ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A163:A162

Extra

PDB:
ATOM 1 O3' U A 162 30.984 -9.135 88.562 1.00135.44 O
ATOM 2 P C A 163 30.215 -9.913 87.371 1.00123.10 P
ATOM 3 OP1 C A 163 30.212 -9.008 86.189 1.00139.61 O
ATOM 4 OP2 C A 163 28.911 -10.375 87.913 1.00140.31 O
ATOM 5 O5' C A 163 31.164 -11.163 87.097 1.00117.29 O
ATOM 6 C5' C A 163 32.262 -11.071 86.198 1.00124.31 C
ATOM 7 C4' C A 163 32.448 -12.354 85.422 1.00120.38 C
ATOM 8 O4' C A 163 32.735 -13.444 86.340 1.00122.50 O
ATOM 9 C3' C A 163 31.235 -12.826 84.631 1.00110.02 C
ATOM 10 O3' C A 163 31.146 -12.224 83.354 1.00113.08 O
ATOM 11 C2' C A 163 31.418 -14.334 84.582 1.00115.25 C
ATOM 12 O2' C A 163 32.355 -14.694 83.580 1.00113.50 O
ATOM 13 C1' C A 163 32.046 -14.608 85.944 1.00124.23 C
ATOM 14 N1 C A 163 31.026 -14.920 86.970 1.00132.75 N
ATOM 15 C2 C A 163 30.786 -16.250 87.319 1.00135.52 C
ATOM 16 O2 C A 163 31.428 -17.143 86.754 1.00140.37 O
ATOM 17 N3 C A 163 29.857 -16.535 88.259 1.00140.96 N
ATOM 18 C4 C A 163 29.179 -15.550 88.853 1.00137.86 C
ATOM 19 N4 C A 163 28.269 -15.871 89.777 1.00135.39 N
ATOM 20 C5 C A 163 29.403 -14.185 88.522 1.00136.15 C
ATOM 21 C6 C A 163 30.324 -13.923 87.586 1.00135.24 C
ATOM 22 P C A 164 29.756 -11.584 82.854 1.00134.03 P
ATOM 23 OP1 C A 164 30.056 -10.769 81.644 1.00127.06 O
ATOM 24 OP2 C A 164 29.139 -10.915 84.028 1.00131.84 O
ATOM 25 O5' C A 164 28.900 -12.868 82.443 1.00119.34 O
TER

ATOM 1 O3' A B 161 29.489 -12.181 93.149 1.00112.83 O
ATOM 2 P U B 162 28.058 -11.804 92.517 1.00132.94 P
ATOM 3 OP1 U B 162 27.214 -11.287 93.622 1.00154.30 O
ATOM 4 OP2 U B 162 27.590 -12.990 91.761 1.00152.96 O
ATOM 5 O5' U B 162 28.419 -10.617 91.506 1.00137.84 O
ATOM 6 C5' U B 162 29.303 -9.563 91.893 1.00132.39 C
ATOM 7 C4' U B 162 29.886 -8.837 90.699 1.00132.32 C
ATOM 8 O4' U B 162 30.554 -7.627 91.162 1.00126.09 O
ATOM 9 C3' U B 162 30.948 -9.615 89.916 1.00131.38 C
ATOM 10 O3' U B 162 30.984 -9.135 88.562 1.00135.44 O
ATOM 11 C2' U B 162 32.220 -9.176 90.627 1.00131.20 C
ATOM 12 O2' U B 162 33.414 -9.399 89.904 1.00135.51 O
ATOM 13 C1' U B 162 31.925 -7.690 90.812 1.00134.83 C
ATOM 14 N1 U B 162 32.718 -7.032 91.874 1.00140.87 N
ATOM 15 C2 U B 162 33.614 -6.032 91.504 1.00140.77 C
ATOM 16 O2 U B 162 33.791 -5.661 90.355 1.00136.01 O
ATOM 17 N3 U B 162 34.312 -5.461 92.537 1.00139.60 N
ATOM 18 C4 U B 162 34.210 -5.775 93.874 1.00139.99 C
ATOM 19 O4 U B 162 34.913 -5.172 94.687 1.00139.39 O
ATOM 20 C5 U B 162 33.265 -6.810 94.172 1.00139.25 C
ATOM 21 C6 U B 162 32.570 -7.390 93.190 1.00140.48 C
ATOM 22 P C B 163 30.215 -9.913 87.371 1.00123.10 P
ATOM 23 OP1 C B 163 30.212 -9.008 86.189 1.00139.61 O
ATOM 24 OP2 C B 163 28.911 -10.375 87.913 1.00140.31 O
ATOM 25 O5' C B 163 31.164 -11.163 87.097 1.00117.29 O
TER

Atoms:
C2: (30.786,-16.250,87.319)
OP1: (30.212,-9.008,86.189)
OP2: (28.911,-10.375,87.913)
C4: (29.179,-15.550,88.853)
O5': (31.164,-11.163,87.097)
C3': (31.235,-12.826,84.631)
C1': (32.046,-14.608,85.944)
O4': (32.735,-13.444,86.340)
C5': (32.262,-11.071,86.198)
P: (30.215,-9.913,87.371)
O2: (31.428,-17.143,86.754)
C4': (32.448,-12.354,85.422)
C2': (31.418,-14.334,84.582)
O2': (32.355,-14.694,83.580)
N1: (31.026,-14.920,86.970)
N3: (29.857,-16.535,88.259)
N4: (28.269,-15.871,89.777)
C6: (30.324,-13.923,87.586)
C5: (29.403,-14.185,88.522)
O3': (31.146,-12.224,83.354)
C4: (34.210,-5.775,93.874)
N3: (34.312,-5.461,92.537)
OP1: (27.214,-11.287,93.622)
OP2: (27.590,-12.990,91.761)
C2: (33.614,-6.032,91.504)
C1': (31.925,-7.690,90.812)
C3': (30.948,-9.615,89.916)
O5': (28.419,-10.617,91.506)
O4': (30.554,-7.627,91.162)
C5': (29.303,-9.563,91.893)
P: (28.058,-11.804,92.517)
C4': (29.886,-8.837,90.699)
C2': (32.220,-9.176,90.627)
O2': (33.414,-9.399,89.904)
N1: (32.718,-7.032,91.874)
O4: (34.913,-5.172,94.687)
O2: (33.791,-5.661,90.355)
C6: (32.570,-7.390,93.190)
C5: (33.265,-6.810,94.172)
O3': (30.984,-9.135,88.562)
Image (generated by PyMOL):
PyMOL image
show in jmol