Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A107:A106
Extra
PDB:
ATOM 1 O3' U A 106 23.332 -56.799 -53.345 1.00 42.00 O
ATOM 2 P C A 107 23.981 -55.624 -54.197 1.00 35.83 P
ATOM 3 OP1 C A 107 22.910 -54.667 -54.509 1.00 60.51 O
ATOM 4 OP2 C A 107 24.735 -56.254 -55.321 1.00 37.91 O
ATOM 5 O5' C A 107 24.968 -54.982 -53.149 1.00 41.36 O
ATOM 6 C5' C A 107 24.567 -54.811 -51.800 1.00 42.97 C
ATOM 7 C4' C A 107 25.690 -55.122 -50.824 1.00 43.09 C
ATOM 8 O4' C A 107 25.933 -56.547 -50.768 1.00 40.66 O
ATOM 9 C3' C A 107 27.064 -54.554 -51.138 1.00 33.82 C
ATOM 10 O3' C A 107 27.180 -53.175 -50.855 1.00 25.27 O
ATOM 11 C2' C A 107 27.962 -55.419 -50.276 1.00 32.57 C
ATOM 12 O2' C A 107 27.857 -55.009 -48.927 1.00 35.58 O
ATOM 13 C1' C A 107 27.278 -56.774 -50.401 1.00 33.87 C
ATOM 14 N1 C A 107 27.896 -57.630 -51.409 1.00 37.61 N
ATOM 15 C2 C A 107 29.129 -58.203 -51.139 1.00 35.39 C
ATOM 16 O2 C A 107 29.652 -57.913 -50.059 1.00 34.73 O
ATOM 17 N3 C A 107 29.675 -59.035 -52.050 1.00 30.33 N
ATOM 18 C4 C A 107 29.008 -59.293 -53.175 1.00 30.15 C
ATOM 19 N4 C A 107 29.535 -60.099 -54.089 1.00 32.06 N
ATOM 20 C5 C A 107 27.744 -58.731 -53.450 1.00 34.97 C
ATOM 21 C6 C A 107 27.212 -57.925 -52.541 1.00 36.67 C
ATOM 22 P C A 108 28.169 -52.286 -51.735 1.00 29.73 P
ATOM 23 OP1 C A 108 27.967 -50.885 -51.353 1.00 25.72 O
ATOM 24 OP2 C A 108 27.973 -52.678 -53.137 1.00 36.39 O
ATOM 25 O5' C A 108 29.595 -52.786 -51.248 1.00 41.94 O
TER
ATOM 1 O3' G B 105 24.853 -61.229 -57.419 1.00 52.57 O
ATOM 2 P U B 106 25.172 -59.673 -57.391 1.00 48.02 P
ATOM 3 OP1 U B 106 24.353 -59.037 -58.444 1.00 53.10 O
ATOM 4 OP2 U B 106 26.657 -59.541 -57.454 1.00 56.12 O
ATOM 5 O5' U B 106 24.649 -59.227 -55.981 1.00 30.98 O
ATOM 6 C5' U B 106 23.302 -58.902 -55.789 1.00 39.40 C
ATOM 7 C4' U B 106 22.957 -58.946 -54.337 1.00 35.85 C
ATOM 8 O4' U B 106 23.119 -60.286 -53.850 1.00 38.30 O
ATOM 9 C3' U B 106 23.831 -58.101 -53.456 1.00 38.67 C
ATOM 10 O3' U B 106 23.332 -56.799 -53.345 1.00 42.00 O
ATOM 11 C2' U B 106 23.833 -58.838 -52.145 1.00 35.50 C
ATOM 12 O2' U B 106 22.678 -58.508 -51.417 1.00 43.62 O
ATOM 13 C1' U B 106 23.709 -60.281 -52.592 1.00 39.72 C
ATOM 14 N1 U B 106 25.019 -60.996 -52.691 1.00 45.89 N
ATOM 15 C2 U B 106 25.967 -61.029 -51.682 1.00 37.46 C
ATOM 16 O2 U B 106 25.841 -60.434 -50.627 1.00 40.93 O
ATOM 17 N3 U B 106 27.080 -61.791 -51.959 1.00 34.65 N
ATOM 18 C4 U B 106 27.345 -62.542 -53.084 1.00 37.66 C
ATOM 19 O4 U B 106 28.385 -63.194 -53.186 1.00 37.92 O
ATOM 20 C5 U B 106 26.324 -62.474 -54.071 1.00 36.99 C
ATOM 21 C6 U B 106 25.239 -61.736 -53.833 1.00 42.01 C
ATOM 22 P C B 107 23.981 -55.624 -54.197 1.00 35.83 P
ATOM 23 OP1 C B 107 22.910 -54.667 -54.509 1.00 60.51 O
ATOM 24 OP2 C B 107 24.735 -56.254 -55.321 1.00 37.91 O
ATOM 25 O5' C B 107 24.968 -54.982 -53.149 1.00 41.36 O
TER
ATOM 2 P C A 107 23.981 -55.624 -54.197 1.00 35.83 P
ATOM 3 OP1 C A 107 22.910 -54.667 -54.509 1.00 60.51 O
ATOM 4 OP2 C A 107 24.735 -56.254 -55.321 1.00 37.91 O
ATOM 5 O5' C A 107 24.968 -54.982 -53.149 1.00 41.36 O
ATOM 6 C5' C A 107 24.567 -54.811 -51.800 1.00 42.97 C
ATOM 7 C4' C A 107 25.690 -55.122 -50.824 1.00 43.09 C
ATOM 8 O4' C A 107 25.933 -56.547 -50.768 1.00 40.66 O
ATOM 9 C3' C A 107 27.064 -54.554 -51.138 1.00 33.82 C
ATOM 10 O3' C A 107 27.180 -53.175 -50.855 1.00 25.27 O
ATOM 11 C2' C A 107 27.962 -55.419 -50.276 1.00 32.57 C
ATOM 12 O2' C A 107 27.857 -55.009 -48.927 1.00 35.58 O
ATOM 13 C1' C A 107 27.278 -56.774 -50.401 1.00 33.87 C
ATOM 14 N1 C A 107 27.896 -57.630 -51.409 1.00 37.61 N
ATOM 15 C2 C A 107 29.129 -58.203 -51.139 1.00 35.39 C
ATOM 16 O2 C A 107 29.652 -57.913 -50.059 1.00 34.73 O
ATOM 17 N3 C A 107 29.675 -59.035 -52.050 1.00 30.33 N
ATOM 18 C4 C A 107 29.008 -59.293 -53.175 1.00 30.15 C
ATOM 19 N4 C A 107 29.535 -60.099 -54.089 1.00 32.06 N
ATOM 20 C5 C A 107 27.744 -58.731 -53.450 1.00 34.97 C
ATOM 21 C6 C A 107 27.212 -57.925 -52.541 1.00 36.67 C
ATOM 22 P C A 108 28.169 -52.286 -51.735 1.00 29.73 P
ATOM 23 OP1 C A 108 27.967 -50.885 -51.353 1.00 25.72 O
ATOM 24 OP2 C A 108 27.973 -52.678 -53.137 1.00 36.39 O
ATOM 25 O5' C A 108 29.595 -52.786 -51.248 1.00 41.94 O
TER
ATOM 1 O3' G B 105 24.853 -61.229 -57.419 1.00 52.57 O
ATOM 2 P U B 106 25.172 -59.673 -57.391 1.00 48.02 P
ATOM 3 OP1 U B 106 24.353 -59.037 -58.444 1.00 53.10 O
ATOM 4 OP2 U B 106 26.657 -59.541 -57.454 1.00 56.12 O
ATOM 5 O5' U B 106 24.649 -59.227 -55.981 1.00 30.98 O
ATOM 6 C5' U B 106 23.302 -58.902 -55.789 1.00 39.40 C
ATOM 7 C4' U B 106 22.957 -58.946 -54.337 1.00 35.85 C
ATOM 8 O4' U B 106 23.119 -60.286 -53.850 1.00 38.30 O
ATOM 9 C3' U B 106 23.831 -58.101 -53.456 1.00 38.67 C
ATOM 10 O3' U B 106 23.332 -56.799 -53.345 1.00 42.00 O
ATOM 11 C2' U B 106 23.833 -58.838 -52.145 1.00 35.50 C
ATOM 12 O2' U B 106 22.678 -58.508 -51.417 1.00 43.62 O
ATOM 13 C1' U B 106 23.709 -60.281 -52.592 1.00 39.72 C
ATOM 14 N1 U B 106 25.019 -60.996 -52.691 1.00 45.89 N
ATOM 15 C2 U B 106 25.967 -61.029 -51.682 1.00 37.46 C
ATOM 16 O2 U B 106 25.841 -60.434 -50.627 1.00 40.93 O
ATOM 17 N3 U B 106 27.080 -61.791 -51.959 1.00 34.65 N
ATOM 18 C4 U B 106 27.345 -62.542 -53.084 1.00 37.66 C
ATOM 19 O4 U B 106 28.385 -63.194 -53.186 1.00 37.92 O
ATOM 20 C5 U B 106 26.324 -62.474 -54.071 1.00 36.99 C
ATOM 21 C6 U B 106 25.239 -61.736 -53.833 1.00 42.01 C
ATOM 22 P C B 107 23.981 -55.624 -54.197 1.00 35.83 P
ATOM 23 OP1 C B 107 22.910 -54.667 -54.509 1.00 60.51 O
ATOM 24 OP2 C B 107 24.735 -56.254 -55.321 1.00 37.91 O
ATOM 25 O5' C B 107 24.968 -54.982 -53.149 1.00 41.36 O
TER
Atoms:
C2: (29.129,-58.203,-51.139)
OP1: (22.910,-54.667,-54.509)
OP2: (24.735,-56.254,-55.321)
C4: (29.008,-59.293,-53.175)
O5': (24.968,-54.982,-53.149)
C3': (27.064,-54.554,-51.138)
C1': (27.278,-56.774,-50.401)
O4': (25.933,-56.547,-50.768)
C5': (24.567,-54.811,-51.800)
P: (23.981,-55.624,-54.197)
O2: (29.652,-57.913,-50.059)
C4': (25.690,-55.122,-50.824)
C2': (27.962,-55.419,-50.276)
O2': (27.857,-55.009,-48.927)
N1: (27.896,-57.630,-51.409)
N3: (29.675,-59.035,-52.050)
N4: (29.535,-60.099,-54.089)
C6: (27.212,-57.925,-52.541)
C5: (27.744,-58.731,-53.450)
O3': (27.180,-53.175,-50.855)
OP1: (22.910,-54.667,-54.509)
OP2: (24.735,-56.254,-55.321)
C4: (29.008,-59.293,-53.175)
O5': (24.968,-54.982,-53.149)
C3': (27.064,-54.554,-51.138)
C1': (27.278,-56.774,-50.401)
O4': (25.933,-56.547,-50.768)
C5': (24.567,-54.811,-51.800)
P: (23.981,-55.624,-54.197)
O2: (29.652,-57.913,-50.059)
C4': (25.690,-55.122,-50.824)
C2': (27.962,-55.419,-50.276)
O2': (27.857,-55.009,-48.927)
N1: (27.896,-57.630,-51.409)
N3: (29.675,-59.035,-52.050)
N4: (29.535,-60.099,-54.089)
C6: (27.212,-57.925,-52.541)
C5: (27.744,-58.731,-53.450)
O3': (27.180,-53.175,-50.855)
C4: (27.345,-62.542,-53.084)
N3: (27.080,-61.791,-51.959)
OP1: (24.353,-59.037,-58.444)
OP2: (26.657,-59.541,-57.454)
C2: (25.967,-61.029,-51.682)
C1': (23.709,-60.281,-52.592)
C3': (23.831,-58.101,-53.456)
O5': (24.649,-59.227,-55.981)
O4': (23.119,-60.286,-53.850)
C5': (23.302,-58.902,-55.789)
P: (25.172,-59.673,-57.391)
C4': (22.957,-58.946,-54.337)
C2': (23.833,-58.838,-52.145)
O2': (22.678,-58.508,-51.417)
N1: (25.019,-60.996,-52.691)
O4: (28.385,-63.194,-53.186)
O2: (25.841,-60.434,-50.627)
C6: (25.239,-61.736,-53.833)
C5: (26.324,-62.474,-54.071)
O3': (23.332,-56.799,-53.345)
N3: (27.080,-61.791,-51.959)
OP1: (24.353,-59.037,-58.444)
OP2: (26.657,-59.541,-57.454)
C2: (25.967,-61.029,-51.682)
C1': (23.709,-60.281,-52.592)
C3': (23.831,-58.101,-53.456)
O5': (24.649,-59.227,-55.981)
O4': (23.119,-60.286,-53.850)
C5': (23.302,-58.902,-55.789)
P: (25.172,-59.673,-57.391)
C4': (22.957,-58.946,-54.337)
C2': (23.833,-58.838,-52.145)
O2': (22.678,-58.508,-51.417)
N1: (25.019,-60.996,-52.691)
O4: (28.385,-63.194,-53.186)
O2: (25.841,-60.434,-50.627)
C6: (25.239,-61.736,-53.833)
C5: (26.324,-62.474,-54.071)
O3': (23.332,-56.799,-53.345)
Image (generated by PyMOL):