Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:B41:B40
Extra
PDB:
ATOM 1 O3' U A 40 -2.825-159.833 184.083 1.00110.90 O
ATOM 2 P C A 41 -3.473-159.607 185.545 1.00108.90 P
ATOM 3 OP1 C A 41 -2.409-159.214 186.516 1.00 98.74 O
ATOM 4 OP2 C A 41 -4.287-160.819 185.803 1.00105.70 O
ATOM 5 O5' C A 41 -4.470-158.367 185.408 1.00101.12 O
ATOM 6 C5' C A 41 -5.013-157.778 186.590 1.00 98.84 C
ATOM 7 C4' C A 41 -6.385-157.174 186.350 1.00100.30 C
ATOM 8 O4' C A 41 -6.290-155.792 185.920 1.00100.35 O
ATOM 9 C3' C A 41 -7.326-157.813 185.342 1.00103.95 C
ATOM 10 O3' C A 41 -7.950-159.006 185.829 1.00102.61 O
ATOM 11 C2' C A 41 -8.342-156.692 185.090 1.00103.38 C
ATOM 12 O2' C A 41 -9.410-156.667 186.013 1.00105.32 O
ATOM 13 C1' C A 41 -7.501-155.426 185.278 1.00101.63 C
ATOM 14 N1 C A 41 -7.213-154.726 184.009 1.00103.78 N
ATOM 15 C2 C A 41 -7.674-153.417 183.843 1.00104.71 C
ATOM 16 O2 C A 41 -8.281-152.879 184.766 1.00101.32 O
ATOM 17 N3 C A 41 -7.451-152.772 182.672 1.00106.77 N
ATOM 18 C4 C A 41 -6.800-153.392 181.688 1.00104.97 C
ATOM 19 N4 C A 41 -6.619-152.727 180.542 1.00 95.03 N
ATOM 20 C5 C A 41 -6.307-154.718 181.828 1.00106.21 C
ATOM 21 C6 C A 41 -6.530-155.342 182.998 1.00105.28 C
ATOM 22 P C A 42 -9.013-159.778 184.901 1.00 95.72 P
ATOM 23 OP1 C A 42 -9.409-161.069 185.519 1.00 94.94 O
ATOM 24 OP2 C A 42 -8.463-159.758 183.520 1.00 98.64 O
ATOM 25 O5' C A 42 -10.277-158.824 184.975 1.00 90.81 O
TER
ATOM 1 O3' U B 39 -4.808-158.680 178.696 1.00 94.06 O
ATOM 2 P U B 40 -3.993-157.590 179.535 1.00 89.57 P
ATOM 3 OP1 U B 40 -4.952-156.515 179.894 1.00 93.27 O
ATOM 4 OP2 U B 40 -2.831-157.267 178.667 1.00 92.87 O
ATOM 5 O5' U B 40 -3.491-158.318 180.879 1.00103.90 O
ATOM 6 C5' U B 40 -2.426-159.284 180.866 1.00111.16 C
ATOM 7 C4' U B 40 -1.523-159.149 182.098 1.00110.19 C
ATOM 8 O4' U B 40 -0.470-158.156 181.912 1.00107.34 O
ATOM 9 C3' U B 40 -2.125-158.770 183.449 1.00110.94 C
ATOM 10 O3' U B 40 -2.825-159.833 184.083 1.00110.90 O
ATOM 11 C2' U B 40 -0.893-158.351 184.252 1.00109.78 C
ATOM 12 O2' U B 40 -0.198-159.449 184.803 1.00109.46 O
ATOM 13 C1' U B 40 -0.020-157.695 183.183 1.00107.82 C
ATOM 14 N1 U B 40 -0.076-156.222 183.261 1.00114.23 N
ATOM 15 C2 U B 40 1.096-155.540 183.615 1.00117.32 C
ATOM 16 O2 U B 40 2.163-156.104 183.829 1.00113.47 O
ATOM 17 N3 U B 40 0.971-154.171 183.708 1.00117.39 N
ATOM 18 C4 U B 40 -0.173-153.416 183.490 1.00113.62 C
ATOM 19 O4 U B 40 -0.125-152.183 183.610 1.00106.58 O
ATOM 20 C5 U B 40 -1.331-154.181 183.124 1.00109.94 C
ATOM 21 C6 U B 40 -1.246-155.519 183.021 1.00111.05 C
ATOM 22 P C B 41 -3.473-159.607 185.545 1.00108.90 P
ATOM 23 OP1 C B 41 -2.409-159.214 186.516 1.00 98.74 O
ATOM 24 OP2 C B 41 -4.287-160.819 185.803 1.00105.70 O
ATOM 25 O5' C B 41 -4.470-158.367 185.408 1.00101.12 O
TER
ATOM 2 P C A 41 -3.473-159.607 185.545 1.00108.90 P
ATOM 3 OP1 C A 41 -2.409-159.214 186.516 1.00 98.74 O
ATOM 4 OP2 C A 41 -4.287-160.819 185.803 1.00105.70 O
ATOM 5 O5' C A 41 -4.470-158.367 185.408 1.00101.12 O
ATOM 6 C5' C A 41 -5.013-157.778 186.590 1.00 98.84 C
ATOM 7 C4' C A 41 -6.385-157.174 186.350 1.00100.30 C
ATOM 8 O4' C A 41 -6.290-155.792 185.920 1.00100.35 O
ATOM 9 C3' C A 41 -7.326-157.813 185.342 1.00103.95 C
ATOM 10 O3' C A 41 -7.950-159.006 185.829 1.00102.61 O
ATOM 11 C2' C A 41 -8.342-156.692 185.090 1.00103.38 C
ATOM 12 O2' C A 41 -9.410-156.667 186.013 1.00105.32 O
ATOM 13 C1' C A 41 -7.501-155.426 185.278 1.00101.63 C
ATOM 14 N1 C A 41 -7.213-154.726 184.009 1.00103.78 N
ATOM 15 C2 C A 41 -7.674-153.417 183.843 1.00104.71 C
ATOM 16 O2 C A 41 -8.281-152.879 184.766 1.00101.32 O
ATOM 17 N3 C A 41 -7.451-152.772 182.672 1.00106.77 N
ATOM 18 C4 C A 41 -6.800-153.392 181.688 1.00104.97 C
ATOM 19 N4 C A 41 -6.619-152.727 180.542 1.00 95.03 N
ATOM 20 C5 C A 41 -6.307-154.718 181.828 1.00106.21 C
ATOM 21 C6 C A 41 -6.530-155.342 182.998 1.00105.28 C
ATOM 22 P C A 42 -9.013-159.778 184.901 1.00 95.72 P
ATOM 23 OP1 C A 42 -9.409-161.069 185.519 1.00 94.94 O
ATOM 24 OP2 C A 42 -8.463-159.758 183.520 1.00 98.64 O
ATOM 25 O5' C A 42 -10.277-158.824 184.975 1.00 90.81 O
TER
ATOM 1 O3' U B 39 -4.808-158.680 178.696 1.00 94.06 O
ATOM 2 P U B 40 -3.993-157.590 179.535 1.00 89.57 P
ATOM 3 OP1 U B 40 -4.952-156.515 179.894 1.00 93.27 O
ATOM 4 OP2 U B 40 -2.831-157.267 178.667 1.00 92.87 O
ATOM 5 O5' U B 40 -3.491-158.318 180.879 1.00103.90 O
ATOM 6 C5' U B 40 -2.426-159.284 180.866 1.00111.16 C
ATOM 7 C4' U B 40 -1.523-159.149 182.098 1.00110.19 C
ATOM 8 O4' U B 40 -0.470-158.156 181.912 1.00107.34 O
ATOM 9 C3' U B 40 -2.125-158.770 183.449 1.00110.94 C
ATOM 10 O3' U B 40 -2.825-159.833 184.083 1.00110.90 O
ATOM 11 C2' U B 40 -0.893-158.351 184.252 1.00109.78 C
ATOM 12 O2' U B 40 -0.198-159.449 184.803 1.00109.46 O
ATOM 13 C1' U B 40 -0.020-157.695 183.183 1.00107.82 C
ATOM 14 N1 U B 40 -0.076-156.222 183.261 1.00114.23 N
ATOM 15 C2 U B 40 1.096-155.540 183.615 1.00117.32 C
ATOM 16 O2 U B 40 2.163-156.104 183.829 1.00113.47 O
ATOM 17 N3 U B 40 0.971-154.171 183.708 1.00117.39 N
ATOM 18 C4 U B 40 -0.173-153.416 183.490 1.00113.62 C
ATOM 19 O4 U B 40 -0.125-152.183 183.610 1.00106.58 O
ATOM 20 C5 U B 40 -1.331-154.181 183.124 1.00109.94 C
ATOM 21 C6 U B 40 -1.246-155.519 183.021 1.00111.05 C
ATOM 22 P C B 41 -3.473-159.607 185.545 1.00108.90 P
ATOM 23 OP1 C B 41 -2.409-159.214 186.516 1.00 98.74 O
ATOM 24 OP2 C B 41 -4.287-160.819 185.803 1.00105.70 O
ATOM 25 O5' C B 41 -4.470-158.367 185.408 1.00101.12 O
TER
Atoms:
C2: (-7.674,-153.417,183.843)
OP1: (-2.409,-159.214,186.516)
OP2: (-4.287,-160.819,185.803)
C4: (-6.800,-153.392,181.688)
O5': (-4.470,-158.367,185.408)
C3': (-7.326,-157.813,185.342)
C1': (-7.501,-155.426,185.278)
O4': (-6.290,-155.792,185.920)
C5': (-5.013,-157.778,186.590)
P: (-3.473,-159.607,185.545)
O2: (-8.281,-152.879,184.766)
C4': (-6.385,-157.174,186.350)
C2': (-8.342,-156.692,185.090)
O2': (-9.410,-156.667,186.013)
N1: (-7.213,-154.726,184.009)
N3: (-7.451,-152.772,182.672)
N4: (-6.619,-152.727,180.542)
C6: (-6.530,-155.342,182.998)
C5: (-6.307,-154.718,181.828)
O3': (-7.950,-159.006,185.829)
OP1: (-2.409,-159.214,186.516)
OP2: (-4.287,-160.819,185.803)
C4: (-6.800,-153.392,181.688)
O5': (-4.470,-158.367,185.408)
C3': (-7.326,-157.813,185.342)
C1': (-7.501,-155.426,185.278)
O4': (-6.290,-155.792,185.920)
C5': (-5.013,-157.778,186.590)
P: (-3.473,-159.607,185.545)
O2: (-8.281,-152.879,184.766)
C4': (-6.385,-157.174,186.350)
C2': (-8.342,-156.692,185.090)
O2': (-9.410,-156.667,186.013)
N1: (-7.213,-154.726,184.009)
N3: (-7.451,-152.772,182.672)
N4: (-6.619,-152.727,180.542)
C6: (-6.530,-155.342,182.998)
C5: (-6.307,-154.718,181.828)
O3': (-7.950,-159.006,185.829)
C4: (-0.173,-153.416,183.490)
N3: (0.971,-154.171,183.708)
OP1: (-4.952,-156.515,179.894)
OP2: (-2.831,-157.267,178.667)
C2: (1.096,-155.540,183.615)
C1': (-0.020,-157.695,183.183)
C3': (-2.125,-158.770,183.449)
O5': (-3.491,-158.318,180.879)
O4': (-0.470,-158.156,181.912)
C5': (-2.426,-159.284,180.866)
P: (-3.993,-157.590,179.535)
C4': (-1.523,-159.149,182.098)
C2': (-0.893,-158.351,184.252)
O2': (-0.198,-159.449,184.803)
N1: (-0.076,-156.222,183.261)
O4: (-0.125,-152.183,183.610)
O2: (2.163,-156.104,183.829)
C6: (-1.246,-155.519,183.021)
C5: (-1.331,-154.181,183.124)
O3': (-2.825,-159.833,184.083)
N3: (0.971,-154.171,183.708)
OP1: (-4.952,-156.515,179.894)
OP2: (-2.831,-157.267,178.667)
C2: (1.096,-155.540,183.615)
C1': (-0.020,-157.695,183.183)
C3': (-2.125,-158.770,183.449)
O5': (-3.491,-158.318,180.879)
O4': (-0.470,-158.156,181.912)
C5': (-2.426,-159.284,180.866)
P: (-3.993,-157.590,179.535)
C4': (-1.523,-159.149,182.098)
C2': (-0.893,-158.351,184.252)
O2': (-0.198,-159.449,184.803)
N1: (-0.076,-156.222,183.261)
O4: (-0.125,-152.183,183.610)
O2: (2.163,-156.104,183.829)
C6: (-1.246,-155.519,183.021)
C5: (-1.331,-154.181,183.124)
O3': (-2.825,-159.833,184.083)
Image (generated by PyMOL):