Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:B41:B40
Extra
PDB:
ATOM 1 O3' U A 40 160.412 -19.462 -47.614 1.00 83.94 O
ATOM 2 P C A 41 161.024 -17.990 -47.430 1.00 86.08 P
ATOM 3 OP1 C A 41 160.098 -17.160 -46.603 1.00 88.93 O
ATOM 4 OP2 C A 41 161.373 -17.544 -48.798 1.00 81.48 O
ATOM 5 O5' C A 41 162.374 -18.194 -46.600 1.00 84.99 O
ATOM 6 C5' C A 41 163.134 -17.040 -46.242 1.00 83.30 C
ATOM 7 C4' C A 41 164.403 -17.376 -45.473 1.00 84.01 C
ATOM 8 O4' C A 41 164.154 -17.757 -44.095 1.00 83.86 O
ATOM 9 C3' C A 41 165.380 -18.426 -45.960 1.00 81.87 C
ATOM 10 O3' C A 41 166.102 -17.939 -47.099 1.00 88.51 O
ATOM 11 C2' C A 41 166.290 -18.598 -44.728 1.00 78.66 C
ATOM 12 O2' C A 41 167.338 -17.661 -44.639 1.00 83.50 O
ATOM 13 C1' C A 41 165.360 -18.267 -43.563 1.00 78.16 C
ATOM 14 N1 C A 41 165.119 -19.408 -42.656 1.00 78.94 N
ATOM 15 C2 C A 41 165.781 -19.409 -41.420 1.00 83.02 C
ATOM 16 O2 C A 41 166.512 -18.449 -41.125 1.00 81.16 O
ATOM 17 N3 C A 41 165.618 -20.456 -40.581 1.00 79.89 N
ATOM 18 C4 C A 41 164.841 -21.478 -40.934 1.00 75.88 C
ATOM 19 N4 C A 41 164.733 -22.498 -40.082 1.00 79.50 N
ATOM 20 C5 C A 41 164.143 -21.500 -42.176 1.00 76.05 C
ATOM 21 C6 C A 41 164.306 -20.451 -43.000 1.00 77.07 C
ATOM 22 P C A 42 167.231 -18.852 -47.804 1.00 81.55 P
ATOM 23 OP1 C A 42 167.886 -18.080 -48.900 1.00 67.84 O
ATOM 24 OP2 C A 42 166.668 -20.206 -48.064 1.00 79.75 O
ATOM 25 O5' C A 42 168.314 -18.990 -46.659 1.00 82.96 O
TER
ATOM 1 O3' U B 39 162.673 -24.934 -46.282 1.00 70.01 O
ATOM 2 P U B 40 161.952 -24.061 -45.140 1.00 79.10 P
ATOM 3 OP1 U B 40 162.893 -23.812 -44.024 1.00 69.99 O
ATOM 4 OP2 U B 40 160.691 -24.777 -44.869 1.00 91.29 O
ATOM 5 O5' U B 40 161.537 -22.673 -45.822 1.00 84.58 O
ATOM 6 C5' U B 40 160.705 -22.642 -46.988 1.00 85.09 C
ATOM 7 C4' U B 40 159.584 -21.612 -46.853 1.00 91.83 C
ATOM 8 O4' U B 40 158.608 -22.007 -45.849 1.00 89.95 O
ATOM 9 C3' U B 40 159.927 -20.175 -46.483 1.00 89.27 C
ATOM 10 O3' U B 40 160.412 -19.462 -47.614 1.00 83.94 O
ATOM 11 C2' U B 40 158.582 -19.619 -45.990 1.00 88.37 C
ATOM 12 O2' U B 40 157.755 -19.106 -47.023 1.00 79.69 O
ATOM 13 C1' U B 40 157.916 -20.857 -45.376 1.00 90.51 C
ATOM 14 N1 U B 40 157.893 -20.867 -43.902 1.00 93.98 N
ATOM 15 C2 U B 40 156.748 -20.382 -43.242 1.00 91.76 C
ATOM 16 O2 U B 40 155.754 -19.961 -43.827 1.00 82.84 O
ATOM 17 N3 U B 40 156.817 -20.418 -41.866 1.00 94.36 N
ATOM 18 C4 U B 40 157.881 -20.877 -41.083 1.00 92.02 C
ATOM 19 O4 U B 40 157.804 -20.819 -39.846 1.00 83.41 O
ATOM 20 C5 U B 40 159.008 -21.361 -41.830 1.00 92.02 C
ATOM 21 C6 U B 40 158.978 -21.339 -43.175 1.00 91.19 C
ATOM 22 P C B 41 161.024 -17.990 -47.430 1.00 86.08 P
ATOM 23 OP1 C B 41 160.098 -17.160 -46.603 1.00 88.93 O
ATOM 24 OP2 C B 41 161.373 -17.544 -48.798 1.00 81.48 O
ATOM 25 O5' C B 41 162.374 -18.194 -46.600 1.00 84.99 O
TER
ATOM 2 P C A 41 161.024 -17.990 -47.430 1.00 86.08 P
ATOM 3 OP1 C A 41 160.098 -17.160 -46.603 1.00 88.93 O
ATOM 4 OP2 C A 41 161.373 -17.544 -48.798 1.00 81.48 O
ATOM 5 O5' C A 41 162.374 -18.194 -46.600 1.00 84.99 O
ATOM 6 C5' C A 41 163.134 -17.040 -46.242 1.00 83.30 C
ATOM 7 C4' C A 41 164.403 -17.376 -45.473 1.00 84.01 C
ATOM 8 O4' C A 41 164.154 -17.757 -44.095 1.00 83.86 O
ATOM 9 C3' C A 41 165.380 -18.426 -45.960 1.00 81.87 C
ATOM 10 O3' C A 41 166.102 -17.939 -47.099 1.00 88.51 O
ATOM 11 C2' C A 41 166.290 -18.598 -44.728 1.00 78.66 C
ATOM 12 O2' C A 41 167.338 -17.661 -44.639 1.00 83.50 O
ATOM 13 C1' C A 41 165.360 -18.267 -43.563 1.00 78.16 C
ATOM 14 N1 C A 41 165.119 -19.408 -42.656 1.00 78.94 N
ATOM 15 C2 C A 41 165.781 -19.409 -41.420 1.00 83.02 C
ATOM 16 O2 C A 41 166.512 -18.449 -41.125 1.00 81.16 O
ATOM 17 N3 C A 41 165.618 -20.456 -40.581 1.00 79.89 N
ATOM 18 C4 C A 41 164.841 -21.478 -40.934 1.00 75.88 C
ATOM 19 N4 C A 41 164.733 -22.498 -40.082 1.00 79.50 N
ATOM 20 C5 C A 41 164.143 -21.500 -42.176 1.00 76.05 C
ATOM 21 C6 C A 41 164.306 -20.451 -43.000 1.00 77.07 C
ATOM 22 P C A 42 167.231 -18.852 -47.804 1.00 81.55 P
ATOM 23 OP1 C A 42 167.886 -18.080 -48.900 1.00 67.84 O
ATOM 24 OP2 C A 42 166.668 -20.206 -48.064 1.00 79.75 O
ATOM 25 O5' C A 42 168.314 -18.990 -46.659 1.00 82.96 O
TER
ATOM 1 O3' U B 39 162.673 -24.934 -46.282 1.00 70.01 O
ATOM 2 P U B 40 161.952 -24.061 -45.140 1.00 79.10 P
ATOM 3 OP1 U B 40 162.893 -23.812 -44.024 1.00 69.99 O
ATOM 4 OP2 U B 40 160.691 -24.777 -44.869 1.00 91.29 O
ATOM 5 O5' U B 40 161.537 -22.673 -45.822 1.00 84.58 O
ATOM 6 C5' U B 40 160.705 -22.642 -46.988 1.00 85.09 C
ATOM 7 C4' U B 40 159.584 -21.612 -46.853 1.00 91.83 C
ATOM 8 O4' U B 40 158.608 -22.007 -45.849 1.00 89.95 O
ATOM 9 C3' U B 40 159.927 -20.175 -46.483 1.00 89.27 C
ATOM 10 O3' U B 40 160.412 -19.462 -47.614 1.00 83.94 O
ATOM 11 C2' U B 40 158.582 -19.619 -45.990 1.00 88.37 C
ATOM 12 O2' U B 40 157.755 -19.106 -47.023 1.00 79.69 O
ATOM 13 C1' U B 40 157.916 -20.857 -45.376 1.00 90.51 C
ATOM 14 N1 U B 40 157.893 -20.867 -43.902 1.00 93.98 N
ATOM 15 C2 U B 40 156.748 -20.382 -43.242 1.00 91.76 C
ATOM 16 O2 U B 40 155.754 -19.961 -43.827 1.00 82.84 O
ATOM 17 N3 U B 40 156.817 -20.418 -41.866 1.00 94.36 N
ATOM 18 C4 U B 40 157.881 -20.877 -41.083 1.00 92.02 C
ATOM 19 O4 U B 40 157.804 -20.819 -39.846 1.00 83.41 O
ATOM 20 C5 U B 40 159.008 -21.361 -41.830 1.00 92.02 C
ATOM 21 C6 U B 40 158.978 -21.339 -43.175 1.00 91.19 C
ATOM 22 P C B 41 161.024 -17.990 -47.430 1.00 86.08 P
ATOM 23 OP1 C B 41 160.098 -17.160 -46.603 1.00 88.93 O
ATOM 24 OP2 C B 41 161.373 -17.544 -48.798 1.00 81.48 O
ATOM 25 O5' C B 41 162.374 -18.194 -46.600 1.00 84.99 O
TER
Atoms:
C2: (165.781,-19.409,-41.420)
OP1: (160.098,-17.160,-46.603)
OP2: (161.373,-17.544,-48.798)
C4: (164.841,-21.478,-40.934)
O5': (162.374,-18.194,-46.600)
C3': (165.380,-18.426,-45.960)
C1': (165.360,-18.267,-43.563)
O4': (164.154,-17.757,-44.095)
C5': (163.134,-17.040,-46.242)
P: (161.024,-17.990,-47.430)
O2: (166.512,-18.449,-41.125)
C4': (164.403,-17.376,-45.473)
C2': (166.290,-18.598,-44.728)
O2': (167.338,-17.661,-44.639)
N1: (165.119,-19.408,-42.656)
N3: (165.618,-20.456,-40.581)
N4: (164.733,-22.498,-40.082)
C6: (164.306,-20.451,-43.000)
C5: (164.143,-21.500,-42.176)
O3': (166.102,-17.939,-47.099)
OP1: (160.098,-17.160,-46.603)
OP2: (161.373,-17.544,-48.798)
C4: (164.841,-21.478,-40.934)
O5': (162.374,-18.194,-46.600)
C3': (165.380,-18.426,-45.960)
C1': (165.360,-18.267,-43.563)
O4': (164.154,-17.757,-44.095)
C5': (163.134,-17.040,-46.242)
P: (161.024,-17.990,-47.430)
O2: (166.512,-18.449,-41.125)
C4': (164.403,-17.376,-45.473)
C2': (166.290,-18.598,-44.728)
O2': (167.338,-17.661,-44.639)
N1: (165.119,-19.408,-42.656)
N3: (165.618,-20.456,-40.581)
N4: (164.733,-22.498,-40.082)
C6: (164.306,-20.451,-43.000)
C5: (164.143,-21.500,-42.176)
O3': (166.102,-17.939,-47.099)
C4: (157.881,-20.877,-41.083)
N3: (156.817,-20.418,-41.866)
OP1: (162.893,-23.812,-44.024)
OP2: (160.691,-24.777,-44.869)
C2: (156.748,-20.382,-43.242)
C1': (157.916,-20.857,-45.376)
C3': (159.927,-20.175,-46.483)
O5': (161.537,-22.673,-45.822)
O4': (158.608,-22.007,-45.849)
C5': (160.705,-22.642,-46.988)
P: (161.952,-24.061,-45.140)
C4': (159.584,-21.612,-46.853)
C2': (158.582,-19.619,-45.990)
O2': (157.755,-19.106,-47.023)
N1: (157.893,-20.867,-43.902)
O4: (157.804,-20.819,-39.846)
O2: (155.754,-19.961,-43.827)
C6: (158.978,-21.339,-43.175)
C5: (159.008,-21.361,-41.830)
O3': (160.412,-19.462,-47.614)
N3: (156.817,-20.418,-41.866)
OP1: (162.893,-23.812,-44.024)
OP2: (160.691,-24.777,-44.869)
C2: (156.748,-20.382,-43.242)
C1': (157.916,-20.857,-45.376)
C3': (159.927,-20.175,-46.483)
O5': (161.537,-22.673,-45.822)
O4': (158.608,-22.007,-45.849)
C5': (160.705,-22.642,-46.988)
P: (161.952,-24.061,-45.140)
C4': (159.584,-21.612,-46.853)
C2': (158.582,-19.619,-45.990)
O2': (157.755,-19.106,-47.023)
N1: (157.893,-20.867,-43.902)
O4: (157.804,-20.819,-39.846)
O2: (155.754,-19.961,-43.827)
C6: (158.978,-21.339,-43.175)
C5: (159.008,-21.361,-41.830)
O3': (160.412,-19.462,-47.614)
Image (generated by PyMOL):