Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2468:A2467
Extra
PDB:
ATOM 1 O3' U A2467 -120.170 -46.020 -48.151 1.00 26.03 O
ATOM 2 P C A2468 -120.391 -46.334 -46.600 1.00 11.54 P
ATOM 3 OP1 C A2468 -121.840 -46.539 -46.391 1.00 11.54 O
ATOM 4 OP2 C A2468 -119.707 -45.253 -45.830 1.00 11.54 O
ATOM 5 O5' C A2468 -119.607 -47.722 -46.405 1.00 11.54 O
ATOM 6 C5' C A2468 -119.850 -48.844 -47.261 1.00 11.54 C
ATOM 7 C4' C A2468 -118.689 -49.818 -47.251 1.00 11.54 C
ATOM 8 O4' C A2468 -117.558 -49.233 -47.930 1.00 11.54 O
ATOM 9 C3' C A2468 -118.162 -50.201 -45.882 1.00 11.54 C
ATOM 10 O3' C A2468 -118.837 -51.311 -45.361 1.00 11.54 O
ATOM 11 C2' C A2468 -116.681 -50.464 -46.117 1.00 11.54 C
ATOM 12 O2' C A2468 -116.468 -51.784 -46.575 1.00 11.54 O
ATOM 13 C1' C A2468 -116.367 -49.523 -47.251 1.00 11.54 C
ATOM 14 N1 C A2468 -115.789 -48.271 -46.795 1.00 11.42 N
ATOM 15 C2 C A2468 -114.411 -48.285 -46.702 1.00 11.42 C
ATOM 16 O2 C A2468 -113.840 -49.376 -46.932 1.00 11.42 O
ATOM 17 N3 C A2468 -113.801 -47.126 -46.334 1.00 11.42 N
ATOM 18 C4 C A2468 -114.530 -46.030 -46.079 1.00 11.42 C
ATOM 19 N4 C A2468 -113.873 -44.928 -45.726 1.00 11.42 N
ATOM 20 C5 C A2468 -115.949 -46.008 -46.188 1.00 11.42 C
ATOM 21 C6 C A2468 -116.532 -47.150 -46.558 1.00 11.42 C
ATOM 22 P A A2469 -119.810 -51.138 -44.117 1.00 8.19 P
ATOM 23 OP1 A A2469 -120.653 -52.347 -44.082 1.00 8.19 O
ATOM 24 OP2 A A2469 -120.458 -49.812 -44.235 1.00 8.19 O
ATOM 25 O5' A A2469 -118.807 -51.129 -42.885 1.00 8.19 O
TER
ATOM 1 O3' U B2466 -116.243 -40.318 -46.983 1.00 20.39 O
ATOM 2 P U B2467 -117.058 -41.478 -46.248 1.00 26.03 P
ATOM 3 OP1 U B2467 -118.252 -40.845 -45.628 1.00 26.03 O
ATOM 4 OP2 U B2467 -116.099 -42.200 -45.363 1.00 26.03 O
ATOM 5 O5' U B2467 -117.505 -42.405 -47.469 1.00 26.03 O
ATOM 6 C5' U B2467 -118.520 -43.374 -47.301 1.00 26.03 C
ATOM 7 C4' U B2467 -118.857 -44.026 -48.600 1.00 26.03 C
ATOM 8 O4' U B2467 -117.828 -43.724 -49.554 1.00 26.03 O
ATOM 9 C3' U B2467 -118.924 -45.543 -48.585 1.00 26.03 C
ATOM 10 O3' U B2467 -120.170 -46.020 -48.151 1.00 26.03 O
ATOM 11 C2' U B2467 -118.604 -45.937 -50.014 1.00 26.03 C
ATOM 12 O2' U B2467 -119.789 -45.988 -50.792 1.00 26.03 O
ATOM 13 C1' U B2467 -117.737 -44.765 -50.497 1.00 26.03 C
ATOM 14 N1 U B2467 -116.296 -45.118 -50.689 1.00 27.46 N
ATOM 15 C2 U B2467 -115.861 -46.193 -51.489 1.00 27.46 C
ATOM 16 O2 U B2467 -116.601 -47.002 -52.050 1.00 27.46 O
ATOM 17 N3 U B2467 -114.482 -46.324 -51.595 1.00 27.46 N
ATOM 18 C4 U B2467 -113.512 -45.515 -51.030 1.00 27.46 C
ATOM 19 O4 U B2467 -112.308 -45.754 -51.213 1.00 27.46 O
ATOM 20 C5 U B2467 -114.049 -44.442 -50.248 1.00 27.46 C
ATOM 21 C6 U B2467 -115.369 -44.274 -50.122 1.00 27.46 C
ATOM 22 P C B2468 -120.391 -46.334 -46.600 1.00 11.54 P
ATOM 23 OP1 C B2468 -121.840 -46.539 -46.391 1.00 11.54 O
ATOM 24 OP2 C B2468 -119.707 -45.253 -45.830 1.00 11.54 O
ATOM 25 O5' C B2468 -119.607 -47.722 -46.405 1.00 11.54 O
TER
ATOM 2 P C A2468 -120.391 -46.334 -46.600 1.00 11.54 P
ATOM 3 OP1 C A2468 -121.840 -46.539 -46.391 1.00 11.54 O
ATOM 4 OP2 C A2468 -119.707 -45.253 -45.830 1.00 11.54 O
ATOM 5 O5' C A2468 -119.607 -47.722 -46.405 1.00 11.54 O
ATOM 6 C5' C A2468 -119.850 -48.844 -47.261 1.00 11.54 C
ATOM 7 C4' C A2468 -118.689 -49.818 -47.251 1.00 11.54 C
ATOM 8 O4' C A2468 -117.558 -49.233 -47.930 1.00 11.54 O
ATOM 9 C3' C A2468 -118.162 -50.201 -45.882 1.00 11.54 C
ATOM 10 O3' C A2468 -118.837 -51.311 -45.361 1.00 11.54 O
ATOM 11 C2' C A2468 -116.681 -50.464 -46.117 1.00 11.54 C
ATOM 12 O2' C A2468 -116.468 -51.784 -46.575 1.00 11.54 O
ATOM 13 C1' C A2468 -116.367 -49.523 -47.251 1.00 11.54 C
ATOM 14 N1 C A2468 -115.789 -48.271 -46.795 1.00 11.42 N
ATOM 15 C2 C A2468 -114.411 -48.285 -46.702 1.00 11.42 C
ATOM 16 O2 C A2468 -113.840 -49.376 -46.932 1.00 11.42 O
ATOM 17 N3 C A2468 -113.801 -47.126 -46.334 1.00 11.42 N
ATOM 18 C4 C A2468 -114.530 -46.030 -46.079 1.00 11.42 C
ATOM 19 N4 C A2468 -113.873 -44.928 -45.726 1.00 11.42 N
ATOM 20 C5 C A2468 -115.949 -46.008 -46.188 1.00 11.42 C
ATOM 21 C6 C A2468 -116.532 -47.150 -46.558 1.00 11.42 C
ATOM 22 P A A2469 -119.810 -51.138 -44.117 1.00 8.19 P
ATOM 23 OP1 A A2469 -120.653 -52.347 -44.082 1.00 8.19 O
ATOM 24 OP2 A A2469 -120.458 -49.812 -44.235 1.00 8.19 O
ATOM 25 O5' A A2469 -118.807 -51.129 -42.885 1.00 8.19 O
TER
ATOM 1 O3' U B2466 -116.243 -40.318 -46.983 1.00 20.39 O
ATOM 2 P U B2467 -117.058 -41.478 -46.248 1.00 26.03 P
ATOM 3 OP1 U B2467 -118.252 -40.845 -45.628 1.00 26.03 O
ATOM 4 OP2 U B2467 -116.099 -42.200 -45.363 1.00 26.03 O
ATOM 5 O5' U B2467 -117.505 -42.405 -47.469 1.00 26.03 O
ATOM 6 C5' U B2467 -118.520 -43.374 -47.301 1.00 26.03 C
ATOM 7 C4' U B2467 -118.857 -44.026 -48.600 1.00 26.03 C
ATOM 8 O4' U B2467 -117.828 -43.724 -49.554 1.00 26.03 O
ATOM 9 C3' U B2467 -118.924 -45.543 -48.585 1.00 26.03 C
ATOM 10 O3' U B2467 -120.170 -46.020 -48.151 1.00 26.03 O
ATOM 11 C2' U B2467 -118.604 -45.937 -50.014 1.00 26.03 C
ATOM 12 O2' U B2467 -119.789 -45.988 -50.792 1.00 26.03 O
ATOM 13 C1' U B2467 -117.737 -44.765 -50.497 1.00 26.03 C
ATOM 14 N1 U B2467 -116.296 -45.118 -50.689 1.00 27.46 N
ATOM 15 C2 U B2467 -115.861 -46.193 -51.489 1.00 27.46 C
ATOM 16 O2 U B2467 -116.601 -47.002 -52.050 1.00 27.46 O
ATOM 17 N3 U B2467 -114.482 -46.324 -51.595 1.00 27.46 N
ATOM 18 C4 U B2467 -113.512 -45.515 -51.030 1.00 27.46 C
ATOM 19 O4 U B2467 -112.308 -45.754 -51.213 1.00 27.46 O
ATOM 20 C5 U B2467 -114.049 -44.442 -50.248 1.00 27.46 C
ATOM 21 C6 U B2467 -115.369 -44.274 -50.122 1.00 27.46 C
ATOM 22 P C B2468 -120.391 -46.334 -46.600 1.00 11.54 P
ATOM 23 OP1 C B2468 -121.840 -46.539 -46.391 1.00 11.54 O
ATOM 24 OP2 C B2468 -119.707 -45.253 -45.830 1.00 11.54 O
ATOM 25 O5' C B2468 -119.607 -47.722 -46.405 1.00 11.54 O
TER
Atoms:
C2: (-114.411,-48.285,-46.702)
OP1: (-121.840,-46.539,-46.391)
OP2: (-119.707,-45.253,-45.830)
C4: (-114.530,-46.030,-46.079)
O5': (-119.607,-47.722,-46.405)
C3': (-118.162,-50.201,-45.882)
C1': (-116.367,-49.523,-47.251)
O4': (-117.558,-49.233,-47.930)
C5': (-119.850,-48.844,-47.261)
P: (-120.391,-46.334,-46.600)
O2: (-113.840,-49.376,-46.932)
C4': (-118.689,-49.818,-47.251)
C2': (-116.681,-50.464,-46.117)
O2': (-116.468,-51.784,-46.575)
N1: (-115.789,-48.271,-46.795)
N3: (-113.801,-47.126,-46.334)
N4: (-113.873,-44.928,-45.726)
C6: (-116.532,-47.150,-46.558)
C5: (-115.949,-46.008,-46.188)
O3': (-118.837,-51.311,-45.361)
OP1: (-121.840,-46.539,-46.391)
OP2: (-119.707,-45.253,-45.830)
C4: (-114.530,-46.030,-46.079)
O5': (-119.607,-47.722,-46.405)
C3': (-118.162,-50.201,-45.882)
C1': (-116.367,-49.523,-47.251)
O4': (-117.558,-49.233,-47.930)
C5': (-119.850,-48.844,-47.261)
P: (-120.391,-46.334,-46.600)
O2: (-113.840,-49.376,-46.932)
C4': (-118.689,-49.818,-47.251)
C2': (-116.681,-50.464,-46.117)
O2': (-116.468,-51.784,-46.575)
N1: (-115.789,-48.271,-46.795)
N3: (-113.801,-47.126,-46.334)
N4: (-113.873,-44.928,-45.726)
C6: (-116.532,-47.150,-46.558)
C5: (-115.949,-46.008,-46.188)
O3': (-118.837,-51.311,-45.361)
C4: (-113.512,-45.515,-51.030)
N3: (-114.482,-46.324,-51.595)
OP1: (-118.252,-40.845,-45.628)
OP2: (-116.099,-42.200,-45.363)
C2: (-115.861,-46.193,-51.489)
C1': (-117.737,-44.765,-50.497)
C3': (-118.924,-45.543,-48.585)
O5': (-117.505,-42.405,-47.469)
O4': (-117.828,-43.724,-49.554)
C5': (-118.520,-43.374,-47.301)
P: (-117.058,-41.478,-46.248)
C4': (-118.857,-44.026,-48.600)
C2': (-118.604,-45.937,-50.014)
O2': (-119.789,-45.988,-50.792)
N1: (-116.296,-45.118,-50.689)
O4: (-112.308,-45.754,-51.213)
O2: (-116.601,-47.002,-52.050)
C6: (-115.369,-44.274,-50.122)
C5: (-114.049,-44.442,-50.248)
O3': (-120.170,-46.020,-48.151)
N3: (-114.482,-46.324,-51.595)
OP1: (-118.252,-40.845,-45.628)
OP2: (-116.099,-42.200,-45.363)
C2: (-115.861,-46.193,-51.489)
C1': (-117.737,-44.765,-50.497)
C3': (-118.924,-45.543,-48.585)
O5': (-117.505,-42.405,-47.469)
O4': (-117.828,-43.724,-49.554)
C5': (-118.520,-43.374,-47.301)
P: (-117.058,-41.478,-46.248)
C4': (-118.857,-44.026,-48.600)
C2': (-118.604,-45.937,-50.014)
O2': (-119.789,-45.988,-50.792)
N1: (-116.296,-45.118,-50.689)
O4: (-112.308,-45.754,-51.213)
O2: (-116.601,-47.002,-52.050)
C6: (-115.369,-44.274,-50.122)
C5: (-114.049,-44.442,-50.248)
O3': (-120.170,-46.020,-48.151)
Image (generated by PyMOL):