Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:R101:R100
Extra
PDB:
ATOM 1 O3' U A 100 12.119 -35.677 61.390 1.00 57.82 O
ATOM 2 P C A 101 12.680 -37.162 61.606 1.00 58.54 P
ATOM 3 OP1 C A 101 11.898 -38.055 60.718 1.00 58.46 O
ATOM 4 OP2 C A 101 12.693 -37.406 63.066 1.00 58.40 O
ATOM 5 O5' C A 101 14.198 -37.113 61.084 1.00 58.91 O
ATOM 6 C5' C A 101 14.507 -37.036 59.689 1.00 60.35 C
ATOM 7 C4' C A 101 16.004 -36.938 59.442 1.00 61.33 C
ATOM 8 O4' C A 101 16.530 -35.729 60.044 1.00 61.43 O
ATOM 9 C3' C A 101 16.841 -38.049 60.059 1.00 62.25 C
ATOM 10 O3' C A 101 16.884 -39.192 59.210 1.00 63.81 O
ATOM 11 C2' C A 101 18.203 -37.384 60.208 1.00 61.75 C
ATOM 12 O2' C A 101 18.917 -37.311 58.990 1.00 62.11 O
ATOM 13 C1' C A 101 17.790 -35.985 60.648 1.00 61.40 C
ATOM 14 N1 C A 101 17.713 -35.782 62.150 1.00 60.98 N
ATOM 15 C2 C A 101 18.885 -35.721 62.933 1.00 60.73 C
ATOM 16 O2 C A 101 20.000 -35.840 62.403 1.00 60.64 O
ATOM 17 N3 C A 101 18.767 -35.532 64.277 1.00 60.47 N
ATOM 18 C4 C A 101 17.561 -35.405 64.842 1.00 60.31 C
ATOM 19 N4 C A 101 17.497 -35.219 66.164 1.00 60.01 N
ATOM 20 C5 C A 101 16.362 -35.464 64.073 1.00 60.43 C
ATOM 21 C6 C A 101 16.488 -35.645 62.752 1.00 60.73 C
ATOM 22 P A A 102 16.597 -40.635 59.838 1.00 65.15 P
ATOM 23 OP1 A A 102 16.632 -41.613 58.727 1.00 65.54 O
ATOM 24 OP2 A A 102 15.391 -40.551 60.694 1.00 64.84 O
ATOM 25 O5' A A 102 17.873 -40.868 60.779 1.00 65.45 O
TER
ATOM 1 O3' A B 99 12.174 -32.973 67.190 1.00 54.41 O
ATOM 2 P U B 100 12.773 -34.346 66.610 1.00 54.89 P
ATOM 3 OP1 U B 100 11.767 -35.405 66.852 1.00 54.38 O
ATOM 4 OP2 U B 100 14.136 -34.498 67.165 1.00 54.64 O
ATOM 5 O5' U B 100 12.882 -34.102 65.023 1.00 55.23 O
ATOM 6 C5' U B 100 11.720 -34.146 64.178 1.00 55.68 C
ATOM 7 C4' U B 100 11.986 -33.655 62.759 1.00 56.11 C
ATOM 8 O4' U B 100 12.730 -32.405 62.744 1.00 56.12 O
ATOM 9 C3' U B 100 12.846 -34.558 61.888 1.00 56.79 C
ATOM 10 O3' U B 100 12.119 -35.677 61.390 1.00 57.82 O
ATOM 11 C2' U B 100 13.218 -33.592 60.769 1.00 56.46 C
ATOM 12 O2' U B 100 12.164 -33.363 59.851 1.00 56.83 O
ATOM 13 C1' U B 100 13.526 -32.326 61.569 1.00 55.94 C
ATOM 14 N1 U B 100 14.984 -32.202 61.936 1.00 55.64 N
ATOM 15 C2 U B 100 15.964 -32.150 60.948 1.00 55.64 C
ATOM 16 O2 U B 100 15.741 -32.192 59.749 1.00 55.93 O
ATOM 17 N3 U B 100 17.254 -32.044 61.417 1.00 55.37 N
ATOM 18 C4 U B 100 17.661 -31.990 62.740 1.00 55.41 C
ATOM 19 O4 U B 100 18.853 -31.898 63.008 1.00 55.62 O
ATOM 20 C5 U B 100 16.597 -32.048 63.709 1.00 55.17 C
ATOM 21 C6 U B 100 15.332 -32.152 63.277 1.00 55.45 C
ATOM 22 P C B 101 12.680 -37.162 61.606 1.00 58.54 P
ATOM 23 OP1 C B 101 11.898 -38.055 60.718 1.00 58.46 O
ATOM 24 OP2 C B 101 12.693 -37.406 63.066 1.00 58.40 O
ATOM 25 O5' C B 101 14.198 -37.113 61.084 1.00 58.91 O
TER
ATOM 2 P C A 101 12.680 -37.162 61.606 1.00 58.54 P
ATOM 3 OP1 C A 101 11.898 -38.055 60.718 1.00 58.46 O
ATOM 4 OP2 C A 101 12.693 -37.406 63.066 1.00 58.40 O
ATOM 5 O5' C A 101 14.198 -37.113 61.084 1.00 58.91 O
ATOM 6 C5' C A 101 14.507 -37.036 59.689 1.00 60.35 C
ATOM 7 C4' C A 101 16.004 -36.938 59.442 1.00 61.33 C
ATOM 8 O4' C A 101 16.530 -35.729 60.044 1.00 61.43 O
ATOM 9 C3' C A 101 16.841 -38.049 60.059 1.00 62.25 C
ATOM 10 O3' C A 101 16.884 -39.192 59.210 1.00 63.81 O
ATOM 11 C2' C A 101 18.203 -37.384 60.208 1.00 61.75 C
ATOM 12 O2' C A 101 18.917 -37.311 58.990 1.00 62.11 O
ATOM 13 C1' C A 101 17.790 -35.985 60.648 1.00 61.40 C
ATOM 14 N1 C A 101 17.713 -35.782 62.150 1.00 60.98 N
ATOM 15 C2 C A 101 18.885 -35.721 62.933 1.00 60.73 C
ATOM 16 O2 C A 101 20.000 -35.840 62.403 1.00 60.64 O
ATOM 17 N3 C A 101 18.767 -35.532 64.277 1.00 60.47 N
ATOM 18 C4 C A 101 17.561 -35.405 64.842 1.00 60.31 C
ATOM 19 N4 C A 101 17.497 -35.219 66.164 1.00 60.01 N
ATOM 20 C5 C A 101 16.362 -35.464 64.073 1.00 60.43 C
ATOM 21 C6 C A 101 16.488 -35.645 62.752 1.00 60.73 C
ATOM 22 P A A 102 16.597 -40.635 59.838 1.00 65.15 P
ATOM 23 OP1 A A 102 16.632 -41.613 58.727 1.00 65.54 O
ATOM 24 OP2 A A 102 15.391 -40.551 60.694 1.00 64.84 O
ATOM 25 O5' A A 102 17.873 -40.868 60.779 1.00 65.45 O
TER
ATOM 1 O3' A B 99 12.174 -32.973 67.190 1.00 54.41 O
ATOM 2 P U B 100 12.773 -34.346 66.610 1.00 54.89 P
ATOM 3 OP1 U B 100 11.767 -35.405 66.852 1.00 54.38 O
ATOM 4 OP2 U B 100 14.136 -34.498 67.165 1.00 54.64 O
ATOM 5 O5' U B 100 12.882 -34.102 65.023 1.00 55.23 O
ATOM 6 C5' U B 100 11.720 -34.146 64.178 1.00 55.68 C
ATOM 7 C4' U B 100 11.986 -33.655 62.759 1.00 56.11 C
ATOM 8 O4' U B 100 12.730 -32.405 62.744 1.00 56.12 O
ATOM 9 C3' U B 100 12.846 -34.558 61.888 1.00 56.79 C
ATOM 10 O3' U B 100 12.119 -35.677 61.390 1.00 57.82 O
ATOM 11 C2' U B 100 13.218 -33.592 60.769 1.00 56.46 C
ATOM 12 O2' U B 100 12.164 -33.363 59.851 1.00 56.83 O
ATOM 13 C1' U B 100 13.526 -32.326 61.569 1.00 55.94 C
ATOM 14 N1 U B 100 14.984 -32.202 61.936 1.00 55.64 N
ATOM 15 C2 U B 100 15.964 -32.150 60.948 1.00 55.64 C
ATOM 16 O2 U B 100 15.741 -32.192 59.749 1.00 55.93 O
ATOM 17 N3 U B 100 17.254 -32.044 61.417 1.00 55.37 N
ATOM 18 C4 U B 100 17.661 -31.990 62.740 1.00 55.41 C
ATOM 19 O4 U B 100 18.853 -31.898 63.008 1.00 55.62 O
ATOM 20 C5 U B 100 16.597 -32.048 63.709 1.00 55.17 C
ATOM 21 C6 U B 100 15.332 -32.152 63.277 1.00 55.45 C
ATOM 22 P C B 101 12.680 -37.162 61.606 1.00 58.54 P
ATOM 23 OP1 C B 101 11.898 -38.055 60.718 1.00 58.46 O
ATOM 24 OP2 C B 101 12.693 -37.406 63.066 1.00 58.40 O
ATOM 25 O5' C B 101 14.198 -37.113 61.084 1.00 58.91 O
TER
Atoms:
C2: (18.885,-35.721,62.933)
OP1: (11.898,-38.055,60.718)
OP2: (12.693,-37.406,63.066)
C4: (17.561,-35.405,64.842)
O5': (14.198,-37.113,61.084)
C3': (16.841,-38.049,60.059)
C1': (17.790,-35.985,60.648)
O4': (16.530,-35.729,60.044)
C5': (14.507,-37.036,59.689)
P: (12.680,-37.162,61.606)
O2: (20.000,-35.840,62.403)
C4': (16.004,-36.938,59.442)
C2': (18.203,-37.384,60.208)
O2': (18.917,-37.311,58.990)
N1: (17.713,-35.782,62.150)
N3: (18.767,-35.532,64.277)
N4: (17.497,-35.219,66.164)
C6: (16.488,-35.645,62.752)
C5: (16.362,-35.464,64.073)
O3': (16.884,-39.192,59.210)
OP1: (11.898,-38.055,60.718)
OP2: (12.693,-37.406,63.066)
C4: (17.561,-35.405,64.842)
O5': (14.198,-37.113,61.084)
C3': (16.841,-38.049,60.059)
C1': (17.790,-35.985,60.648)
O4': (16.530,-35.729,60.044)
C5': (14.507,-37.036,59.689)
P: (12.680,-37.162,61.606)
O2: (20.000,-35.840,62.403)
C4': (16.004,-36.938,59.442)
C2': (18.203,-37.384,60.208)
O2': (18.917,-37.311,58.990)
N1: (17.713,-35.782,62.150)
N3: (18.767,-35.532,64.277)
N4: (17.497,-35.219,66.164)
C6: (16.488,-35.645,62.752)
C5: (16.362,-35.464,64.073)
O3': (16.884,-39.192,59.210)
C4: (17.661,-31.990,62.740)
N3: (17.254,-32.044,61.417)
OP1: (11.767,-35.405,66.852)
OP2: (14.136,-34.498,67.165)
C2: (15.964,-32.150,60.948)
C1': (13.526,-32.326,61.569)
C3': (12.846,-34.558,61.888)
O5': (12.882,-34.102,65.023)
O4': (12.730,-32.405,62.744)
C5': (11.720,-34.146,64.178)
P: (12.773,-34.346,66.610)
C4': (11.986,-33.655,62.759)
C2': (13.218,-33.592,60.769)
O2': (12.164,-33.363,59.851)
N1: (14.984,-32.202,61.936)
O4: (18.853,-31.898,63.008)
O2: (15.741,-32.192,59.749)
C6: (15.332,-32.152,63.277)
C5: (16.597,-32.048,63.709)
O3': (12.119,-35.677,61.390)
N3: (17.254,-32.044,61.417)
OP1: (11.767,-35.405,66.852)
OP2: (14.136,-34.498,67.165)
C2: (15.964,-32.150,60.948)
C1': (13.526,-32.326,61.569)
C3': (12.846,-34.558,61.888)
O5': (12.882,-34.102,65.023)
O4': (12.730,-32.405,62.744)
C5': (11.720,-34.146,64.178)
P: (12.773,-34.346,66.610)
C4': (11.986,-33.655,62.759)
C2': (13.218,-33.592,60.769)
O2': (12.164,-33.363,59.851)
N1: (14.984,-32.202,61.936)
O4: (18.853,-31.898,63.008)
O2: (15.741,-32.192,59.749)
C6: (15.332,-32.152,63.277)
C5: (16.597,-32.048,63.709)
O3': (12.119,-35.677,61.390)
Image (generated by PyMOL):