Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:B41:B40
Extra
PDB:
ATOM 1 O3' U A 40 -109.576 161.338 130.458 1.00113.06 O
ATOM 2 P C A 41 -110.251 161.174 129.012 1.00 97.23 P
ATOM 3 OP1 C A 41 -109.393 160.325 128.162 1.00 82.00 O
ATOM 4 OP2 C A 41 -110.606 162.537 128.538 1.00 87.31 O
ATOM 5 O5' C A 41 -111.578 160.343 129.349 1.00 88.63 O
ATOM 6 C5' C A 41 -112.545 160.209 128.327 1.00 96.31 C
ATOM 7 C4' C A 41 -113.578 159.112 128.551 1.00 92.64 C
ATOM 8 O4' C A 41 -113.015 157.893 129.089 1.00 85.51 O
ATOM 9 C3' C A 41 -114.687 159.351 129.558 1.00 99.07 C
ATOM 10 O3' C A 41 -115.599 160.369 129.145 1.00109.04 O
ATOM 11 C2' C A 41 -115.330 157.975 129.452 1.00 89.12 C
ATOM 12 O2' C A 41 -116.106 157.833 128.286 1.00 84.29 O
ATOM 13 C1' C A 41 -114.126 157.051 129.329 1.00 86.03 C
ATOM 14 N1 C A 41 -113.987 156.212 130.551 1.00 83.73 N
ATOM 15 C2 C A 41 -114.736 155.034 130.630 1.00 79.60 C
ATOM 16 O2 C A 41 -115.461 154.728 129.679 1.00 80.79 O
ATOM 17 N3 C A 41 -114.646 154.256 131.734 1.00 78.83 N
ATOM 18 C4 C A 41 -113.848 154.627 132.736 1.00 79.29 C
ATOM 19 N4 C A 41 -113.780 153.831 133.808 1.00 81.63 N
ATOM 20 C5 C A 41 -113.079 155.827 132.680 1.00 80.19 C
ATOM 21 C6 C A 41 -113.182 156.587 131.583 1.00 81.96 C
ATOM 22 P C A 42 -116.416 161.195 130.249 1.00140.80 P
ATOM 23 OP1 C A 42 -117.134 162.298 129.567 1.00112.81 O
ATOM 24 OP2 C A 42 -115.490 161.463 131.376 1.00117.64 O
ATOM 25 O5' C A 42 -117.499 160.150 130.777 1.00114.66 O
TER
ATOM 1 O3' U B 39 -112.164 159.713 135.749 1.00 97.76 O
ATOM 2 P U B 40 -111.066 158.741 135.099 1.00 96.80 P
ATOM 3 OP1 U B 40 -111.737 157.451 134.862 1.00 98.51 O
ATOM 4 OP2 U B 40 -109.886 158.800 135.987 1.00113.30 O
ATOM 5 O5' U B 40 -110.641 159.388 133.687 1.00111.22 O
ATOM 6 C5' U B 40 -109.870 160.604 133.618 1.00113.08 C
ATOM 7 C4' U B 40 -108.738 160.597 132.599 1.00111.82 C
ATOM 8 O4' U B 40 -107.720 159.642 132.978 1.00111.30 O
ATOM 9 C3' U B 40 -109.065 160.218 131.160 1.00107.98 C
ATOM 10 O3' U B 40 -109.576 161.338 130.458 1.00113.06 O
ATOM 11 C2' U B 40 -107.683 159.873 130.615 1.00106.94 C
ATOM 12 O2' U B 40 -107.056 160.990 130.016 1.00106.83 O
ATOM 13 C1' U B 40 -106.891 159.447 131.849 1.00106.48 C
ATOM 14 N1 U B 40 -106.468 158.029 131.789 1.00111.34 N
ATOM 15 C2 U B 40 -105.534 157.655 130.842 1.00105.93 C
ATOM 16 O2 U B 40 -105.035 158.433 130.044 1.00 97.20 O
ATOM 17 N3 U B 40 -105.204 156.322 130.866 1.00108.12 N
ATOM 18 C4 U B 40 -105.708 155.357 131.720 1.00111.65 C
ATOM 19 O4 U B 40 -105.311 154.203 131.613 1.00 97.60 O
ATOM 20 C5 U B 40 -106.678 155.825 132.681 1.00109.22 C
ATOM 21 C6 U B 40 -107.014 157.121 132.677 1.00105.19 C
ATOM 22 P C B 41 -110.251 161.174 129.012 1.00 97.23 P
ATOM 23 OP1 C B 41 -109.393 160.325 128.162 1.00 82.00 O
ATOM 24 OP2 C B 41 -110.606 162.537 128.538 1.00 87.31 O
ATOM 25 O5' C B 41 -111.578 160.343 129.349 1.00 88.63 O
TER
ATOM 2 P C A 41 -110.251 161.174 129.012 1.00 97.23 P
ATOM 3 OP1 C A 41 -109.393 160.325 128.162 1.00 82.00 O
ATOM 4 OP2 C A 41 -110.606 162.537 128.538 1.00 87.31 O
ATOM 5 O5' C A 41 -111.578 160.343 129.349 1.00 88.63 O
ATOM 6 C5' C A 41 -112.545 160.209 128.327 1.00 96.31 C
ATOM 7 C4' C A 41 -113.578 159.112 128.551 1.00 92.64 C
ATOM 8 O4' C A 41 -113.015 157.893 129.089 1.00 85.51 O
ATOM 9 C3' C A 41 -114.687 159.351 129.558 1.00 99.07 C
ATOM 10 O3' C A 41 -115.599 160.369 129.145 1.00109.04 O
ATOM 11 C2' C A 41 -115.330 157.975 129.452 1.00 89.12 C
ATOM 12 O2' C A 41 -116.106 157.833 128.286 1.00 84.29 O
ATOM 13 C1' C A 41 -114.126 157.051 129.329 1.00 86.03 C
ATOM 14 N1 C A 41 -113.987 156.212 130.551 1.00 83.73 N
ATOM 15 C2 C A 41 -114.736 155.034 130.630 1.00 79.60 C
ATOM 16 O2 C A 41 -115.461 154.728 129.679 1.00 80.79 O
ATOM 17 N3 C A 41 -114.646 154.256 131.734 1.00 78.83 N
ATOM 18 C4 C A 41 -113.848 154.627 132.736 1.00 79.29 C
ATOM 19 N4 C A 41 -113.780 153.831 133.808 1.00 81.63 N
ATOM 20 C5 C A 41 -113.079 155.827 132.680 1.00 80.19 C
ATOM 21 C6 C A 41 -113.182 156.587 131.583 1.00 81.96 C
ATOM 22 P C A 42 -116.416 161.195 130.249 1.00140.80 P
ATOM 23 OP1 C A 42 -117.134 162.298 129.567 1.00112.81 O
ATOM 24 OP2 C A 42 -115.490 161.463 131.376 1.00117.64 O
ATOM 25 O5' C A 42 -117.499 160.150 130.777 1.00114.66 O
TER
ATOM 1 O3' U B 39 -112.164 159.713 135.749 1.00 97.76 O
ATOM 2 P U B 40 -111.066 158.741 135.099 1.00 96.80 P
ATOM 3 OP1 U B 40 -111.737 157.451 134.862 1.00 98.51 O
ATOM 4 OP2 U B 40 -109.886 158.800 135.987 1.00113.30 O
ATOM 5 O5' U B 40 -110.641 159.388 133.687 1.00111.22 O
ATOM 6 C5' U B 40 -109.870 160.604 133.618 1.00113.08 C
ATOM 7 C4' U B 40 -108.738 160.597 132.599 1.00111.82 C
ATOM 8 O4' U B 40 -107.720 159.642 132.978 1.00111.30 O
ATOM 9 C3' U B 40 -109.065 160.218 131.160 1.00107.98 C
ATOM 10 O3' U B 40 -109.576 161.338 130.458 1.00113.06 O
ATOM 11 C2' U B 40 -107.683 159.873 130.615 1.00106.94 C
ATOM 12 O2' U B 40 -107.056 160.990 130.016 1.00106.83 O
ATOM 13 C1' U B 40 -106.891 159.447 131.849 1.00106.48 C
ATOM 14 N1 U B 40 -106.468 158.029 131.789 1.00111.34 N
ATOM 15 C2 U B 40 -105.534 157.655 130.842 1.00105.93 C
ATOM 16 O2 U B 40 -105.035 158.433 130.044 1.00 97.20 O
ATOM 17 N3 U B 40 -105.204 156.322 130.866 1.00108.12 N
ATOM 18 C4 U B 40 -105.708 155.357 131.720 1.00111.65 C
ATOM 19 O4 U B 40 -105.311 154.203 131.613 1.00 97.60 O
ATOM 20 C5 U B 40 -106.678 155.825 132.681 1.00109.22 C
ATOM 21 C6 U B 40 -107.014 157.121 132.677 1.00105.19 C
ATOM 22 P C B 41 -110.251 161.174 129.012 1.00 97.23 P
ATOM 23 OP1 C B 41 -109.393 160.325 128.162 1.00 82.00 O
ATOM 24 OP2 C B 41 -110.606 162.537 128.538 1.00 87.31 O
ATOM 25 O5' C B 41 -111.578 160.343 129.349 1.00 88.63 O
TER
Atoms:
C2: (-114.736,155.034,130.630)
OP1: (-109.393,160.325,128.162)
OP2: (-110.606,162.537,128.538)
C4: (-113.848,154.627,132.736)
O5': (-111.578,160.343,129.349)
C3': (-114.687,159.351,129.558)
C1': (-114.126,157.051,129.329)
O4': (-113.015,157.893,129.089)
C5': (-112.545,160.209,128.327)
P: (-110.251,161.174,129.012)
O2: (-115.461,154.728,129.679)
C4': (-113.578,159.112,128.551)
C2': (-115.330,157.975,129.452)
O2': (-116.106,157.833,128.286)
N1: (-113.987,156.212,130.551)
N3: (-114.646,154.256,131.734)
N4: (-113.780,153.831,133.808)
C6: (-113.182,156.587,131.583)
C5: (-113.079,155.827,132.680)
O3': (-115.599,160.369,129.145)
OP1: (-109.393,160.325,128.162)
OP2: (-110.606,162.537,128.538)
C4: (-113.848,154.627,132.736)
O5': (-111.578,160.343,129.349)
C3': (-114.687,159.351,129.558)
C1': (-114.126,157.051,129.329)
O4': (-113.015,157.893,129.089)
C5': (-112.545,160.209,128.327)
P: (-110.251,161.174,129.012)
O2: (-115.461,154.728,129.679)
C4': (-113.578,159.112,128.551)
C2': (-115.330,157.975,129.452)
O2': (-116.106,157.833,128.286)
N1: (-113.987,156.212,130.551)
N3: (-114.646,154.256,131.734)
N4: (-113.780,153.831,133.808)
C6: (-113.182,156.587,131.583)
C5: (-113.079,155.827,132.680)
O3': (-115.599,160.369,129.145)
C4: (-105.708,155.357,131.720)
N3: (-105.204,156.322,130.866)
OP1: (-111.737,157.451,134.862)
OP2: (-109.886,158.800,135.987)
C2: (-105.534,157.655,130.842)
C1': (-106.891,159.447,131.849)
C3': (-109.065,160.218,131.160)
O5': (-110.641,159.388,133.687)
O4': (-107.720,159.642,132.978)
C5': (-109.870,160.604,133.618)
P: (-111.066,158.741,135.099)
C4': (-108.738,160.597,132.599)
C2': (-107.683,159.873,130.615)
O2': (-107.056,160.990,130.016)
N1: (-106.468,158.029,131.789)
O4: (-105.311,154.203,131.613)
O2: (-105.035,158.433,130.044)
C6: (-107.014,157.121,132.677)
C5: (-106.678,155.825,132.681)
O3': (-109.576,161.338,130.458)
N3: (-105.204,156.322,130.866)
OP1: (-111.737,157.451,134.862)
OP2: (-109.886,158.800,135.987)
C2: (-105.534,157.655,130.842)
C1': (-106.891,159.447,131.849)
C3': (-109.065,160.218,131.160)
O5': (-110.641,159.388,133.687)
O4': (-107.720,159.642,132.978)
C5': (-109.870,160.604,133.618)
P: (-111.066,158.741,135.099)
C4': (-108.738,160.597,132.599)
C2': (-107.683,159.873,130.615)
O2': (-107.056,160.990,130.016)
N1: (-106.468,158.029,131.789)
O4: (-105.311,154.203,131.613)
O2: (-105.035,158.433,130.044)
C6: (-107.014,157.121,132.677)
C5: (-106.678,155.825,132.681)
O3': (-109.576,161.338,130.458)
Image (generated by PyMOL):