Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B22:B21
Extra
PDB:
ATOM 1 O3' U A 21 -18.143 -30.199 42.334 1.00 79.89 O
ATOM 2 P C A 22 -17.098 -28.982 42.332 1.00 77.96 P
ATOM 3 OP1 C A 22 -17.546 -28.020 41.299 1.00 78.02 O
ATOM 4 OP2 C A 22 -15.730 -29.543 42.266 1.00 77.53 O
ATOM 5 O5' C A 22 -17.270 -28.342 43.791 1.00 76.36 O
ATOM 6 C5' C A 22 -17.834 -27.046 43.988 1.00 73.66 C
ATOM 7 C4' C A 22 -17.434 -26.467 45.335 1.00 71.52 C
ATOM 8 O4' C A 22 -17.708 -27.422 46.398 1.00 70.55 O
ATOM 9 C3' C A 22 -15.952 -26.155 45.489 1.00 69.90 C
ATOM 10 O3' C A 22 -15.627 -24.888 44.930 1.00 68.27 O
ATOM 11 C2' C A 22 -15.804 -26.163 47.005 1.00 70.45 C
ATOM 12 O2' C A 22 -16.267 -24.970 47.608 1.00 71.42 O
ATOM 13 C1' C A 22 -16.709 -27.327 47.402 1.00 70.01 C
ATOM 14 N1 C A 22 -15.979 -28.640 47.561 1.00 68.94 N
ATOM 15 C2 C A 22 -15.208 -28.896 48.713 1.00 68.81 C
ATOM 16 O2 C A 22 -15.120 -28.049 49.609 1.00 68.94 O
ATOM 17 N3 C A 22 -14.566 -30.092 48.822 1.00 68.36 N
ATOM 18 C4 C A 22 -14.661 -31.007 47.854 1.00 67.46 C
ATOM 19 N4 C A 22 -14.010 -32.159 48.015 1.00 66.85 N
ATOM 20 C5 C A 22 -15.432 -30.774 46.677 1.00 67.60 C
ATOM 21 C6 C A 22 -16.063 -29.594 46.580 1.00 68.42 C
ATOM 22 P G A 23 -14.170 -24.647 44.312 1.00 66.79 P
ATOM 23 OP1 G A 23 -14.095 -23.282 43.742 1.00 67.03 O
ATOM 24 OP2 G A 23 -13.820 -25.818 43.477 1.00 65.47 O
ATOM 25 O5' G A 23 -13.270 -24.654 45.627 1.00 67.10 O
TER
ATOM 1 P U B 21 -14.929 -34.111 43.511 1.00 83.38 P
ATOM 2 OP1 U B 21 -14.201 -33.101 42.703 1.00 82.87 O
ATOM 3 OP2 U B 21 -14.880 -34.072 44.995 1.00 82.99 O
ATOM 4 O5' U B 21 -16.471 -34.162 43.063 1.00 83.52 O
ATOM 5 C5' U B 21 -16.992 -33.287 42.051 1.00 82.89 C
ATOM 6 C4' U B 21 -18.258 -32.594 42.527 1.00 82.80 C
ATOM 7 O4' U B 21 -18.959 -33.428 43.478 1.00 83.42 O
ATOM 8 C3' U B 21 -18.038 -31.280 43.264 1.00 82.27 C
ATOM 9 O3' U B 21 -18.143 -30.199 42.334 1.00 79.89 O
ATOM 10 C2' U B 21 -19.162 -31.234 44.308 1.00 83.80 C
ATOM 11 O2' U B 21 -20.117 -30.217 44.029 1.00 84.50 O
ATOM 12 C1' U B 21 -19.849 -32.600 44.203 1.00 84.66 C
ATOM 13 N1 U B 21 -20.162 -33.320 45.509 1.00 86.63 N
ATOM 14 C2 U B 21 -19.255 -33.407 46.576 1.00 87.47 C
ATOM 15 O2 U B 21 -18.136 -32.916 46.591 1.00 87.68 O
ATOM 16 N3 U B 21 -19.712 -34.112 47.671 1.00 88.00 N
ATOM 17 C4 U B 21 -20.948 -34.736 47.812 1.00 88.11 C
ATOM 18 O4 U B 21 -21.216 -35.335 48.851 1.00 88.21 O
ATOM 19 C5 U B 21 -21.827 -34.612 46.670 1.00 87.68 C
ATOM 20 C6 U B 21 -21.409 -33.928 45.594 1.00 87.18 C
ATOM 21 P C B 22 -17.098 -28.982 42.332 1.00 77.96 P
ATOM 22 OP1 C B 22 -17.546 -28.020 41.299 1.00 78.02 O
ATOM 23 OP2 C B 22 -15.730 -29.543 42.266 1.00 77.53 O
ATOM 24 O5' C B 22 -17.270 -28.342 43.791 1.00 76.36 O
TER
ATOM 2 P C A 22 -17.098 -28.982 42.332 1.00 77.96 P
ATOM 3 OP1 C A 22 -17.546 -28.020 41.299 1.00 78.02 O
ATOM 4 OP2 C A 22 -15.730 -29.543 42.266 1.00 77.53 O
ATOM 5 O5' C A 22 -17.270 -28.342 43.791 1.00 76.36 O
ATOM 6 C5' C A 22 -17.834 -27.046 43.988 1.00 73.66 C
ATOM 7 C4' C A 22 -17.434 -26.467 45.335 1.00 71.52 C
ATOM 8 O4' C A 22 -17.708 -27.422 46.398 1.00 70.55 O
ATOM 9 C3' C A 22 -15.952 -26.155 45.489 1.00 69.90 C
ATOM 10 O3' C A 22 -15.627 -24.888 44.930 1.00 68.27 O
ATOM 11 C2' C A 22 -15.804 -26.163 47.005 1.00 70.45 C
ATOM 12 O2' C A 22 -16.267 -24.970 47.608 1.00 71.42 O
ATOM 13 C1' C A 22 -16.709 -27.327 47.402 1.00 70.01 C
ATOM 14 N1 C A 22 -15.979 -28.640 47.561 1.00 68.94 N
ATOM 15 C2 C A 22 -15.208 -28.896 48.713 1.00 68.81 C
ATOM 16 O2 C A 22 -15.120 -28.049 49.609 1.00 68.94 O
ATOM 17 N3 C A 22 -14.566 -30.092 48.822 1.00 68.36 N
ATOM 18 C4 C A 22 -14.661 -31.007 47.854 1.00 67.46 C
ATOM 19 N4 C A 22 -14.010 -32.159 48.015 1.00 66.85 N
ATOM 20 C5 C A 22 -15.432 -30.774 46.677 1.00 67.60 C
ATOM 21 C6 C A 22 -16.063 -29.594 46.580 1.00 68.42 C
ATOM 22 P G A 23 -14.170 -24.647 44.312 1.00 66.79 P
ATOM 23 OP1 G A 23 -14.095 -23.282 43.742 1.00 67.03 O
ATOM 24 OP2 G A 23 -13.820 -25.818 43.477 1.00 65.47 O
ATOM 25 O5' G A 23 -13.270 -24.654 45.627 1.00 67.10 O
TER
ATOM 1 P U B 21 -14.929 -34.111 43.511 1.00 83.38 P
ATOM 2 OP1 U B 21 -14.201 -33.101 42.703 1.00 82.87 O
ATOM 3 OP2 U B 21 -14.880 -34.072 44.995 1.00 82.99 O
ATOM 4 O5' U B 21 -16.471 -34.162 43.063 1.00 83.52 O
ATOM 5 C5' U B 21 -16.992 -33.287 42.051 1.00 82.89 C
ATOM 6 C4' U B 21 -18.258 -32.594 42.527 1.00 82.80 C
ATOM 7 O4' U B 21 -18.959 -33.428 43.478 1.00 83.42 O
ATOM 8 C3' U B 21 -18.038 -31.280 43.264 1.00 82.27 C
ATOM 9 O3' U B 21 -18.143 -30.199 42.334 1.00 79.89 O
ATOM 10 C2' U B 21 -19.162 -31.234 44.308 1.00 83.80 C
ATOM 11 O2' U B 21 -20.117 -30.217 44.029 1.00 84.50 O
ATOM 12 C1' U B 21 -19.849 -32.600 44.203 1.00 84.66 C
ATOM 13 N1 U B 21 -20.162 -33.320 45.509 1.00 86.63 N
ATOM 14 C2 U B 21 -19.255 -33.407 46.576 1.00 87.47 C
ATOM 15 O2 U B 21 -18.136 -32.916 46.591 1.00 87.68 O
ATOM 16 N3 U B 21 -19.712 -34.112 47.671 1.00 88.00 N
ATOM 17 C4 U B 21 -20.948 -34.736 47.812 1.00 88.11 C
ATOM 18 O4 U B 21 -21.216 -35.335 48.851 1.00 88.21 O
ATOM 19 C5 U B 21 -21.827 -34.612 46.670 1.00 87.68 C
ATOM 20 C6 U B 21 -21.409 -33.928 45.594 1.00 87.18 C
ATOM 21 P C B 22 -17.098 -28.982 42.332 1.00 77.96 P
ATOM 22 OP1 C B 22 -17.546 -28.020 41.299 1.00 78.02 O
ATOM 23 OP2 C B 22 -15.730 -29.543 42.266 1.00 77.53 O
ATOM 24 O5' C B 22 -17.270 -28.342 43.791 1.00 76.36 O
TER
Atoms:
C2: (-15.208,-28.896,48.713)
OP1: (-17.546,-28.020,41.299)
OP2: (-15.730,-29.543,42.266)
C4: (-14.661,-31.007,47.854)
O5': (-17.270,-28.342,43.791)
C3': (-15.952,-26.155,45.489)
C1': (-16.709,-27.327,47.402)
O4': (-17.708,-27.422,46.398)
C5': (-17.834,-27.046,43.988)
P: (-17.098,-28.982,42.332)
O2: (-15.120,-28.049,49.609)
C4': (-17.434,-26.467,45.335)
C2': (-15.804,-26.163,47.005)
O2': (-16.267,-24.970,47.608)
N1: (-15.979,-28.640,47.561)
N3: (-14.566,-30.092,48.822)
N4: (-14.010,-32.159,48.015)
C6: (-16.063,-29.594,46.580)
C5: (-15.432,-30.774,46.677)
O3': (-15.627,-24.888,44.930)
OP1: (-17.546,-28.020,41.299)
OP2: (-15.730,-29.543,42.266)
C4: (-14.661,-31.007,47.854)
O5': (-17.270,-28.342,43.791)
C3': (-15.952,-26.155,45.489)
C1': (-16.709,-27.327,47.402)
O4': (-17.708,-27.422,46.398)
C5': (-17.834,-27.046,43.988)
P: (-17.098,-28.982,42.332)
O2: (-15.120,-28.049,49.609)
C4': (-17.434,-26.467,45.335)
C2': (-15.804,-26.163,47.005)
O2': (-16.267,-24.970,47.608)
N1: (-15.979,-28.640,47.561)
N3: (-14.566,-30.092,48.822)
N4: (-14.010,-32.159,48.015)
C6: (-16.063,-29.594,46.580)
C5: (-15.432,-30.774,46.677)
O3': (-15.627,-24.888,44.930)
C4: (-20.948,-34.736,47.812)
N3: (-19.712,-34.112,47.671)
OP1: (-14.201,-33.101,42.703)
OP2: (-14.880,-34.072,44.995)
C2: (-19.255,-33.407,46.576)
C1': (-19.849,-32.600,44.203)
C3': (-18.038,-31.280,43.264)
O5': (-16.471,-34.162,43.063)
O4': (-18.959,-33.428,43.478)
C5': (-16.992,-33.287,42.051)
P: (-14.929,-34.111,43.511)
C4': (-18.258,-32.594,42.527)
C2': (-19.162,-31.234,44.308)
O2': (-20.117,-30.217,44.029)
N1: (-20.162,-33.320,45.509)
O4: (-21.216,-35.335,48.851)
O2: (-18.136,-32.916,46.591)
C6: (-21.409,-33.928,45.594)
C5: (-21.827,-34.612,46.670)
O3': (-18.143,-30.199,42.334)
N3: (-19.712,-34.112,47.671)
OP1: (-14.201,-33.101,42.703)
OP2: (-14.880,-34.072,44.995)
C2: (-19.255,-33.407,46.576)
C1': (-19.849,-32.600,44.203)
C3': (-18.038,-31.280,43.264)
O5': (-16.471,-34.162,43.063)
O4': (-18.959,-33.428,43.478)
C5': (-16.992,-33.287,42.051)
P: (-14.929,-34.111,43.511)
C4': (-18.258,-32.594,42.527)
C2': (-19.162,-31.234,44.308)
O2': (-20.117,-30.217,44.029)
N1: (-20.162,-33.320,45.509)
O4: (-21.216,-35.335,48.851)
O2: (-18.136,-32.916,46.591)
C6: (-21.409,-33.928,45.594)
C5: (-21.827,-34.612,46.670)
O3': (-18.143,-30.199,42.334)
Image (generated by PyMOL):