Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:V60:V59
Extra
PDB:
ATOM 1 O3' U A 59 -115.586 -1.460 43.805 1.00106.94 O
ATOM 2 P C A 60 -114.443 -2.253 44.634 1.00128.51 P
ATOM 3 OP1 C A 60 -113.293 -1.326 44.799 1.00128.51 O
ATOM 4 OP2 C A 60 -114.220 -3.555 43.946 1.00128.51 O
ATOM 5 O5' C A 60 -115.141 -2.505 46.043 1.00128.51 O
ATOM 6 C5' C A 60 -115.751 -1.438 46.761 1.00128.51 C
ATOM 7 C4' C A 60 -116.394 -1.929 48.037 1.00128.51 C
ATOM 8 O4' C A 60 -117.834 -1.710 47.990 1.00128.51 O
ATOM 9 C3' C A 60 -116.269 -3.420 48.319 1.00128.51 C
ATOM 10 O3' C A 60 -115.001 -3.792 48.835 1.00128.51 O
ATOM 11 C2' C A 60 -117.420 -3.658 49.283 1.00128.51 C
ATOM 12 O2' C A 60 -117.097 -3.183 50.581 1.00128.51 O
ATOM 13 C1' C A 60 -118.496 -2.752 48.685 1.00128.51 C
ATOM 14 N1 C A 60 -119.376 -3.484 47.735 1.00125.21 N
ATOM 15 C2 C A 60 -120.357 -4.343 48.249 1.00125.21 C
ATOM 16 O2 C A 60 -120.458 -4.467 49.477 1.00125.21 O
ATOM 17 N3 C A 60 -121.171 -5.021 47.404 1.00125.21 N
ATOM 18 C4 C A 60 -121.037 -4.868 46.089 1.00125.21 C
ATOM 19 N4 C A 60 -121.847 -5.538 45.270 1.00125.21 N
ATOM 20 C5 C A 60 -120.053 -4.007 45.539 1.00125.21 C
ATOM 21 C6 C A 60 -119.252 -3.342 46.380 1.00125.21 C
ATOM 22 P C A 61 -114.573 -5.341 48.873 1.00 99.73 P
ATOM 23 OP1 C A 61 -113.201 -5.409 49.447 1.00 99.73 O
ATOM 24 OP2 C A 61 -114.813 -5.897 47.510 1.00 99.73 O
ATOM 25 O5' C A 61 -115.614 -5.955 49.897 1.00 99.73 O
TER
ATOM 1 O3' U B 58 -119.714 -5.527 40.050 1.00113.23 O
ATOM 2 P U B 59 -119.713 -5.481 41.662 1.00106.94 P
ATOM 3 OP1 U B 59 -119.904 -6.874 42.141 1.00106.94 O
ATOM 4 OP2 U B 59 -120.691 -4.447 42.075 1.00106.94 O
ATOM 5 O5' U B 59 -118.237 -4.996 41.998 1.00106.94 O
ATOM 6 C5' U B 59 -117.990 -4.146 43.106 1.00106.94 C
ATOM 7 C4' U B 59 -117.137 -2.967 42.722 1.00106.94 C
ATOM 8 O4' U B 59 -117.759 -2.282 41.603 1.00106.94 O
ATOM 9 C3' U B 59 -116.937 -1.933 43.821 1.00106.94 C
ATOM 10 O3' U B 59 -115.586 -1.460 43.805 1.00106.94 O
ATOM 11 C2' U B 59 -117.918 -0.805 43.466 1.00106.94 C
ATOM 12 O2' U B 59 -117.478 0.492 43.825 1.00106.94 O
ATOM 13 C1' U B 59 -118.094 -0.946 41.945 1.00106.94 C
ATOM 14 N1 U B 59 -119.500 -0.698 41.475 1.00105.70 N
ATOM 15 C2 U B 59 -120.029 0.589 41.416 1.00105.70 C
ATOM 16 O2 U B 59 -119.395 1.590 41.729 1.00105.70 O
ATOM 17 N3 U B 59 -121.343 0.655 40.972 1.00105.70 N
ATOM 18 C4 U B 59 -122.173 -0.399 40.591 1.00105.70 C
ATOM 19 O4 U B 59 -123.332 -0.201 40.203 1.00105.70 O
ATOM 20 C5 U B 59 -121.562 -1.685 40.677 1.00105.70 C
ATOM 21 C6 U B 59 -120.294 -1.774 41.105 1.00105.70 C
ATOM 22 P C B 60 -114.443 -2.253 44.634 1.00128.51 P
ATOM 23 OP1 C B 60 -113.293 -1.326 44.799 1.00128.51 O
ATOM 24 OP2 C B 60 -114.220 -3.555 43.946 1.00128.51 O
ATOM 25 O5' C B 60 -115.141 -2.505 46.043 1.00128.51 O
TER
ATOM 2 P C A 60 -114.443 -2.253 44.634 1.00128.51 P
ATOM 3 OP1 C A 60 -113.293 -1.326 44.799 1.00128.51 O
ATOM 4 OP2 C A 60 -114.220 -3.555 43.946 1.00128.51 O
ATOM 5 O5' C A 60 -115.141 -2.505 46.043 1.00128.51 O
ATOM 6 C5' C A 60 -115.751 -1.438 46.761 1.00128.51 C
ATOM 7 C4' C A 60 -116.394 -1.929 48.037 1.00128.51 C
ATOM 8 O4' C A 60 -117.834 -1.710 47.990 1.00128.51 O
ATOM 9 C3' C A 60 -116.269 -3.420 48.319 1.00128.51 C
ATOM 10 O3' C A 60 -115.001 -3.792 48.835 1.00128.51 O
ATOM 11 C2' C A 60 -117.420 -3.658 49.283 1.00128.51 C
ATOM 12 O2' C A 60 -117.097 -3.183 50.581 1.00128.51 O
ATOM 13 C1' C A 60 -118.496 -2.752 48.685 1.00128.51 C
ATOM 14 N1 C A 60 -119.376 -3.484 47.735 1.00125.21 N
ATOM 15 C2 C A 60 -120.357 -4.343 48.249 1.00125.21 C
ATOM 16 O2 C A 60 -120.458 -4.467 49.477 1.00125.21 O
ATOM 17 N3 C A 60 -121.171 -5.021 47.404 1.00125.21 N
ATOM 18 C4 C A 60 -121.037 -4.868 46.089 1.00125.21 C
ATOM 19 N4 C A 60 -121.847 -5.538 45.270 1.00125.21 N
ATOM 20 C5 C A 60 -120.053 -4.007 45.539 1.00125.21 C
ATOM 21 C6 C A 60 -119.252 -3.342 46.380 1.00125.21 C
ATOM 22 P C A 61 -114.573 -5.341 48.873 1.00 99.73 P
ATOM 23 OP1 C A 61 -113.201 -5.409 49.447 1.00 99.73 O
ATOM 24 OP2 C A 61 -114.813 -5.897 47.510 1.00 99.73 O
ATOM 25 O5' C A 61 -115.614 -5.955 49.897 1.00 99.73 O
TER
ATOM 1 O3' U B 58 -119.714 -5.527 40.050 1.00113.23 O
ATOM 2 P U B 59 -119.713 -5.481 41.662 1.00106.94 P
ATOM 3 OP1 U B 59 -119.904 -6.874 42.141 1.00106.94 O
ATOM 4 OP2 U B 59 -120.691 -4.447 42.075 1.00106.94 O
ATOM 5 O5' U B 59 -118.237 -4.996 41.998 1.00106.94 O
ATOM 6 C5' U B 59 -117.990 -4.146 43.106 1.00106.94 C
ATOM 7 C4' U B 59 -117.137 -2.967 42.722 1.00106.94 C
ATOM 8 O4' U B 59 -117.759 -2.282 41.603 1.00106.94 O
ATOM 9 C3' U B 59 -116.937 -1.933 43.821 1.00106.94 C
ATOM 10 O3' U B 59 -115.586 -1.460 43.805 1.00106.94 O
ATOM 11 C2' U B 59 -117.918 -0.805 43.466 1.00106.94 C
ATOM 12 O2' U B 59 -117.478 0.492 43.825 1.00106.94 O
ATOM 13 C1' U B 59 -118.094 -0.946 41.945 1.00106.94 C
ATOM 14 N1 U B 59 -119.500 -0.698 41.475 1.00105.70 N
ATOM 15 C2 U B 59 -120.029 0.589 41.416 1.00105.70 C
ATOM 16 O2 U B 59 -119.395 1.590 41.729 1.00105.70 O
ATOM 17 N3 U B 59 -121.343 0.655 40.972 1.00105.70 N
ATOM 18 C4 U B 59 -122.173 -0.399 40.591 1.00105.70 C
ATOM 19 O4 U B 59 -123.332 -0.201 40.203 1.00105.70 O
ATOM 20 C5 U B 59 -121.562 -1.685 40.677 1.00105.70 C
ATOM 21 C6 U B 59 -120.294 -1.774 41.105 1.00105.70 C
ATOM 22 P C B 60 -114.443 -2.253 44.634 1.00128.51 P
ATOM 23 OP1 C B 60 -113.293 -1.326 44.799 1.00128.51 O
ATOM 24 OP2 C B 60 -114.220 -3.555 43.946 1.00128.51 O
ATOM 25 O5' C B 60 -115.141 -2.505 46.043 1.00128.51 O
TER
Atoms:
C2: (-120.357,-4.343,48.249)
OP1: (-113.293,-1.326,44.799)
OP2: (-114.220,-3.555,43.946)
C4: (-121.037,-4.868,46.089)
O5': (-115.141,-2.505,46.043)
C3': (-116.269,-3.420,48.319)
C1': (-118.496,-2.752,48.685)
O4': (-117.834,-1.710,47.990)
C5': (-115.751,-1.438,46.761)
P: (-114.443,-2.253,44.634)
O2: (-120.458,-4.467,49.477)
C4': (-116.394,-1.929,48.037)
C2': (-117.420,-3.658,49.283)
O2': (-117.097,-3.183,50.581)
N1: (-119.376,-3.484,47.735)
N3: (-121.171,-5.021,47.404)
N4: (-121.847,-5.538,45.270)
C6: (-119.252,-3.342,46.380)
C5: (-120.053,-4.007,45.539)
O3': (-115.001,-3.792,48.835)
OP1: (-113.293,-1.326,44.799)
OP2: (-114.220,-3.555,43.946)
C4: (-121.037,-4.868,46.089)
O5': (-115.141,-2.505,46.043)
C3': (-116.269,-3.420,48.319)
C1': (-118.496,-2.752,48.685)
O4': (-117.834,-1.710,47.990)
C5': (-115.751,-1.438,46.761)
P: (-114.443,-2.253,44.634)
O2: (-120.458,-4.467,49.477)
C4': (-116.394,-1.929,48.037)
C2': (-117.420,-3.658,49.283)
O2': (-117.097,-3.183,50.581)
N1: (-119.376,-3.484,47.735)
N3: (-121.171,-5.021,47.404)
N4: (-121.847,-5.538,45.270)
C6: (-119.252,-3.342,46.380)
C5: (-120.053,-4.007,45.539)
O3': (-115.001,-3.792,48.835)
C4: (-122.173,-0.399,40.591)
N3: (-121.343,0.655,40.972)
OP1: (-119.904,-6.874,42.141)
OP2: (-120.691,-4.447,42.075)
C2: (-120.029,0.589,41.416)
C1': (-118.094,-0.946,41.945)
C3': (-116.937,-1.933,43.821)
O5': (-118.237,-4.996,41.998)
O4': (-117.759,-2.282,41.603)
C5': (-117.990,-4.146,43.106)
P: (-119.713,-5.481,41.662)
C4': (-117.137,-2.967,42.722)
C2': (-117.918,-0.805,43.466)
O2': (-117.478,0.492,43.825)
N1: (-119.500,-0.698,41.475)
O4: (-123.332,-0.201,40.203)
O2: (-119.395,1.590,41.729)
C6: (-120.294,-1.774,41.105)
C5: (-121.562,-1.685,40.677)
O3': (-115.586,-1.460,43.805)
N3: (-121.343,0.655,40.972)
OP1: (-119.904,-6.874,42.141)
OP2: (-120.691,-4.447,42.075)
C2: (-120.029,0.589,41.416)
C1': (-118.094,-0.946,41.945)
C3': (-116.937,-1.933,43.821)
O5': (-118.237,-4.996,41.998)
O4': (-117.759,-2.282,41.603)
C5': (-117.990,-4.146,43.106)
P: (-119.713,-5.481,41.662)
C4': (-117.137,-2.967,42.722)
C2': (-117.918,-0.805,43.466)
O2': (-117.478,0.492,43.825)
N1: (-119.500,-0.698,41.475)
O4: (-123.332,-0.201,40.203)
O2: (-119.395,1.590,41.729)
C6: (-120.294,-1.774,41.105)
C5: (-121.562,-1.685,40.677)
O3': (-115.586,-1.460,43.805)
Image (generated by PyMOL):