Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RD2:B58:B57
Extra
PDB:
ATOM 1 O3' U A 57 16.353 39.369 28.616 1.00 86.72 O
ATOM 2 P C A 58 17.298 40.496 29.272 1.00111.98 P
ATOM 3 OP1 C A 58 18.247 40.944 28.219 1.00 78.48 O
ATOM 4 OP2 C A 58 17.826 39.986 30.566 1.00 83.45 O
ATOM 5 O5' C A 58 16.312 41.709 29.566 1.00114.71 O
ATOM 6 C5' C A 58 16.242 42.826 28.683 1.00113.43 C
ATOM 7 C4' C A 58 15.923 44.078 29.461 1.00111.90 C
ATOM 8 O4' C A 58 14.628 43.911 30.102 1.00109.95 O
ATOM 9 C3' C A 58 16.876 44.377 30.608 1.00113.96 C
ATOM 10 O3' C A 58 18.021 45.097 30.159 1.00118.26 O
ATOM 11 C2' C A 58 16.007 45.203 31.550 1.00111.90 C
ATOM 12 O2' C A 58 15.910 46.565 31.179 1.00109.83 O
ATOM 13 C1' C A 58 14.650 44.513 31.387 1.00108.30 C
ATOM 14 N1 C A 58 14.411 43.463 32.388 1.00 76.06 N
ATOM 15 C2 C A 58 14.133 43.843 33.706 1.00 77.21 C
ATOM 16 O2 C A 58 14.103 45.052 33.988 1.00 79.84 O
ATOM 17 N3 C A 58 13.910 42.885 34.637 1.00 73.47 N
ATOM 18 C4 C A 58 13.957 41.595 34.292 1.00 73.16 C
ATOM 19 N4 C A 58 13.724 40.684 35.240 1.00 75.16 N
ATOM 20 C5 C A 58 14.242 41.182 32.955 1.00 71.56 C
ATOM 21 C6 C A 58 14.459 42.141 32.045 1.00 69.64 C
ATOM 22 P C A 59 19.334 45.164 31.085 1.00106.22 P
ATOM 23 OP1 C A 59 20.386 45.939 30.377 1.00104.90 O
ATOM 24 OP2 C A 59 19.620 43.780 31.536 1.00104.63 O
ATOM 25 O5' C A 59 18.866 46.003 32.356 1.00105.73 O
TER
ATOM 1 O3' A B 56 15.380 35.542 34.485 1.00 89.74 O
ATOM 2 P U B 57 15.388 37.078 34.011 1.00 80.61 P
ATOM 3 OP1 U B 57 16.229 37.853 34.962 1.00 77.66 O
ATOM 4 OP2 U B 57 13.978 37.480 33.784 1.00 77.34 O
ATOM 5 O5' U B 57 16.129 37.052 32.598 1.00 77.90 O
ATOM 6 C5' U B 57 16.067 38.175 31.721 1.00 74.76 C
ATOM 7 C4' U B 57 15.820 37.715 30.305 1.00 74.69 C
ATOM 8 O4' U B 57 14.832 36.665 30.316 1.00 72.66 O
ATOM 9 C3' U B 57 15.278 38.788 29.364 1.00 78.13 C
ATOM 10 O3' U B 57 16.353 39.369 28.616 1.00 86.72 O
ATOM 11 C2' U B 57 14.386 38.013 28.377 1.00 80.13 C
ATOM 12 O2' U B 57 14.992 37.779 27.121 1.00 85.71 O
ATOM 13 C1' U B 57 14.169 36.666 29.078 1.00 76.92 C
ATOM 14 N1 U B 57 12.803 36.157 29.245 1.00 72.82 N
ATOM 15 C2 U B 57 12.061 35.952 28.102 1.00 75.53 C
ATOM 16 O2 U B 57 12.452 36.278 26.999 1.00 76.55 O
ATOM 17 N3 U B 57 10.841 35.355 28.299 1.00 77.40 N
ATOM 18 C4 U B 57 10.293 34.970 29.503 1.00 79.36 C
ATOM 19 O4 U B 57 9.253 34.314 29.509 1.00 86.31 O
ATOM 20 C5 U B 57 11.095 35.275 30.642 1.00 75.98 C
ATOM 21 C6 U B 57 12.293 35.847 30.480 1.00 71.33 C
ATOM 22 P C B 58 17.298 40.496 29.272 1.00111.98 P
ATOM 23 OP1 C B 58 18.247 40.944 28.219 1.00 78.48 O
ATOM 24 OP2 C B 58 17.826 39.986 30.566 1.00 83.45 O
ATOM 25 O5' C B 58 16.312 41.709 29.566 1.00114.71 O
TER
ATOM 2 P C A 58 17.298 40.496 29.272 1.00111.98 P
ATOM 3 OP1 C A 58 18.247 40.944 28.219 1.00 78.48 O
ATOM 4 OP2 C A 58 17.826 39.986 30.566 1.00 83.45 O
ATOM 5 O5' C A 58 16.312 41.709 29.566 1.00114.71 O
ATOM 6 C5' C A 58 16.242 42.826 28.683 1.00113.43 C
ATOM 7 C4' C A 58 15.923 44.078 29.461 1.00111.90 C
ATOM 8 O4' C A 58 14.628 43.911 30.102 1.00109.95 O
ATOM 9 C3' C A 58 16.876 44.377 30.608 1.00113.96 C
ATOM 10 O3' C A 58 18.021 45.097 30.159 1.00118.26 O
ATOM 11 C2' C A 58 16.007 45.203 31.550 1.00111.90 C
ATOM 12 O2' C A 58 15.910 46.565 31.179 1.00109.83 O
ATOM 13 C1' C A 58 14.650 44.513 31.387 1.00108.30 C
ATOM 14 N1 C A 58 14.411 43.463 32.388 1.00 76.06 N
ATOM 15 C2 C A 58 14.133 43.843 33.706 1.00 77.21 C
ATOM 16 O2 C A 58 14.103 45.052 33.988 1.00 79.84 O
ATOM 17 N3 C A 58 13.910 42.885 34.637 1.00 73.47 N
ATOM 18 C4 C A 58 13.957 41.595 34.292 1.00 73.16 C
ATOM 19 N4 C A 58 13.724 40.684 35.240 1.00 75.16 N
ATOM 20 C5 C A 58 14.242 41.182 32.955 1.00 71.56 C
ATOM 21 C6 C A 58 14.459 42.141 32.045 1.00 69.64 C
ATOM 22 P C A 59 19.334 45.164 31.085 1.00106.22 P
ATOM 23 OP1 C A 59 20.386 45.939 30.377 1.00104.90 O
ATOM 24 OP2 C A 59 19.620 43.780 31.536 1.00104.63 O
ATOM 25 O5' C A 59 18.866 46.003 32.356 1.00105.73 O
TER
ATOM 1 O3' A B 56 15.380 35.542 34.485 1.00 89.74 O
ATOM 2 P U B 57 15.388 37.078 34.011 1.00 80.61 P
ATOM 3 OP1 U B 57 16.229 37.853 34.962 1.00 77.66 O
ATOM 4 OP2 U B 57 13.978 37.480 33.784 1.00 77.34 O
ATOM 5 O5' U B 57 16.129 37.052 32.598 1.00 77.90 O
ATOM 6 C5' U B 57 16.067 38.175 31.721 1.00 74.76 C
ATOM 7 C4' U B 57 15.820 37.715 30.305 1.00 74.69 C
ATOM 8 O4' U B 57 14.832 36.665 30.316 1.00 72.66 O
ATOM 9 C3' U B 57 15.278 38.788 29.364 1.00 78.13 C
ATOM 10 O3' U B 57 16.353 39.369 28.616 1.00 86.72 O
ATOM 11 C2' U B 57 14.386 38.013 28.377 1.00 80.13 C
ATOM 12 O2' U B 57 14.992 37.779 27.121 1.00 85.71 O
ATOM 13 C1' U B 57 14.169 36.666 29.078 1.00 76.92 C
ATOM 14 N1 U B 57 12.803 36.157 29.245 1.00 72.82 N
ATOM 15 C2 U B 57 12.061 35.952 28.102 1.00 75.53 C
ATOM 16 O2 U B 57 12.452 36.278 26.999 1.00 76.55 O
ATOM 17 N3 U B 57 10.841 35.355 28.299 1.00 77.40 N
ATOM 18 C4 U B 57 10.293 34.970 29.503 1.00 79.36 C
ATOM 19 O4 U B 57 9.253 34.314 29.509 1.00 86.31 O
ATOM 20 C5 U B 57 11.095 35.275 30.642 1.00 75.98 C
ATOM 21 C6 U B 57 12.293 35.847 30.480 1.00 71.33 C
ATOM 22 P C B 58 17.298 40.496 29.272 1.00111.98 P
ATOM 23 OP1 C B 58 18.247 40.944 28.219 1.00 78.48 O
ATOM 24 OP2 C B 58 17.826 39.986 30.566 1.00 83.45 O
ATOM 25 O5' C B 58 16.312 41.709 29.566 1.00114.71 O
TER
Atoms:
C2: (14.133,43.843,33.706)
OP1: (18.247,40.944,28.219)
OP2: (17.826,39.986,30.566)
C4: (13.957,41.595,34.292)
O5': (16.312,41.709,29.566)
C3': (16.876,44.377,30.608)
C1': (14.650,44.513,31.387)
O4': (14.628,43.911,30.102)
C5': (16.242,42.826,28.683)
P: (17.298,40.496,29.272)
O2: (14.103,45.052,33.988)
C4': (15.923,44.078,29.461)
C2': (16.007,45.203,31.550)
O2': (15.910,46.565,31.179)
N1: (14.411,43.463,32.388)
N3: (13.910,42.885,34.637)
N4: (13.724,40.684,35.240)
C6: (14.459,42.141,32.045)
C5: (14.242,41.182,32.955)
O3': (18.021,45.097,30.159)
OP1: (18.247,40.944,28.219)
OP2: (17.826,39.986,30.566)
C4: (13.957,41.595,34.292)
O5': (16.312,41.709,29.566)
C3': (16.876,44.377,30.608)
C1': (14.650,44.513,31.387)
O4': (14.628,43.911,30.102)
C5': (16.242,42.826,28.683)
P: (17.298,40.496,29.272)
O2: (14.103,45.052,33.988)
C4': (15.923,44.078,29.461)
C2': (16.007,45.203,31.550)
O2': (15.910,46.565,31.179)
N1: (14.411,43.463,32.388)
N3: (13.910,42.885,34.637)
N4: (13.724,40.684,35.240)
C6: (14.459,42.141,32.045)
C5: (14.242,41.182,32.955)
O3': (18.021,45.097,30.159)
C4: (10.293,34.970,29.503)
N3: (10.841,35.355,28.299)
OP1: (16.229,37.853,34.962)
OP2: (13.978,37.480,33.784)
C2: (12.061,35.952,28.102)
C1': (14.169,36.666,29.078)
C3': (15.278,38.788,29.364)
O5': (16.129,37.052,32.598)
O4': (14.832,36.665,30.316)
C5': (16.067,38.175,31.721)
P: (15.388,37.078,34.011)
C4': (15.820,37.715,30.305)
C2': (14.386,38.013,28.377)
O2': (14.992,37.779,27.121)
N1: (12.803,36.157,29.245)
O4: (9.253,34.314,29.509)
O2: (12.452,36.278,26.999)
C6: (12.293,35.847,30.480)
C5: (11.095,35.275,30.642)
O3': (16.353,39.369,28.616)
N3: (10.841,35.355,28.299)
OP1: (16.229,37.853,34.962)
OP2: (13.978,37.480,33.784)
C2: (12.061,35.952,28.102)
C1': (14.169,36.666,29.078)
C3': (15.278,38.788,29.364)
O5': (16.129,37.052,32.598)
O4': (14.832,36.665,30.316)
C5': (16.067,38.175,31.721)
P: (15.388,37.078,34.011)
C4': (15.820,37.715,30.305)
C2': (14.386,38.013,28.377)
O2': (14.992,37.779,27.121)
N1: (12.803,36.157,29.245)
O4: (9.253,34.314,29.509)
O2: (12.452,36.278,26.999)
C6: (12.293,35.847,30.480)
C5: (11.095,35.275,30.642)
O3': (16.353,39.369,28.616)
Image (generated by PyMOL):