Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M8:M6
Extra
PDB:
ATOM 1 O3' C A 7 -28.381 26.282-117.476 1.00228.93 O
ATOM 2 P C A 8 -29.507 26.498-116.321 1.00208.90 P
ATOM 3 OP1 C A 8 -29.522 25.325-115.420 1.00212.92 O
ATOM 4 OP2 C A 8 -30.782 26.918-116.935 1.00196.17 O
ATOM 5 O5' C A 8 -28.869 27.660-115.435 1.00205.25 O
ATOM 6 C5' C A 8 -29.571 28.831-115.178 1.00190.55 C
ATOM 7 C4' C A 8 -28.949 29.957-115.974 1.00194.64 C
ATOM 8 O4' C A 8 -29.146 29.798-117.405 1.00195.42 O
ATOM 9 C3' C A 8 -29.630 31.255-115.628 1.00185.06 C
ATOM 10 O3' C A 8 -28.882 31.875-114.634 1.00191.34 O
ATOM 11 C2' C A 8 -29.632 32.042-116.929 1.00186.40 C
ATOM 12 O2' C A 8 -28.467 32.805-117.111 1.00200.29 O
ATOM 13 C1' C A 8 -29.766 30.944-117.975 1.00187.48 C
ATOM 14 N1 C A 8 -31.223 30.683-118.309 1.00175.67 N
ATOM 15 C2 C A 8 -32.086 31.736-118.674 1.00168.26 C
ATOM 16 O2 C A 8 -31.654 32.893-118.741 1.00171.45 O
ATOM 17 N3 C A 8 -33.390 31.469-118.953 1.00160.54 N
ATOM 18 C4 C A 8 -33.844 30.219-118.883 1.00160.90 C
ATOM 19 N4 C A 8 -35.128 29.993-119.167 1.00157.87 N
ATOM 20 C5 C A 8 -33.001 29.137-118.513 1.00167.75 C
ATOM 21 C6 C A 8 -31.721 29.412-118.240 1.00174.84 C
ATOM 22 P C A 9 -29.456 31.933-113.148 1.00184.43 P
ATOM 23 OP1 C A 9 -28.628 31.141-112.216 1.00192.07 O
ATOM 24 OP2 C A 9 -30.858 31.478-113.085 1.00171.00 O
ATOM 25 O5' C A 9 -29.357 33.498-112.804 1.00187.34 O
TER
ATOM 1 O3' G B 5 -35.874 23.562-117.621 1.00230.70 O
ATOM 2 P U B 6 -34.756 24.683-117.405 1.00226.86 P
ATOM 3 OP1 U B 6 -34.351 24.700-115.987 1.00234.11 O
ATOM 4 OP2 U B 6 -35.250 25.937-118.010 1.00220.26 O
ATOM 5 O5' U B 6 -33.513 24.121-118.242 1.00225.08 O
ATOM 6 C5' U B 6 -32.943 22.827-118.022 1.00230.77 C
ATOM 7 C4' U B 6 -32.369 22.221-119.304 1.00227.17 C
ATOM 8 O4' U B 6 -33.136 22.593-120.481 1.00221.20 O
ATOM 9 C3' U B 6 -30.976 22.661-119.742 1.00224.44 C
ATOM 10 O3' U B 6 -29.926 22.194-118.883 1.00230.58 O
ATOM 11 C2' U B 6 -30.914 22.048-121.138 1.00219.92 C
ATOM 12 O2' U B 6 -30.678 20.647-121.095 1.00224.33 O
ATOM 13 C1' U B 6 -32.342 22.311-121.640 1.00216.52 C
ATOM 14 N1 U B 6 -32.605 23.293-122.820 1.00208.76 N
ATOM 15 C2 U B 6 -31.920 23.233-124.033 1.00203.84 C
ATOM 16 O2 U B 6 -31.032 22.456-124.298 1.00205.07 O
ATOM 17 N3 U B 6 -32.300 24.144-124.981 1.00198.31 N
ATOM 18 C4 U B 6 -33.282 25.099-124.860 1.00197.15 C
ATOM 19 O4 U B 6 -33.517 25.858-125.784 1.00193.27 O
ATOM 20 C5 U B 6 -33.967 25.102-123.605 1.00201.38 C
ATOM 21 C6 U B 6 -33.610 24.224-122.662 1.00207.08 C
ATOM 22 P C B 7 -29.495 23.078-117.615 1.00249.27 P
ATOM 23 OP1 C B 7 -29.613 22.243-116.397 1.00251.03 O
ATOM 24 OP2 C B 7 -30.316 24.307-117.695 1.00230.54 O
ATOM 25 O5' C B 7 -27.937 23.401-117.819 1.00263.45 O
TER
ATOM 2 P C A 8 -29.507 26.498-116.321 1.00208.90 P
ATOM 3 OP1 C A 8 -29.522 25.325-115.420 1.00212.92 O
ATOM 4 OP2 C A 8 -30.782 26.918-116.935 1.00196.17 O
ATOM 5 O5' C A 8 -28.869 27.660-115.435 1.00205.25 O
ATOM 6 C5' C A 8 -29.571 28.831-115.178 1.00190.55 C
ATOM 7 C4' C A 8 -28.949 29.957-115.974 1.00194.64 C
ATOM 8 O4' C A 8 -29.146 29.798-117.405 1.00195.42 O
ATOM 9 C3' C A 8 -29.630 31.255-115.628 1.00185.06 C
ATOM 10 O3' C A 8 -28.882 31.875-114.634 1.00191.34 O
ATOM 11 C2' C A 8 -29.632 32.042-116.929 1.00186.40 C
ATOM 12 O2' C A 8 -28.467 32.805-117.111 1.00200.29 O
ATOM 13 C1' C A 8 -29.766 30.944-117.975 1.00187.48 C
ATOM 14 N1 C A 8 -31.223 30.683-118.309 1.00175.67 N
ATOM 15 C2 C A 8 -32.086 31.736-118.674 1.00168.26 C
ATOM 16 O2 C A 8 -31.654 32.893-118.741 1.00171.45 O
ATOM 17 N3 C A 8 -33.390 31.469-118.953 1.00160.54 N
ATOM 18 C4 C A 8 -33.844 30.219-118.883 1.00160.90 C
ATOM 19 N4 C A 8 -35.128 29.993-119.167 1.00157.87 N
ATOM 20 C5 C A 8 -33.001 29.137-118.513 1.00167.75 C
ATOM 21 C6 C A 8 -31.721 29.412-118.240 1.00174.84 C
ATOM 22 P C A 9 -29.456 31.933-113.148 1.00184.43 P
ATOM 23 OP1 C A 9 -28.628 31.141-112.216 1.00192.07 O
ATOM 24 OP2 C A 9 -30.858 31.478-113.085 1.00171.00 O
ATOM 25 O5' C A 9 -29.357 33.498-112.804 1.00187.34 O
TER
ATOM 1 O3' G B 5 -35.874 23.562-117.621 1.00230.70 O
ATOM 2 P U B 6 -34.756 24.683-117.405 1.00226.86 P
ATOM 3 OP1 U B 6 -34.351 24.700-115.987 1.00234.11 O
ATOM 4 OP2 U B 6 -35.250 25.937-118.010 1.00220.26 O
ATOM 5 O5' U B 6 -33.513 24.121-118.242 1.00225.08 O
ATOM 6 C5' U B 6 -32.943 22.827-118.022 1.00230.77 C
ATOM 7 C4' U B 6 -32.369 22.221-119.304 1.00227.17 C
ATOM 8 O4' U B 6 -33.136 22.593-120.481 1.00221.20 O
ATOM 9 C3' U B 6 -30.976 22.661-119.742 1.00224.44 C
ATOM 10 O3' U B 6 -29.926 22.194-118.883 1.00230.58 O
ATOM 11 C2' U B 6 -30.914 22.048-121.138 1.00219.92 C
ATOM 12 O2' U B 6 -30.678 20.647-121.095 1.00224.33 O
ATOM 13 C1' U B 6 -32.342 22.311-121.640 1.00216.52 C
ATOM 14 N1 U B 6 -32.605 23.293-122.820 1.00208.76 N
ATOM 15 C2 U B 6 -31.920 23.233-124.033 1.00203.84 C
ATOM 16 O2 U B 6 -31.032 22.456-124.298 1.00205.07 O
ATOM 17 N3 U B 6 -32.300 24.144-124.981 1.00198.31 N
ATOM 18 C4 U B 6 -33.282 25.099-124.860 1.00197.15 C
ATOM 19 O4 U B 6 -33.517 25.858-125.784 1.00193.27 O
ATOM 20 C5 U B 6 -33.967 25.102-123.605 1.00201.38 C
ATOM 21 C6 U B 6 -33.610 24.224-122.662 1.00207.08 C
ATOM 22 P C B 7 -29.495 23.078-117.615 1.00249.27 P
ATOM 23 OP1 C B 7 -29.613 22.243-116.397 1.00251.03 O
ATOM 24 OP2 C B 7 -30.316 24.307-117.695 1.00230.54 O
ATOM 25 O5' C B 7 -27.937 23.401-117.819 1.00263.45 O
TER
Atoms:
C2: (-32.086,31.736,-118.674)
OP1: (-29.522,25.325,-115.420)
OP2: (-30.782,26.918,-116.935)
C4: (-33.844,30.219,-118.883)
O5': (-28.869,27.660,-115.435)
C3': (-29.630,31.255,-115.628)
C1': (-29.766,30.944,-117.975)
O4': (-29.146,29.798,-117.405)
C5': (-29.571,28.831,-115.178)
P: (-29.507,26.498,-116.321)
O2: (-31.654,32.893,-118.741)
C4': (-28.949,29.957,-115.974)
C2': (-29.632,32.042,-116.929)
O2': (-28.467,32.805,-117.111)
N1: (-31.223,30.683,-118.309)
N3: (-33.390,31.469,-118.953)
N4: (-35.128,29.993,-119.167)
C6: (-31.721,29.412,-118.240)
C5: (-33.001,29.137,-118.513)
O3': (-28.882,31.875,-114.634)
OP1: (-29.522,25.325,-115.420)
OP2: (-30.782,26.918,-116.935)
C4: (-33.844,30.219,-118.883)
O5': (-28.869,27.660,-115.435)
C3': (-29.630,31.255,-115.628)
C1': (-29.766,30.944,-117.975)
O4': (-29.146,29.798,-117.405)
C5': (-29.571,28.831,-115.178)
P: (-29.507,26.498,-116.321)
O2: (-31.654,32.893,-118.741)
C4': (-28.949,29.957,-115.974)
C2': (-29.632,32.042,-116.929)
O2': (-28.467,32.805,-117.111)
N1: (-31.223,30.683,-118.309)
N3: (-33.390,31.469,-118.953)
N4: (-35.128,29.993,-119.167)
C6: (-31.721,29.412,-118.240)
C5: (-33.001,29.137,-118.513)
O3': (-28.882,31.875,-114.634)
C4: (-33.282,25.099,-124.860)
N3: (-32.300,24.144,-124.981)
OP1: (-34.351,24.700,-115.987)
OP2: (-35.250,25.937,-118.010)
C2: (-31.920,23.233,-124.033)
C1': (-32.342,22.311,-121.640)
C3': (-30.976,22.661,-119.742)
O5': (-33.513,24.121,-118.242)
O4': (-33.136,22.593,-120.481)
C5': (-32.943,22.827,-118.022)
P: (-34.756,24.683,-117.405)
C4': (-32.369,22.221,-119.304)
C2': (-30.914,22.048,-121.138)
O2': (-30.678,20.647,-121.095)
N1: (-32.605,23.293,-122.820)
O4: (-33.517,25.858,-125.784)
O2: (-31.032,22.456,-124.298)
C6: (-33.610,24.224,-122.662)
C5: (-33.967,25.102,-123.605)
O3': (-29.926,22.194,-118.883)
N3: (-32.300,24.144,-124.981)
OP1: (-34.351,24.700,-115.987)
OP2: (-35.250,25.937,-118.010)
C2: (-31.920,23.233,-124.033)
C1': (-32.342,22.311,-121.640)
C3': (-30.976,22.661,-119.742)
O5': (-33.513,24.121,-118.242)
O4': (-33.136,22.593,-120.481)
C5': (-32.943,22.827,-118.022)
P: (-34.756,24.683,-117.405)
C4': (-32.369,22.221,-119.304)
C2': (-30.914,22.048,-121.138)
O2': (-30.678,20.647,-121.095)
N1: (-32.605,23.293,-122.820)
O4: (-33.517,25.858,-125.784)
O2: (-31.032,22.456,-124.298)
C6: (-33.610,24.224,-122.662)
C5: (-33.967,25.102,-123.605)
O3': (-29.926,22.194,-118.883)
Image (generated by PyMOL):