Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B87:B86
Extra
PDB:
ATOM 1 O3' U A 86 -113.243 -78.219 -12.555 1.00 21.77 O
ATOM 2 P C A 87 -112.203 -77.278 -11.776 1.00 12.39 P
ATOM 3 OP1 C A 87 -112.377 -75.918 -12.320 1.00 12.39 O
ATOM 4 OP2 C A 87 -110.871 -77.907 -11.863 1.00 12.39 O
ATOM 5 O5' C A 87 -112.722 -77.350 -10.285 1.00 12.39 O
ATOM 6 C5' C A 87 -113.990 -76.839 -9.924 1.00 12.39 C
ATOM 7 C4' C A 87 -114.077 -76.652 -8.442 1.00 12.39 C
ATOM 8 O4' C A 87 -114.200 -77.947 -7.820 1.00 12.39 O
ATOM 9 C3' C A 87 -112.863 -75.995 -7.821 1.00 12.39 C
ATOM 10 O3' C A 87 -113.267 -75.064 -6.844 1.00 12.39 O
ATOM 11 C2' C A 87 -112.092 -77.139 -7.176 1.00 12.39 C
ATOM 12 O2' C A 87 -111.401 -76.784 -6.003 1.00 12.39 O
ATOM 13 C1' C A 87 -113.168 -78.155 -6.883 1.00 12.39 C
ATOM 14 N1 C A 87 -112.705 -79.542 -7.027 1.00 12.95 N
ATOM 15 C2 C A 87 -112.350 -80.250 -5.890 1.00 12.95 C
ATOM 16 O2 C A 87 -112.441 -79.657 -4.806 1.00 12.95 O
ATOM 17 N3 C A 87 -111.938 -81.550 -6.008 1.00 12.95 N
ATOM 18 C4 C A 87 -111.851 -82.148 -7.220 1.00 12.95 C
ATOM 19 N4 C A 87 -111.437 -83.437 -7.300 1.00 12.95 N
ATOM 20 C5 C A 87 -112.208 -81.415 -8.404 1.00 12.95 C
ATOM 21 C6 C A 87 -112.622 -80.139 -8.256 1.00 12.95 C
ATOM 22 P U A 88 -113.427 -73.530 -7.265 1.00 37.39 P
ATOM 23 OP1 U A 88 -114.072 -73.500 -8.619 1.00 37.39 O
ATOM 24 OP2 U A 88 -112.097 -72.889 -7.087 1.00 37.39 O
ATOM 25 O5' U A 88 -114.428 -73.000 -6.173 1.00 37.39 O
TER
ATOM 1 O3' G B 85 -112.762 -84.422 -12.290 1.00 0.01 O
ATOM 2 P U B 86 -111.505 -83.467 -12.421 1.00 21.77 P
ATOM 3 OP1 U B 86 -110.464 -84.241 -13.094 1.00 21.77 O
ATOM 4 OP2 U B 86 -111.228 -82.920 -11.076 1.00 21.77 O
ATOM 5 O5' U B 86 -112.030 -82.311 -13.373 1.00 21.77 O
ATOM 6 C5' U B 86 -111.234 -81.163 -13.608 1.00 21.77 C
ATOM 7 C4' U B 86 -112.066 -79.925 -13.771 1.00 21.77 C
ATOM 8 O4' U B 86 -112.887 -80.056 -14.953 1.00 21.77 O
ATOM 9 C3' U B 86 -113.042 -79.630 -12.637 1.00 21.77 C
ATOM 10 O3' U B 86 -113.243 -78.219 -12.555 1.00 21.77 O
ATOM 11 C2' U B 86 -114.316 -80.252 -13.164 1.00 21.77 C
ATOM 12 O2' U B 86 -115.502 -79.799 -12.546 1.00 21.77 O
ATOM 13 C1' U B 86 -114.221 -79.792 -14.596 1.00 21.77 C
ATOM 14 N1 U B 86 -115.136 -80.470 -15.534 1.00 23.67 N
ATOM 15 C2 U B 86 -114.863 -80.389 -16.890 1.00 23.67 C
ATOM 16 O2 U B 86 -113.876 -79.839 -17.382 1.00 23.67 O
ATOM 17 N3 U B 86 -115.781 -81.009 -17.691 1.00 23.67 N
ATOM 18 C4 U B 86 -116.927 -81.657 -17.297 1.00 23.67 C
ATOM 19 O4 U B 86 -117.644 -82.157 -18.176 1.00 23.67 O
ATOM 20 C5 U B 86 -117.161 -81.675 -15.885 1.00 23.67 C
ATOM 21 C6 U B 86 -116.277 -81.084 -15.080 1.00 23.67 C
ATOM 22 P C B 87 -112.203 -77.278 -11.776 1.00 12.39 P
ATOM 23 OP1 C B 87 -112.377 -75.918 -12.320 1.00 12.39 O
ATOM 24 OP2 C B 87 -110.871 -77.907 -11.863 1.00 12.39 O
ATOM 25 O5' C B 87 -112.722 -77.350 -10.285 1.00 12.39 O
TER
ATOM 2 P C A 87 -112.203 -77.278 -11.776 1.00 12.39 P
ATOM 3 OP1 C A 87 -112.377 -75.918 -12.320 1.00 12.39 O
ATOM 4 OP2 C A 87 -110.871 -77.907 -11.863 1.00 12.39 O
ATOM 5 O5' C A 87 -112.722 -77.350 -10.285 1.00 12.39 O
ATOM 6 C5' C A 87 -113.990 -76.839 -9.924 1.00 12.39 C
ATOM 7 C4' C A 87 -114.077 -76.652 -8.442 1.00 12.39 C
ATOM 8 O4' C A 87 -114.200 -77.947 -7.820 1.00 12.39 O
ATOM 9 C3' C A 87 -112.863 -75.995 -7.821 1.00 12.39 C
ATOM 10 O3' C A 87 -113.267 -75.064 -6.844 1.00 12.39 O
ATOM 11 C2' C A 87 -112.092 -77.139 -7.176 1.00 12.39 C
ATOM 12 O2' C A 87 -111.401 -76.784 -6.003 1.00 12.39 O
ATOM 13 C1' C A 87 -113.168 -78.155 -6.883 1.00 12.39 C
ATOM 14 N1 C A 87 -112.705 -79.542 -7.027 1.00 12.95 N
ATOM 15 C2 C A 87 -112.350 -80.250 -5.890 1.00 12.95 C
ATOM 16 O2 C A 87 -112.441 -79.657 -4.806 1.00 12.95 O
ATOM 17 N3 C A 87 -111.938 -81.550 -6.008 1.00 12.95 N
ATOM 18 C4 C A 87 -111.851 -82.148 -7.220 1.00 12.95 C
ATOM 19 N4 C A 87 -111.437 -83.437 -7.300 1.00 12.95 N
ATOM 20 C5 C A 87 -112.208 -81.415 -8.404 1.00 12.95 C
ATOM 21 C6 C A 87 -112.622 -80.139 -8.256 1.00 12.95 C
ATOM 22 P U A 88 -113.427 -73.530 -7.265 1.00 37.39 P
ATOM 23 OP1 U A 88 -114.072 -73.500 -8.619 1.00 37.39 O
ATOM 24 OP2 U A 88 -112.097 -72.889 -7.087 1.00 37.39 O
ATOM 25 O5' U A 88 -114.428 -73.000 -6.173 1.00 37.39 O
TER
ATOM 1 O3' G B 85 -112.762 -84.422 -12.290 1.00 0.01 O
ATOM 2 P U B 86 -111.505 -83.467 -12.421 1.00 21.77 P
ATOM 3 OP1 U B 86 -110.464 -84.241 -13.094 1.00 21.77 O
ATOM 4 OP2 U B 86 -111.228 -82.920 -11.076 1.00 21.77 O
ATOM 5 O5' U B 86 -112.030 -82.311 -13.373 1.00 21.77 O
ATOM 6 C5' U B 86 -111.234 -81.163 -13.608 1.00 21.77 C
ATOM 7 C4' U B 86 -112.066 -79.925 -13.771 1.00 21.77 C
ATOM 8 O4' U B 86 -112.887 -80.056 -14.953 1.00 21.77 O
ATOM 9 C3' U B 86 -113.042 -79.630 -12.637 1.00 21.77 C
ATOM 10 O3' U B 86 -113.243 -78.219 -12.555 1.00 21.77 O
ATOM 11 C2' U B 86 -114.316 -80.252 -13.164 1.00 21.77 C
ATOM 12 O2' U B 86 -115.502 -79.799 -12.546 1.00 21.77 O
ATOM 13 C1' U B 86 -114.221 -79.792 -14.596 1.00 21.77 C
ATOM 14 N1 U B 86 -115.136 -80.470 -15.534 1.00 23.67 N
ATOM 15 C2 U B 86 -114.863 -80.389 -16.890 1.00 23.67 C
ATOM 16 O2 U B 86 -113.876 -79.839 -17.382 1.00 23.67 O
ATOM 17 N3 U B 86 -115.781 -81.009 -17.691 1.00 23.67 N
ATOM 18 C4 U B 86 -116.927 -81.657 -17.297 1.00 23.67 C
ATOM 19 O4 U B 86 -117.644 -82.157 -18.176 1.00 23.67 O
ATOM 20 C5 U B 86 -117.161 -81.675 -15.885 1.00 23.67 C
ATOM 21 C6 U B 86 -116.277 -81.084 -15.080 1.00 23.67 C
ATOM 22 P C B 87 -112.203 -77.278 -11.776 1.00 12.39 P
ATOM 23 OP1 C B 87 -112.377 -75.918 -12.320 1.00 12.39 O
ATOM 24 OP2 C B 87 -110.871 -77.907 -11.863 1.00 12.39 O
ATOM 25 O5' C B 87 -112.722 -77.350 -10.285 1.00 12.39 O
TER
Atoms:
C2: (-112.350,-80.250,-5.890)
OP1: (-112.377,-75.918,-12.320)
OP2: (-110.871,-77.907,-11.863)
C4: (-111.851,-82.148,-7.220)
O5': (-112.722,-77.350,-10.285)
C3': (-112.863,-75.995,-7.821)
C1': (-113.168,-78.155,-6.883)
O4': (-114.200,-77.947,-7.820)
C5': (-113.990,-76.839,-9.924)
P: (-112.203,-77.278,-11.776)
O2: (-112.441,-79.657,-4.806)
C4': (-114.077,-76.652,-8.442)
C2': (-112.092,-77.139,-7.176)
O2': (-111.401,-76.784,-6.003)
N1: (-112.705,-79.542,-7.027)
N3: (-111.938,-81.550,-6.008)
N4: (-111.437,-83.437,-7.300)
C6: (-112.622,-80.139,-8.256)
C5: (-112.208,-81.415,-8.404)
O3': (-113.267,-75.064,-6.844)
OP1: (-112.377,-75.918,-12.320)
OP2: (-110.871,-77.907,-11.863)
C4: (-111.851,-82.148,-7.220)
O5': (-112.722,-77.350,-10.285)
C3': (-112.863,-75.995,-7.821)
C1': (-113.168,-78.155,-6.883)
O4': (-114.200,-77.947,-7.820)
C5': (-113.990,-76.839,-9.924)
P: (-112.203,-77.278,-11.776)
O2: (-112.441,-79.657,-4.806)
C4': (-114.077,-76.652,-8.442)
C2': (-112.092,-77.139,-7.176)
O2': (-111.401,-76.784,-6.003)
N1: (-112.705,-79.542,-7.027)
N3: (-111.938,-81.550,-6.008)
N4: (-111.437,-83.437,-7.300)
C6: (-112.622,-80.139,-8.256)
C5: (-112.208,-81.415,-8.404)
O3': (-113.267,-75.064,-6.844)
C4: (-116.927,-81.657,-17.297)
N3: (-115.781,-81.009,-17.691)
OP1: (-110.464,-84.241,-13.094)
OP2: (-111.228,-82.920,-11.076)
C2: (-114.863,-80.389,-16.890)
C1': (-114.221,-79.792,-14.596)
C3': (-113.042,-79.630,-12.637)
O5': (-112.030,-82.311,-13.373)
O4': (-112.887,-80.056,-14.953)
C5': (-111.234,-81.163,-13.608)
P: (-111.505,-83.467,-12.421)
C4': (-112.066,-79.925,-13.771)
C2': (-114.316,-80.252,-13.164)
O2': (-115.502,-79.799,-12.546)
N1: (-115.136,-80.470,-15.534)
O4: (-117.644,-82.157,-18.176)
O2: (-113.876,-79.839,-17.382)
C6: (-116.277,-81.084,-15.080)
C5: (-117.161,-81.675,-15.885)
O3': (-113.243,-78.219,-12.555)
N3: (-115.781,-81.009,-17.691)
OP1: (-110.464,-84.241,-13.094)
OP2: (-111.228,-82.920,-11.076)
C2: (-114.863,-80.389,-16.890)
C1': (-114.221,-79.792,-14.596)
C3': (-113.042,-79.630,-12.637)
O5': (-112.030,-82.311,-13.373)
O4': (-112.887,-80.056,-14.953)
C5': (-111.234,-81.163,-13.608)
P: (-111.505,-83.467,-12.421)
C4': (-112.066,-79.925,-13.771)
C2': (-114.316,-80.252,-13.164)
O2': (-115.502,-79.799,-12.546)
N1: (-115.136,-80.470,-15.534)
O4: (-117.644,-82.157,-18.176)
O2: (-113.876,-79.839,-17.382)
C6: (-116.277,-81.084,-15.080)
C5: (-117.161,-81.675,-15.885)
O3': (-113.243,-78.219,-12.555)
Image (generated by PyMOL):