Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12662:12640
Extra
PDB:
ATOM 1 O3' U A2661 21.793 20.995 20.143 1.00 44.52 O
ATOM 2 P A A2662 22.447 20.966 21.593 1.00 48.96 P
ATOM 3 OP1 A A2662 23.923 21.124 21.425 1.00 48.84 O
ATOM 4 OP2 A A2662 21.933 19.769 22.301 1.00 48.62 O
ATOM 5 O5' A A2662 21.838 22.272 22.206 1.00 49.11 O
ATOM 6 C5' A A2662 22.047 22.585 23.530 1.00 48.78 C
ATOM 7 C4' A A2662 21.120 23.640 23.983 1.00 48.99 C
ATOM 8 O4' A A2662 19.822 23.486 23.365 1.00 49.31 O
ATOM 9 C3' A A2662 20.835 23.570 25.435 1.00 48.63 C
ATOM 10 O3' A A2662 21.884 24.124 26.164 1.00 48.41 O
ATOM 11 C2' A A2662 19.546 24.329 25.553 1.00 48.94 C
ATOM 12 O2' A A2662 19.812 25.710 25.447 1.00 49.21 O
ATOM 13 C1' A A2662 18.828 23.863 24.287 1.00 49.29 C
ATOM 14 N9 A A2662 17.964 22.699 24.551 1.00 49.12 N
ATOM 15 C8 A A2662 18.118 21.383 24.201 1.00 48.94 C
ATOM 16 N7 A A2662 17.162 20.578 24.604 1.00 48.84 N
ATOM 17 C5 A A2662 16.291 21.431 25.271 1.00 48.96 C
ATOM 18 C6 A A2662 15.039 21.246 25.916 1.00 48.96 C
ATOM 19 N6 A A2662 14.409 20.083 26.065 1.00 48.81 N
ATOM 20 N1 A A2662 14.444 22.312 26.469 1.00 49.11 N
ATOM 21 C2 A A2662 15.031 23.501 26.371 1.00 49.27 C
ATOM 22 N3 A A2662 16.181 23.830 25.782 1.00 49.30 N
ATOM 23 C4 A A2662 16.781 22.735 25.246 1.00 49.13 C
ATOM 24 P A A2663 22.673 23.223 27.198 1.00 49.35 P
ATOM 25 OP1 A A2663 23.961 23.902 27.430 1.00 49.26 O
ATOM 26 OP2 A A2663 22.662 21.817 26.696 1.00 49.21 O
ATOM 27 O5' A A2663 21.753 23.344 28.458 1.00 49.19 O
TER
ATOM 1 O3' A B2639 14.804 14.022 30.011 1.00 53.45 O
ATOM 2 P U B2640 14.252 15.171 29.010 1.00 45.35 P
ATOM 3 OP1 U B2640 12.843 14.827 28.686 1.00 45.62 O
ATOM 4 OP2 U B2640 15.227 15.295 27.879 1.00 45.49 O
ATOM 5 O5' U B2640 14.309 16.473 29.903 1.00 45.32 O
ATOM 6 C5' U B2640 13.481 16.632 31.021 1.00 45.22 C
ATOM 7 C4' U B2640 12.769 17.963 30.974 1.00 45.57 C
ATOM 8 O4' U B2640 13.746 19.039 31.019 1.00 45.58 O
ATOM 9 C3' U B2640 11.913 18.223 29.721 1.00 46.06 C
ATOM 10 O3' U B2640 10.778 18.954 30.095 1.00 46.30 O
ATOM 11 C2' U B2640 12.792 19.131 28.891 1.00 46.26 C
ATOM 12 O2' U B2640 12.088 19.966 28.015 1.00 46.75 O
ATOM 13 C1' U B2640 13.467 19.947 29.974 1.00 46.03 C
ATOM 14 N1 U B2640 14.692 20.551 29.544 1.00 46.03 N
ATOM 15 C2 U B2640 14.855 21.902 29.730 1.00 46.21 C
ATOM 16 O2 U B2640 14.032 22.607 30.290 1.00 46.35 O
ATOM 17 N3 U B2640 16.041 22.408 29.253 1.00 46.23 N
ATOM 18 C4 U B2640 16.978 21.652 28.622 1.00 46.09 C
ATOM 19 O4 U B2640 17.978 22.179 28.246 1.00 46.13 O
ATOM 20 C5 U B2640 16.694 20.285 28.457 1.00 45.92 C
ATOM 21 C6 U B2640 15.564 19.774 28.904 1.00 45.90 C
ATOM 22 P C B2641 9.369 18.230 30.283 1.00 44.51 P
ATOM 23 OP1 C B2641 9.636 16.895 30.832 1.00 44.11 O
ATOM 24 OP2 C B2641 8.620 18.345 28.976 1.00 44.99 O
ATOM 25 O5' C B2641 8.706 19.139 31.400 1.00 44.53 O
TER
ATOM 2 P A A2662 22.447 20.966 21.593 1.00 48.96 P
ATOM 3 OP1 A A2662 23.923 21.124 21.425 1.00 48.84 O
ATOM 4 OP2 A A2662 21.933 19.769 22.301 1.00 48.62 O
ATOM 5 O5' A A2662 21.838 22.272 22.206 1.00 49.11 O
ATOM 6 C5' A A2662 22.047 22.585 23.530 1.00 48.78 C
ATOM 7 C4' A A2662 21.120 23.640 23.983 1.00 48.99 C
ATOM 8 O4' A A2662 19.822 23.486 23.365 1.00 49.31 O
ATOM 9 C3' A A2662 20.835 23.570 25.435 1.00 48.63 C
ATOM 10 O3' A A2662 21.884 24.124 26.164 1.00 48.41 O
ATOM 11 C2' A A2662 19.546 24.329 25.553 1.00 48.94 C
ATOM 12 O2' A A2662 19.812 25.710 25.447 1.00 49.21 O
ATOM 13 C1' A A2662 18.828 23.863 24.287 1.00 49.29 C
ATOM 14 N9 A A2662 17.964 22.699 24.551 1.00 49.12 N
ATOM 15 C8 A A2662 18.118 21.383 24.201 1.00 48.94 C
ATOM 16 N7 A A2662 17.162 20.578 24.604 1.00 48.84 N
ATOM 17 C5 A A2662 16.291 21.431 25.271 1.00 48.96 C
ATOM 18 C6 A A2662 15.039 21.246 25.916 1.00 48.96 C
ATOM 19 N6 A A2662 14.409 20.083 26.065 1.00 48.81 N
ATOM 20 N1 A A2662 14.444 22.312 26.469 1.00 49.11 N
ATOM 21 C2 A A2662 15.031 23.501 26.371 1.00 49.27 C
ATOM 22 N3 A A2662 16.181 23.830 25.782 1.00 49.30 N
ATOM 23 C4 A A2662 16.781 22.735 25.246 1.00 49.13 C
ATOM 24 P A A2663 22.673 23.223 27.198 1.00 49.35 P
ATOM 25 OP1 A A2663 23.961 23.902 27.430 1.00 49.26 O
ATOM 26 OP2 A A2663 22.662 21.817 26.696 1.00 49.21 O
ATOM 27 O5' A A2663 21.753 23.344 28.458 1.00 49.19 O
TER
ATOM 1 O3' A B2639 14.804 14.022 30.011 1.00 53.45 O
ATOM 2 P U B2640 14.252 15.171 29.010 1.00 45.35 P
ATOM 3 OP1 U B2640 12.843 14.827 28.686 1.00 45.62 O
ATOM 4 OP2 U B2640 15.227 15.295 27.879 1.00 45.49 O
ATOM 5 O5' U B2640 14.309 16.473 29.903 1.00 45.32 O
ATOM 6 C5' U B2640 13.481 16.632 31.021 1.00 45.22 C
ATOM 7 C4' U B2640 12.769 17.963 30.974 1.00 45.57 C
ATOM 8 O4' U B2640 13.746 19.039 31.019 1.00 45.58 O
ATOM 9 C3' U B2640 11.913 18.223 29.721 1.00 46.06 C
ATOM 10 O3' U B2640 10.778 18.954 30.095 1.00 46.30 O
ATOM 11 C2' U B2640 12.792 19.131 28.891 1.00 46.26 C
ATOM 12 O2' U B2640 12.088 19.966 28.015 1.00 46.75 O
ATOM 13 C1' U B2640 13.467 19.947 29.974 1.00 46.03 C
ATOM 14 N1 U B2640 14.692 20.551 29.544 1.00 46.03 N
ATOM 15 C2 U B2640 14.855 21.902 29.730 1.00 46.21 C
ATOM 16 O2 U B2640 14.032 22.607 30.290 1.00 46.35 O
ATOM 17 N3 U B2640 16.041 22.408 29.253 1.00 46.23 N
ATOM 18 C4 U B2640 16.978 21.652 28.622 1.00 46.09 C
ATOM 19 O4 U B2640 17.978 22.179 28.246 1.00 46.13 O
ATOM 20 C5 U B2640 16.694 20.285 28.457 1.00 45.92 C
ATOM 21 C6 U B2640 15.564 19.774 28.904 1.00 45.90 C
ATOM 22 P C B2641 9.369 18.230 30.283 1.00 44.51 P
ATOM 23 OP1 C B2641 9.636 16.895 30.832 1.00 44.11 O
ATOM 24 OP2 C B2641 8.620 18.345 28.976 1.00 44.99 O
ATOM 25 O5' C B2641 8.706 19.139 31.400 1.00 44.53 O
TER
Atoms:
OP1: (23.923,21.124,21.425)
OP2: (21.933,19.769,22.301)
C3': (20.835,23.570,25.435)
C1': (18.828,23.863,24.287)
C5': (22.047,22.585,23.530)
O4': (19.822,23.486,23.365)
C8: (18.118,21.383,24.201)
O2': (19.812,25.710,25.447)
C6: (15.039,21.246,25.916)
C5: (16.291,21.431,25.271)
C4: (16.781,22.735,25.246)
P: (22.447,20.966,21.593)
C4': (21.120,23.640,23.983)
C2': (19.546,24.329,25.553)
C2: (15.031,23.501,26.371)
N1: (14.444,22.312,26.469)
N3: (16.181,23.830,25.782)
N6: (14.409,20.083,26.065)
N7: (17.162,20.578,24.604)
N9: (17.964,22.699,24.551)
O5': (21.838,22.272,22.206)
O3': (21.884,24.124,26.164)
OP2: (21.933,19.769,22.301)
C3': (20.835,23.570,25.435)
C1': (18.828,23.863,24.287)
C5': (22.047,22.585,23.530)
O4': (19.822,23.486,23.365)
C8: (18.118,21.383,24.201)
O2': (19.812,25.710,25.447)
C6: (15.039,21.246,25.916)
C5: (16.291,21.431,25.271)
C4: (16.781,22.735,25.246)
P: (22.447,20.966,21.593)
C4': (21.120,23.640,23.983)
C2': (19.546,24.329,25.553)
C2: (15.031,23.501,26.371)
N1: (14.444,22.312,26.469)
N3: (16.181,23.830,25.782)
N6: (14.409,20.083,26.065)
N7: (17.162,20.578,24.604)
N9: (17.964,22.699,24.551)
O5': (21.838,22.272,22.206)
O3': (21.884,24.124,26.164)
C4: (16.978,21.652,28.622)
N3: (16.041,22.408,29.253)
OP1: (12.843,14.827,28.686)
OP2: (15.227,15.295,27.879)
C2: (14.855,21.902,29.730)
C1': (13.467,19.947,29.974)
C3': (11.913,18.223,29.721)
O5': (14.309,16.473,29.903)
O4': (13.746,19.039,31.019)
C5': (13.481,16.632,31.021)
P: (14.252,15.171,29.010)
C4': (12.769,17.963,30.974)
C2': (12.792,19.131,28.891)
O2': (12.088,19.966,28.015)
N1: (14.692,20.551,29.544)
O4: (17.978,22.179,28.246)
O2: (14.032,22.607,30.290)
C6: (15.564,19.774,28.904)
C5: (16.694,20.285,28.457)
O3': (10.778,18.954,30.095)
N3: (16.041,22.408,29.253)
OP1: (12.843,14.827,28.686)
OP2: (15.227,15.295,27.879)
C2: (14.855,21.902,29.730)
C1': (13.467,19.947,29.974)
C3': (11.913,18.223,29.721)
O5': (14.309,16.473,29.903)
O4': (13.746,19.039,31.019)
C5': (13.481,16.632,31.021)
P: (14.252,15.171,29.010)
C4': (12.769,17.963,30.974)
C2': (12.792,19.131,28.891)
O2': (12.088,19.966,28.015)
N1: (14.692,20.551,29.544)
O4: (17.978,22.179,28.246)
O2: (14.032,22.607,30.290)
C6: (15.564,19.774,28.904)
C5: (16.694,20.285,28.457)
O3': (10.778,18.954,30.095)
Image (generated by PyMOL):