ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:B41:B40

Extra

PDB:
ATOM 1 O3' U A 40 -161.292 -19.438 48.867 1.00193.35 O
ATOM 2 P C A 41 -161.931 -17.976 48.772 1.00192.70 P
ATOM 3 OP1 C A 41 -161.065 -17.108 47.942 1.00163.14 O
ATOM 4 OP2 C A 41 -162.250 -17.558 50.153 1.00158.68 O
ATOM 5 O5' C A 41 -163.289 -18.257 47.970 1.00168.54 O
ATOM 6 C5' C A 41 -164.237 -17.207 47.888 1.00172.80 C
ATOM 7 C4' C A 41 -165.283 -17.366 46.795 1.00173.64 C
ATOM 8 O4' C A 41 -164.753 -17.883 45.547 1.00168.44 O
ATOM 9 C3' C A 41 -166.417 -18.348 47.019 1.00172.92 C
ATOM 10 O3' C A 41 -167.281 -17.955 48.081 1.00185.86 O
ATOM 11 C2' C A 41 -167.091 -18.171 45.660 1.00164.80 C
ATOM 12 O2' C A 41 -167.855 -16.986 45.573 1.00159.64 O
ATOM 13 C1' C A 41 -165.895 -18.048 44.718 1.00166.29 C
ATOM 14 N1 C A 41 -165.812 -19.233 43.828 1.00156.17 N
ATOM 15 C2 C A 41 -166.591 -19.238 42.665 1.00150.82 C
ATOM 16 O2 C A 41 -167.300 -18.256 42.415 1.00149.07 O
ATOM 17 N3 C A 41 -166.546 -20.312 41.842 1.00149.52 N
ATOM 18 C4 C A 41 -165.771 -21.346 42.155 1.00150.77 C
ATOM 19 N4 C A 41 -165.761 -22.380 41.310 1.00150.67 N
ATOM 20 C5 C A 41 -164.976 -21.360 43.340 1.00151.19 C
ATOM 21 C6 C A 41 -165.028 -20.297 44.148 1.00153.15 C
ATOM 22 P C A 42 -168.114 -19.067 48.882 1.00227.56 P
ATOM 23 OP1 C A 42 -168.796 -18.420 50.028 1.00208.26 O
ATOM 24 OP2 C A 42 -167.197 -20.205 49.106 1.00196.55 O
ATOM 25 O5' C A 42 -169.234 -19.532 47.839 1.00199.58 O
TER

ATOM 1 O3' U B 39 -164.014 -24.605 47.119 1.00191.25 O
ATOM 2 P U B 40 -162.930 -23.937 46.149 1.00181.75 P
ATOM 3 OP1 U B 40 -163.625 -23.632 44.881 1.00182.44 O
ATOM 4 OP2 U B 40 -161.772 -24.850 46.124 1.00182.20 O
ATOM 5 O5' U B 40 -162.462 -22.560 46.829 1.00188.61 O
ATOM 6 C5' U B 40 -161.667 -22.555 48.019 1.00186.48 C
ATOM 7 C4' U B 40 -160.509 -21.563 48.021 1.00189.98 C
ATOM 8 O4' U B 40 -159.524 -21.922 47.023 1.00188.79 O
ATOM 9 C3' U B 40 -160.813 -20.103 47.709 1.00189.10 C
ATOM 10 O3' U B 40 -161.292 -19.438 48.867 1.00193.35 O
ATOM 11 C2' U B 40 -159.421 -19.579 47.358 1.00184.01 C
ATOM 12 O2' U B 40 -158.757 -19.045 48.487 1.00178.09 O
ATOM 13 C1' U B 40 -158.666 -20.812 46.861 1.00178.38 C
ATOM 14 N1 U B 40 -158.269 -20.709 45.436 1.00183.98 N
ATOM 15 C2 U B 40 -157.320 -19.772 45.075 1.00176.79 C
ATOM 16 O2 U B 40 -156.780 -19.018 45.867 1.00165.29 O
ATOM 17 N3 U B 40 -157.022 -19.750 43.738 1.00181.39 N
ATOM 18 C4 U B 40 -157.570 -20.554 42.755 1.00189.35 C
ATOM 19 O4 U B 40 -157.200 -20.416 41.595 1.00178.52 O
ATOM 20 C5 U B 40 -158.553 -21.506 43.209 1.00178.49 C
ATOM 21 C6 U B 40 -158.860 -21.545 44.509 1.00173.79 C
ATOM 22 P C B 41 -161.931 -17.976 48.772 1.00192.70 P
ATOM 23 OP1 C B 41 -161.065 -17.108 47.942 1.00163.14 O
ATOM 24 OP2 C B 41 -162.250 -17.558 50.153 1.00158.68 O
ATOM 25 O5' C B 41 -163.289 -18.257 47.970 1.00168.54 O
TER

Atoms:
C2: (-166.591,-19.238,42.665)
OP1: (-161.065,-17.108,47.942)
OP2: (-162.250,-17.558,50.153)
C4: (-165.771,-21.346,42.155)
O5': (-163.289,-18.257,47.970)
C3': (-166.417,-18.348,47.019)
C1': (-165.895,-18.048,44.718)
O4': (-164.753,-17.883,45.547)
C5': (-164.237,-17.207,47.888)
P: (-161.931,-17.976,48.772)
O2: (-167.300,-18.256,42.415)
C4': (-165.283,-17.366,46.795)
C2': (-167.091,-18.171,45.660)
O2': (-167.855,-16.986,45.573)
N1: (-165.812,-19.233,43.828)
N3: (-166.546,-20.312,41.842)
N4: (-165.761,-22.380,41.310)
C6: (-165.028,-20.297,44.148)
C5: (-164.976,-21.360,43.340)
O3': (-167.281,-17.955,48.081)
C4: (-157.570,-20.554,42.755)
N3: (-157.022,-19.750,43.738)
OP1: (-163.625,-23.632,44.881)
OP2: (-161.772,-24.850,46.124)
C2: (-157.320,-19.772,45.075)
C1': (-158.666,-20.812,46.861)
C3': (-160.813,-20.103,47.709)
O5': (-162.462,-22.560,46.829)
O4': (-159.524,-21.922,47.023)
C5': (-161.667,-22.555,48.019)
P: (-162.930,-23.937,46.149)
C4': (-160.509,-21.563,48.021)
C2': (-159.421,-19.579,47.358)
O2': (-158.757,-19.045,48.487)
N1: (-158.269,-20.709,45.436)
O4: (-157.200,-20.416,41.595)
O2: (-156.780,-19.018,45.867)
C6: (-158.860,-21.545,44.509)
C5: (-158.553,-21.506,43.209)
O3': (-161.292,-19.438,48.867)
Image (generated by PyMOL):
PyMOL image
show in jmol