064 -8.211 1.00 17.81 C
ATOM 16 O2 C A1635 -50.862 -4.078 -8.410 1.00 17.81 O
ATOM 17 N3 C A1635 -52.984 -3.888 -9.221 1.00 17.81 N
ATOM 18 C4 C A1635 -54.294 -3.812 -8.957 1.00 17.81 C
ATOM 19 N4 C A1635 -55.126 -3.613 -9.975 1.00 17.81 N
ATOM 20 C5 C A1635 -54.807 -3.930 -7.637 1.00 17.81 C
ATOM 21 C6 C A1635 -53.930 -4.133 -6.653 1.00 17.81 C
ATOM 22 P G A1636 -46.699 -4.250 -5.802 1.00 27.41 P
ATOM 23 OP1 G A1636 -46.580 -3.262 -4.693 1.00 30.15 O
ATOM 24 OP2 G A1636 -45.740 -4.208 -6.940 1.00 30.15 O
ATOM 25 O5' G A1636 -46.566 -5.684 -5.120 1.00 24.50 O
TER

ATOM 1 O3' U B1633 -58.528 -5.958 -5.752 1.00 4.26 O
ATOM 2 P U B1634 -58.153 -4.476 -5.217 1.00 10.46 P
ATOM 3 OP1 U B1634 -59.372 -3.924 -4.554 1.00 10.46 O
ATOM 4 OP2 U B1634 -57.474 -3.692 -6.279 1.00 10.46 O
ATOM 5 O5' U B1634 -57.075 -4.784 -4.091 1.00 18.59 O
ATOM 6 C5' U B1634 -56.544 -3.741 -3.271 1.00 18.59 C
ATOM 7 C4' U B1634 -55.711 -4.341 -2.177 1.00 18.59 C
ATOM 8 O4' U B1634 -56.566 -5.171 -1.354 1.00 18.59 O
ATOM 9 C3' U B1634 -54.582 -5.239 -2.667 1.00 18.59 C
ATOM 10 O3' U B1634 -53.502 -5.134 -1.761 1.00 18.59 O
ATOM 11 C2' U B1634 -55.172 -6.640 -2.552 1.00 18.59 C
ATOM 12 O2' U B1634 -54.197 -7.636 -2.294 1.00 18.59 O
ATOM 13 C1' U B1634 -56.069 -6.489 -1.333 1.00 18.59 C
ATOM 14 N1 U B1634 -57.209 -7.411 -1.315 1.00 0.79 N
ATOM 15 C2 U B1634 -57.288 -8.327 -0.266 1.00 0.79 C
ATOM 16 O2 U B1634 -56.429 -8.445 0.587 1.00 0.79 O
ATOM 17 N3 U B1634 -58.407 -9.100 -0.259 1.00 0.79 N
ATOM 18 C4 U B1634 -59.432 -9.059 -1.168 1.00 0.79 C
ATOM 19 O4 U B1634 -60.449 -9.712 -0.952 1.00 0.79 O
ATOM 20 C5 U B1634 -59.254 -8.128 -2.239 1.00 0.79 C
ATOM 21 C6 U B1634 -58.175 -7.359 -2.277 1.00 0.79 C
ATOM 22 P C B1635 -52.444 -3.956 -1.931 1.00 3.26 P
ATOM 23 OP1 C B1635 -51.772 -3.825 -0.612 1.00 19.40 O
ATOM 24 OP2 C B1635 -53.159 -2.789 -2.522 1.00 19.40 O
ATOM 25 O5' C B1635 -51.363 -4.494 -2.968 1.00 8.05 O
TER

Atoms:
C2: (-52.096,-4.064,-8.211)
OP1: (-51.772,-3.825,-0.612)
OP2: (-53.159,-2.789,-2.522)
C4: (-54.294,-3.812,-8.957)
O5': (-51.363,-4.494,-2.968)
C3': (-49.294,-4.528,-5.511)
C1': (-51.664,-4.444,-5.782)
O4': (-51.162,-3.222,-5.313)
C5': (-50.125,-3.771,-3.160)
P: (-52.444,-3.956,-1.931)
O2: (-50.862,-4.078,-8.410)
C4': (-49.911,-3.479,-4.624)
C2': (-50.483,-5.405,-5.927)
O2': (-50.736,-6.408,-4.973)
N1: (-52.587,-4.208,-6.901)
N3: (-52.984,-3.888,-9.221)
N4: (-55.126,-3.613,-9.975)
C6: (-53.930,-4.133,-6.653)
C5: (-54.807,-3.930,-7.637)
O3': (-48.218,-4.152,-6.352)
C4: (-59.432,-9.059,-1.168)
N3: (-58.407,-9.100,-0.259)
OP1: (-59.372,-3.924,-4.554)
OP2: (-57.474,-3.692,-6.279)
C2: (-57.288,-8.327,-0.266)
C1': (-56.069,-6.489,-1.333)
C3': (-54.582,-5.239,-2.667)
O5': (-57.075,-4.784,-4.091)
O4': (-56.566,-5.171,-1.354)
C5': (-56.544,-3.741,-3.271)
P: (-58.153,-4.476,-5.217)
C4': (-55.711,-4.341,-2.177)
C2': (-55.172,-6.640,-2.552)
O2': (-54.197,-7.636,-2.294)
N1: (-57.209,-7.411,-1.315)
O4: (-60.449,-9.712,-0.952)
O2: (-56.429,-8.445,0.587)
C6: (-58.175,-7.359,-2.277)
C5: (-59.254,-8.128,-2.239)
O3': (-53.502,-5.134,-1.761)
Image (generated by PyMOL):
PyMOL image
show in jmol