Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:341:337
Extra
PDB:
ATOM 1 O3' G A 40 1.202 -91.189 31.953 1.00 80.74 O
ATOM 2 P A A 41 0.792 -91.074 30.413 1.00 77.01 P
ATOM 3 OP1 A A 41 -0.614 -91.501 30.327 1.00 77.70 O
ATOM 4 OP2 A A 41 1.859 -91.833 29.609 1.00 77.54 O
ATOM 5 O5' A A 41 0.886 -89.510 30.143 1.00 76.33 O
ATOM 6 C5' A A 41 0.889 -88.984 28.827 1.00 76.78 C
ATOM 7 C4' A A 41 1.320 -87.539 28.829 1.00 75.92 C
ATOM 8 O4' A A 41 0.353 -86.742 29.565 1.00 75.40 O
ATOM 9 C3' A A 41 2.637 -87.245 29.524 1.00 75.02 C
ATOM 10 O3' A A 41 3.748 -87.476 28.700 1.00 75.27 O
ATOM 11 C2' A A 41 2.493 -85.794 29.908 1.00 74.14 C
ATOM 12 O2' A A 41 2.707 -84.981 28.768 1.00 74.30 O
ATOM 13 C1' A A 41 1.014 -85.727 30.285 1.00 74.33 C
ATOM 14 N9 A A 41 0.798 -85.971 31.723 1.00 73.74 N
ATOM 15 C8 A A 41 0.162 -87.069 32.225 1.00 74.20 C
ATOM 16 N7 A A 41 0.086 -87.097 33.529 1.00 73.56 N
ATOM 17 C5 A A 41 0.717 -85.926 33.941 1.00 72.59 C
ATOM 18 C6 A A 41 0.976 -85.399 35.237 1.00 71.59 C
ATOM 19 N6 A A 41 0.616 -85.970 36.399 1.00 71.38 N
ATOM 20 N1 A A 41 1.643 -84.225 35.286 1.00 70.81 N
ATOM 21 C2 A A 41 2.020 -83.654 34.119 1.00 71.03 C
ATOM 22 N3 A A 41 1.840 -84.054 32.843 1.00 71.93 N
ATOM 23 C4 A A 41 1.167 -85.221 32.824 1.00 72.69 C
ATOM 24 P U A 42 5.082 -88.082 29.329 1.00 65.86 P
ATOM 25 OP1 U A 42 6.096 -88.126 28.249 1.00 66.21 O
ATOM 26 OP2 U A 42 4.703 -89.342 30.032 1.00 66.21 O
ATOM 27 O5' U A 42 5.498 -86.991 30.391 1.00 64.62 O
TER
ATOM 1 O3' G B 36 5.544 -87.307 44.551 1.00 65.47 O
ATOM 2 P U B 37 4.163 -86.690 45.100 1.00 68.57 P
ATOM 3 OP1 U B 37 4.516 -85.552 45.993 1.00 67.52 O
ATOM 4 OP2 U B 37 3.341 -87.827 45.648 1.00 69.11 O
ATOM 5 O5' U B 37 3.465 -86.140 43.791 1.00 69.14 O
ATOM 6 C5' U B 37 2.109 -86.469 43.500 1.00 69.85 C
ATOM 7 C4' U B 37 1.755 -86.080 42.096 1.00 70.44 C
ATOM 8 O4' U B 37 2.054 -87.171 41.203 1.00 71.30 O
ATOM 9 C3' U B 37 0.296 -85.748 41.854 1.00 70.86 C
ATOM 10 O3' U B 37 0.022 -84.391 42.084 1.00 70.21 O
ATOM 11 C2' U B 37 0.057 -86.157 40.411 1.00 71.82 C
ATOM 12 O2' U B 37 0.412 -85.104 39.534 1.00 71.63 O
ATOM 13 C1' U B 37 1.049 -87.298 40.227 1.00 72.14 C
ATOM 14 N1 U B 37 0.424 -88.618 40.391 1.00 72.90 N
ATOM 15 C2 U B 37 -0.434 -89.042 39.437 1.00 73.85 C
ATOM 16 O2 U B 37 -0.719 -88.340 38.488 1.00 74.06 O
ATOM 17 N3 U B 37 -0.932 -90.304 39.654 1.00 74.53 N
ATOM 18 C4 U B 37 -0.642 -91.173 40.700 1.00 74.37 C
ATOM 19 O4 U B 37 -1.170 -92.303 40.769 1.00 75.08 O
ATOM 20 C5 U B 37 0.284 -90.634 41.643 1.00 73.34 C
ATOM 21 C6 U B 37 0.767 -89.415 41.451 1.00 72.67 C
ATOM 22 P C B 38 -1.284 -83.970 42.887 1.00 79.27 P
ATOM 23 OP1 C B 38 -1.539 -82.545 42.574 1.00 78.85 O
ATOM 24 OP2 C B 38 -1.078 -84.379 44.299 1.00 78.74 O
ATOM 25 O5' C B 38 -2.400 -84.874 42.241 1.00 80.35 O
TER
ATOM 2 P A A 41 0.792 -91.074 30.413 1.00 77.01 P
ATOM 3 OP1 A A 41 -0.614 -91.501 30.327 1.00 77.70 O
ATOM 4 OP2 A A 41 1.859 -91.833 29.609 1.00 77.54 O
ATOM 5 O5' A A 41 0.886 -89.510 30.143 1.00 76.33 O
ATOM 6 C5' A A 41 0.889 -88.984 28.827 1.00 76.78 C
ATOM 7 C4' A A 41 1.320 -87.539 28.829 1.00 75.92 C
ATOM 8 O4' A A 41 0.353 -86.742 29.565 1.00 75.40 O
ATOM 9 C3' A A 41 2.637 -87.245 29.524 1.00 75.02 C
ATOM 10 O3' A A 41 3.748 -87.476 28.700 1.00 75.27 O
ATOM 11 C2' A A 41 2.493 -85.794 29.908 1.00 74.14 C
ATOM 12 O2' A A 41 2.707 -84.981 28.768 1.00 74.30 O
ATOM 13 C1' A A 41 1.014 -85.727 30.285 1.00 74.33 C
ATOM 14 N9 A A 41 0.798 -85.971 31.723 1.00 73.74 N
ATOM 15 C8 A A 41 0.162 -87.069 32.225 1.00 74.20 C
ATOM 16 N7 A A 41 0.086 -87.097 33.529 1.00 73.56 N
ATOM 17 C5 A A 41 0.717 -85.926 33.941 1.00 72.59 C
ATOM 18 C6 A A 41 0.976 -85.399 35.237 1.00 71.59 C
ATOM 19 N6 A A 41 0.616 -85.970 36.399 1.00 71.38 N
ATOM 20 N1 A A 41 1.643 -84.225 35.286 1.00 70.81 N
ATOM 21 C2 A A 41 2.020 -83.654 34.119 1.00 71.03 C
ATOM 22 N3 A A 41 1.840 -84.054 32.843 1.00 71.93 N
ATOM 23 C4 A A 41 1.167 -85.221 32.824 1.00 72.69 C
ATOM 24 P U A 42 5.082 -88.082 29.329 1.00 65.86 P
ATOM 25 OP1 U A 42 6.096 -88.126 28.249 1.00 66.21 O
ATOM 26 OP2 U A 42 4.703 -89.342 30.032 1.00 66.21 O
ATOM 27 O5' U A 42 5.498 -86.991 30.391 1.00 64.62 O
TER
ATOM 1 O3' G B 36 5.544 -87.307 44.551 1.00 65.47 O
ATOM 2 P U B 37 4.163 -86.690 45.100 1.00 68.57 P
ATOM 3 OP1 U B 37 4.516 -85.552 45.993 1.00 67.52 O
ATOM 4 OP2 U B 37 3.341 -87.827 45.648 1.00 69.11 O
ATOM 5 O5' U B 37 3.465 -86.140 43.791 1.00 69.14 O
ATOM 6 C5' U B 37 2.109 -86.469 43.500 1.00 69.85 C
ATOM 7 C4' U B 37 1.755 -86.080 42.096 1.00 70.44 C
ATOM 8 O4' U B 37 2.054 -87.171 41.203 1.00 71.30 O
ATOM 9 C3' U B 37 0.296 -85.748 41.854 1.00 70.86 C
ATOM 10 O3' U B 37 0.022 -84.391 42.084 1.00 70.21 O
ATOM 11 C2' U B 37 0.057 -86.157 40.411 1.00 71.82 C
ATOM 12 O2' U B 37 0.412 -85.104 39.534 1.00 71.63 O
ATOM 13 C1' U B 37 1.049 -87.298 40.227 1.00 72.14 C
ATOM 14 N1 U B 37 0.424 -88.618 40.391 1.00 72.90 N
ATOM 15 C2 U B 37 -0.434 -89.042 39.437 1.00 73.85 C
ATOM 16 O2 U B 37 -0.719 -88.340 38.488 1.00 74.06 O
ATOM 17 N3 U B 37 -0.932 -90.304 39.654 1.00 74.53 N
ATOM 18 C4 U B 37 -0.642 -91.173 40.700 1.00 74.37 C
ATOM 19 O4 U B 37 -1.170 -92.303 40.769 1.00 75.08 O
ATOM 20 C5 U B 37 0.284 -90.634 41.643 1.00 73.34 C
ATOM 21 C6 U B 37 0.767 -89.415 41.451 1.00 72.67 C
ATOM 22 P C B 38 -1.284 -83.970 42.887 1.00 79.27 P
ATOM 23 OP1 C B 38 -1.539 -82.545 42.574 1.00 78.85 O
ATOM 24 OP2 C B 38 -1.078 -84.379 44.299 1.00 78.74 O
ATOM 25 O5' C B 38 -2.400 -84.874 42.241 1.00 80.35 O
TER
Atoms:
OP1: (-0.614,-91.501,30.327)
OP2: (1.859,-91.833,29.609)
C3': (2.637,-87.245,29.524)
C1': (1.014,-85.727,30.285)
C5': (0.889,-88.984,28.827)
O4': (0.353,-86.742,29.565)
C8: (0.162,-87.069,32.225)
O2': (2.707,-84.981,28.768)
C6: (0.976,-85.399,35.237)
C5: (0.717,-85.926,33.941)
C4: (1.167,-85.221,32.824)
P: (0.792,-91.074,30.413)
C4': (1.320,-87.539,28.829)
C2': (2.493,-85.794,29.908)
C2: (2.020,-83.654,34.119)
N1: (1.643,-84.225,35.286)
N3: (1.840,-84.054,32.843)
N6: (0.616,-85.970,36.399)
N7: (0.086,-87.097,33.529)
N9: (0.798,-85.971,31.723)
O5': (0.886,-89.510,30.143)
O3': (3.748,-87.476,28.700)
OP2: (1.859,-91.833,29.609)
C3': (2.637,-87.245,29.524)
C1': (1.014,-85.727,30.285)
C5': (0.889,-88.984,28.827)
O4': (0.353,-86.742,29.565)
C8: (0.162,-87.069,32.225)
O2': (2.707,-84.981,28.768)
C6: (0.976,-85.399,35.237)
C5: (0.717,-85.926,33.941)
C4: (1.167,-85.221,32.824)
P: (0.792,-91.074,30.413)
C4': (1.320,-87.539,28.829)
C2': (2.493,-85.794,29.908)
C2: (2.020,-83.654,34.119)
N1: (1.643,-84.225,35.286)
N3: (1.840,-84.054,32.843)
N6: (0.616,-85.970,36.399)
N7: (0.086,-87.097,33.529)
N9: (0.798,-85.971,31.723)
O5': (0.886,-89.510,30.143)
O3': (3.748,-87.476,28.700)
C4: (-0.642,-91.173,40.700)
N3: (-0.932,-90.304,39.654)
OP1: (4.516,-85.552,45.993)
OP2: (3.341,-87.827,45.648)
C2: (-0.434,-89.042,39.437)
C1': (1.049,-87.298,40.227)
C3': (0.296,-85.748,41.854)
O5': (3.465,-86.140,43.791)
O4': (2.054,-87.171,41.203)
C5': (2.109,-86.469,43.500)
P: (4.163,-86.690,45.100)
C4': (1.755,-86.080,42.096)
C2': (0.057,-86.157,40.411)
O2': (0.412,-85.104,39.534)
N1: (0.424,-88.618,40.391)
O4: (-1.170,-92.303,40.769)
O2: (-0.719,-88.340,38.488)
C6: (0.767,-89.415,41.451)
C5: (0.284,-90.634,41.643)
O3': (0.022,-84.391,42.084)
N3: (-0.932,-90.304,39.654)
OP1: (4.516,-85.552,45.993)
OP2: (3.341,-87.827,45.648)
C2: (-0.434,-89.042,39.437)
C1': (1.049,-87.298,40.227)
C3': (0.296,-85.748,41.854)
O5': (3.465,-86.140,43.791)
O4': (2.054,-87.171,41.203)
C5': (2.109,-86.469,43.500)
P: (4.163,-86.690,45.100)
C4': (1.755,-86.080,42.096)
C2': (0.057,-86.157,40.411)
O2': (0.412,-85.104,39.534)
N1: (0.424,-88.618,40.391)
O4: (-1.170,-92.303,40.769)
O2: (-0.719,-88.340,38.488)
C6: (0.767,-89.415,41.451)
C5: (0.284,-90.634,41.643)
O3': (0.022,-84.391,42.084)
Image (generated by PyMOL):