Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIL:A49:A41
Extra
PDB:
ATOM 1 O3' G A 48 -15.962 48.177 0.206 1.00 22.69 O
ATOM 2 P A A 49 -16.459 49.691 0.375 1.00 23.00 P
ATOM 3 OP1 A A 49 -17.784 49.806 -0.275 1.00 22.95 O
ATOM 4 OP2 A A 49 -15.364 50.603 -0.032 1.00 23.03 O
ATOM 5 O5' A A 49 -16.643 49.820 1.957 1.00 22.70 O
ATOM 6 C5' A A 49 -17.586 48.999 2.642 1.00 22.25 C
ATOM 7 C4' A A 49 -17.409 49.128 4.141 1.00 21.62 C
ATOM 8 O4' A A 49 -16.086 48.686 4.526 1.00 21.61 O
ATOM 9 C3' A A 49 -17.477 50.553 4.658 1.00 21.40 C
ATOM 10 O3' A A 49 -18.834 50.957 4.809 1.00 21.23 O
ATOM 11 C2' A A 49 -16.734 50.441 5.985 1.00 21.22 C
ATOM 12 O2' A A 49 -17.540 49.934 7.031 1.00 21.43 O
ATOM 13 C1' A A 49 -15.628 49.447 5.632 1.00 20.83 C
ATOM 14 N9 A A 49 -14.347 50.074 5.295 1.00 20.41 N
ATOM 15 C8 A A 49 -13.775 50.174 4.055 1.00 20.35 C
ATOM 16 N7 A A 49 -12.614 50.784 4.046 1.00 20.10 N
ATOM 17 C5 A A 49 -12.402 51.111 5.374 1.00 20.08 C
ATOM 18 C6 A A 49 -11.344 51.772 6.038 1.00 19.95 C
ATOM 19 N6 A A 49 -10.259 52.241 5.412 1.00 19.93 N
ATOM 20 N1 A A 49 -11.443 51.936 7.377 1.00 19.99 N
ATOM 21 C2 A A 49 -12.531 51.467 8.009 1.00 20.08 C
ATOM 22 N3 A A 49 -13.582 50.828 7.494 1.00 20.05 N
ATOM 23 C4 A A 49 -13.459 50.678 6.160 1.00 20.22 C
ATOM 24 P A A 50 -19.266 52.449 4.421 1.00 21.29 P
ATOM 25 OP1 A A 50 -20.727 52.565 4.638 1.00 21.32 O
ATOM 26 OP2 A A 50 -18.700 52.774 3.092 1.00 21.01 O
ATOM 27 O5' A A 50 -18.492 53.338 5.506 1.00 21.15 O
TER
ATOM 1 O3' C B 40 -3.943 55.550 1.670 1.00 25.99 O
ATOM 2 P A B 41 -3.937 54.157 2.456 1.00 24.81 P
ATOM 3 OP1 A B 41 -2.619 53.522 2.222 1.00 25.29 O
ATOM 4 OP2 A B 41 -5.172 53.418 2.103 1.00 24.53 O
ATOM 5 O5' A B 41 -4.057 54.611 3.989 1.00 23.61 O
ATOM 6 C5' A B 41 -2.904 54.954 4.754 1.00 21.58 C
ATOM 7 C4' A B 41 -2.814 54.092 6.002 1.00 20.58 C
ATOM 8 O4' A B 41 -4.029 54.241 6.785 1.00 19.74 O
ATOM 9 C3' A B 41 -2.648 52.593 5.740 1.00 20.06 C
ATOM 10 O3' A B 41 -1.596 52.058 6.541 1.00 20.28 O
ATOM 11 C2' A B 41 -4.012 52.015 6.120 1.00 19.46 C
ATOM 12 O2' A B 41 -3.947 50.681 6.587 1.00 19.62 O
ATOM 13 C1' A B 41 -4.423 52.965 7.242 1.00 18.71 C
ATOM 14 N9 A B 41 -5.855 52.956 7.550 1.00 17.92 N
ATOM 15 C8 A B 41 -6.896 53.009 6.663 1.00 17.53 C
ATOM 16 N7 A B 41 -8.081 52.975 7.227 1.00 17.21 N
ATOM 17 C5 A B 41 -7.798 52.891 8.580 1.00 17.24 C
ATOM 18 C6 A B 41 -8.625 52.819 9.723 1.00 16.99 C
ATOM 19 N6 A B 41 -9.960 52.826 9.658 1.00 17.29 N
ATOM 20 N1 A B 41 -8.026 52.744 10.935 1.00 16.82 N
ATOM 21 C2 A B 41 -6.687 52.741 11.000 1.00 16.85 C
ATOM 22 N3 A B 41 -5.808 52.802 9.995 1.00 17.18 N
ATOM 23 C4 A B 41 -6.430 52.878 8.800 1.00 17.32 C
ATOM 24 P G B 42 -0.082 52.029 6.016 1.00 20.66 P
ATOM 25 OP1 G B 42 0.522 53.351 6.292 1.00 20.87 O
ATOM 26 OP2 G B 42 -0.075 51.499 4.632 1.00 20.66 O
ATOM 27 O5' G B 42 0.600 50.930 6.954 1.00 19.93 O
TER
ATOM 2 P A A 49 -16.459 49.691 0.375 1.00 23.00 P
ATOM 3 OP1 A A 49 -17.784 49.806 -0.275 1.00 22.95 O
ATOM 4 OP2 A A 49 -15.364 50.603 -0.032 1.00 23.03 O
ATOM 5 O5' A A 49 -16.643 49.820 1.957 1.00 22.70 O
ATOM 6 C5' A A 49 -17.586 48.999 2.642 1.00 22.25 C
ATOM 7 C4' A A 49 -17.409 49.128 4.141 1.00 21.62 C
ATOM 8 O4' A A 49 -16.086 48.686 4.526 1.00 21.61 O
ATOM 9 C3' A A 49 -17.477 50.553 4.658 1.00 21.40 C
ATOM 10 O3' A A 49 -18.834 50.957 4.809 1.00 21.23 O
ATOM 11 C2' A A 49 -16.734 50.441 5.985 1.00 21.22 C
ATOM 12 O2' A A 49 -17.540 49.934 7.031 1.00 21.43 O
ATOM 13 C1' A A 49 -15.628 49.447 5.632 1.00 20.83 C
ATOM 14 N9 A A 49 -14.347 50.074 5.295 1.00 20.41 N
ATOM 15 C8 A A 49 -13.775 50.174 4.055 1.00 20.35 C
ATOM 16 N7 A A 49 -12.614 50.784 4.046 1.00 20.10 N
ATOM 17 C5 A A 49 -12.402 51.111 5.374 1.00 20.08 C
ATOM 18 C6 A A 49 -11.344 51.772 6.038 1.00 19.95 C
ATOM 19 N6 A A 49 -10.259 52.241 5.412 1.00 19.93 N
ATOM 20 N1 A A 49 -11.443 51.936 7.377 1.00 19.99 N
ATOM 21 C2 A A 49 -12.531 51.467 8.009 1.00 20.08 C
ATOM 22 N3 A A 49 -13.582 50.828 7.494 1.00 20.05 N
ATOM 23 C4 A A 49 -13.459 50.678 6.160 1.00 20.22 C
ATOM 24 P A A 50 -19.266 52.449 4.421 1.00 21.29 P
ATOM 25 OP1 A A 50 -20.727 52.565 4.638 1.00 21.32 O
ATOM 26 OP2 A A 50 -18.700 52.774 3.092 1.00 21.01 O
ATOM 27 O5' A A 50 -18.492 53.338 5.506 1.00 21.15 O
TER
ATOM 1 O3' C B 40 -3.943 55.550 1.670 1.00 25.99 O
ATOM 2 P A B 41 -3.937 54.157 2.456 1.00 24.81 P
ATOM 3 OP1 A B 41 -2.619 53.522 2.222 1.00 25.29 O
ATOM 4 OP2 A B 41 -5.172 53.418 2.103 1.00 24.53 O
ATOM 5 O5' A B 41 -4.057 54.611 3.989 1.00 23.61 O
ATOM 6 C5' A B 41 -2.904 54.954 4.754 1.00 21.58 C
ATOM 7 C4' A B 41 -2.814 54.092 6.002 1.00 20.58 C
ATOM 8 O4' A B 41 -4.029 54.241 6.785 1.00 19.74 O
ATOM 9 C3' A B 41 -2.648 52.593 5.740 1.00 20.06 C
ATOM 10 O3' A B 41 -1.596 52.058 6.541 1.00 20.28 O
ATOM 11 C2' A B 41 -4.012 52.015 6.120 1.00 19.46 C
ATOM 12 O2' A B 41 -3.947 50.681 6.587 1.00 19.62 O
ATOM 13 C1' A B 41 -4.423 52.965 7.242 1.00 18.71 C
ATOM 14 N9 A B 41 -5.855 52.956 7.550 1.00 17.92 N
ATOM 15 C8 A B 41 -6.896 53.009 6.663 1.00 17.53 C
ATOM 16 N7 A B 41 -8.081 52.975 7.227 1.00 17.21 N
ATOM 17 C5 A B 41 -7.798 52.891 8.580 1.00 17.24 C
ATOM 18 C6 A B 41 -8.625 52.819 9.723 1.00 16.99 C
ATOM 19 N6 A B 41 -9.960 52.826 9.658 1.00 17.29 N
ATOM 20 N1 A B 41 -8.026 52.744 10.935 1.00 16.82 N
ATOM 21 C2 A B 41 -6.687 52.741 11.000 1.00 16.85 C
ATOM 22 N3 A B 41 -5.808 52.802 9.995 1.00 17.18 N
ATOM 23 C4 A B 41 -6.430 52.878 8.800 1.00 17.32 C
ATOM 24 P G B 42 -0.082 52.029 6.016 1.00 20.66 P
ATOM 25 OP1 G B 42 0.522 53.351 6.292 1.00 20.87 O
ATOM 26 OP2 G B 42 -0.075 51.499 4.632 1.00 20.66 O
ATOM 27 O5' G B 42 0.600 50.930 6.954 1.00 19.93 O
TER
Atoms:
OP1: (-17.784,49.806,-0.275)
OP2: (-15.364,50.603,-0.032)
C3': (-17.477,50.553,4.658)
C1': (-15.628,49.447,5.632)
C5': (-17.586,48.999,2.642)
O4': (-16.086,48.686,4.526)
C8: (-13.775,50.174,4.055)
O2': (-17.540,49.934,7.031)
C6: (-11.344,51.772,6.038)
C5: (-12.402,51.111,5.374)
C4: (-13.459,50.678,6.160)
P: (-16.459,49.691,0.375)
C4': (-17.409,49.128,4.141)
C2': (-16.734,50.441,5.985)
C2: (-12.531,51.467,8.009)
N1: (-11.443,51.936,7.377)
N3: (-13.582,50.828,7.494)
N6: (-10.259,52.241,5.412)
N7: (-12.614,50.784,4.046)
N9: (-14.347,50.074,5.295)
O5': (-16.643,49.820,1.957)
O3': (-18.834,50.957,4.809)
OP2: (-15.364,50.603,-0.032)
C3': (-17.477,50.553,4.658)
C1': (-15.628,49.447,5.632)
C5': (-17.586,48.999,2.642)
O4': (-16.086,48.686,4.526)
C8: (-13.775,50.174,4.055)
O2': (-17.540,49.934,7.031)
C6: (-11.344,51.772,6.038)
C5: (-12.402,51.111,5.374)
C4: (-13.459,50.678,6.160)
P: (-16.459,49.691,0.375)
C4': (-17.409,49.128,4.141)
C2': (-16.734,50.441,5.985)
C2: (-12.531,51.467,8.009)
N1: (-11.443,51.936,7.377)
N3: (-13.582,50.828,7.494)
N6: (-10.259,52.241,5.412)
N7: (-12.614,50.784,4.046)
N9: (-14.347,50.074,5.295)
O5': (-16.643,49.820,1.957)
O3': (-18.834,50.957,4.809)
OP1: (-2.619,53.522,2.222)
OP2: (-5.172,53.418,2.103)
C3': (-2.648,52.593,5.740)
C1': (-4.423,52.965,7.242)
C5': (-2.904,54.954,4.754)
O4': (-4.029,54.241,6.785)
C8: (-6.896,53.009,6.663)
O2': (-3.947,50.681,6.587)
C6: (-8.625,52.819,9.723)
C5: (-7.798,52.891,8.580)
C4: (-6.430,52.878,8.800)
P: (-3.937,54.157,2.456)
C4': (-2.814,54.092,6.002)
C2': (-4.012,52.015,6.120)
C2: (-6.687,52.741,11.000)
N1: (-8.026,52.744,10.935)
N3: (-5.808,52.802,9.995)
N6: (-9.960,52.826,9.658)
N7: (-8.081,52.975,7.227)
N9: (-5.855,52.956,7.550)
O5': (-4.057,54.611,3.989)
O3': (-1.596,52.058,6.541)
OP2: (-5.172,53.418,2.103)
C3': (-2.648,52.593,5.740)
C1': (-4.423,52.965,7.242)
C5': (-2.904,54.954,4.754)
O4': (-4.029,54.241,6.785)
C8: (-6.896,53.009,6.663)
O2': (-3.947,50.681,6.587)
C6: (-8.625,52.819,9.723)
C5: (-7.798,52.891,8.580)
C4: (-6.430,52.878,8.800)
P: (-3.937,54.157,2.456)
C4': (-2.814,54.092,6.002)
C2': (-4.012,52.015,6.120)
C2: (-6.687,52.741,11.000)
N1: (-8.026,52.744,10.935)
N3: (-5.808,52.802,9.995)
N6: (-9.960,52.826,9.658)
N7: (-8.081,52.975,7.227)
N9: (-5.855,52.956,7.550)
O5': (-4.057,54.611,3.989)
O3': (-1.596,52.058,6.541)
Image (generated by PyMOL):