Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21550:21549
Extra
PDB:
ATOM 1 O3' U A1549 -47.010 -83.951 52.422 1.00 88.98 O
ATOM 2 P C A1550 -47.192 -84.446 53.930 1.00 98.71 P
ATOM 3 OP1 C A1550 -45.859 -84.362 54.585 1.00 98.80 O
ATOM 4 OP2 C A1550 -47.873 -85.759 53.878 1.00 99.34 O
ATOM 5 O5' C A1550 -48.174 -83.341 54.534 1.00 98.29 O
ATOM 6 C5' C A1550 -47.729 -81.992 54.724 1.00 97.68 C
ATOM 7 C4' C A1550 -48.388 -81.356 55.913 1.00 97.60 C
ATOM 8 O4' C A1550 -49.747 -81.037 55.529 1.00 97.41 O
ATOM 9 C3' C A1550 -48.464 -82.271 57.126 1.00 98.28 C
ATOM 10 O3' C A1550 -47.948 -81.662 58.363 1.00 98.23 O
ATOM 11 C2' C A1550 -49.932 -82.730 57.191 1.00 98.54 C
ATOM 12 O2' C A1550 -50.479 -82.844 58.484 1.00 98.89 O
ATOM 13 C1' C A1550 -50.683 -81.697 56.345 1.00 97.91 C
ATOM 14 N1 C A1550 -51.698 -82.301 55.470 1.00 98.07 N
ATOM 15 C2 C A1550 -52.838 -81.600 55.051 1.00 97.73 C
ATOM 16 O2 C A1550 -52.977 -80.416 55.383 1.00 97.26 O
ATOM 17 N3 C A1550 -53.754 -82.247 54.269 1.00 97.95 N
ATOM 18 C4 C A1550 -53.576 -83.528 53.929 1.00 98.47 C
ATOM 19 N4 C A1550 -54.492 -84.101 53.168 1.00 98.67 N
ATOM 20 C5 C A1550 -52.446 -84.275 54.343 1.00 98.83 C
ATOM 21 C6 C A1550 -51.551 -83.623 55.111 1.00 98.62 C
ATOM 22 P A A1551 -48.556 -80.340 59.099 1.00 92.98 P
ATOM 23 OP1 A A1551 -48.186 -80.455 60.532 1.00 93.34 O
ATOM 24 OP2 A A1551 -49.983 -80.237 58.763 1.00 92.90 O
ATOM 25 O5' A A1551 -47.746 -79.123 58.430 1.00 92.25 O
TER
ATOM 1 O3' U B1548 -50.857 -87.844 49.702 1.00103.62 O
ATOM 2 P U B1549 -50.508 -87.382 51.215 1.00 90.47 P
ATOM 3 OP1 U B1549 -49.486 -88.323 51.714 1.00 91.00 O
ATOM 4 OP2 U B1549 -51.772 -87.259 51.962 1.00 90.58 O
ATOM 5 O5' U B1549 -49.864 -85.949 51.008 1.00 89.73 O
ATOM 6 C5' U B1549 -48.602 -85.806 50.381 1.00 89.54 C
ATOM 7 C4' U B1549 -48.179 -84.365 50.330 1.00 88.85 C
ATOM 8 O4' U B1549 -49.123 -83.592 49.545 1.00 88.39 O
ATOM 9 C3' U B1549 -48.150 -83.640 51.655 1.00 88.71 C
ATOM 10 O3' U B1549 -47.010 -83.951 52.422 1.00 88.98 O
ATOM 11 C2' U B1549 -48.222 -82.186 51.231 1.00 87.97 C
ATOM 12 O2' U B1549 -46.956 -81.757 50.752 1.00 87.70 O
ATOM 13 C1' U B1549 -49.187 -82.270 50.043 1.00 87.86 C
ATOM 14 N1 U B1549 -50.591 -81.979 50.431 1.00 87.82 N
ATOM 15 C2 U B1549 -51.032 -80.679 50.535 1.00 87.28 C
ATOM 16 O2 U B1549 -50.347 -79.723 50.326 1.00 86.81 O
ATOM 17 N3 U B1549 -52.324 -80.494 50.901 1.00 87.32 N
ATOM 18 C4 U B1549 -53.249 -81.482 51.155 1.00 87.84 C
ATOM 19 O4 U B1549 -54.401 -81.173 51.472 1.00 87.84 O
ATOM 20 C5 U B1549 -52.742 -82.815 51.009 1.00 88.39 C
ATOM 21 C6 U B1549 -51.466 -83.012 50.666 1.00 88.36 C
ATOM 22 P C B1550 -47.192 -84.446 53.930 1.00 98.71 P
ATOM 23 OP1 C B1550 -45.859 -84.362 54.585 1.00 98.80 O
ATOM 24 OP2 C B1550 -47.873 -85.759 53.878 1.00 99.34 O
ATOM 25 O5' C B1550 -48.174 -83.341 54.534 1.00 98.29 O
TER
ATOM 2 P C A1550 -47.192 -84.446 53.930 1.00 98.71 P
ATOM 3 OP1 C A1550 -45.859 -84.362 54.585 1.00 98.80 O
ATOM 4 OP2 C A1550 -47.873 -85.759 53.878 1.00 99.34 O
ATOM 5 O5' C A1550 -48.174 -83.341 54.534 1.00 98.29 O
ATOM 6 C5' C A1550 -47.729 -81.992 54.724 1.00 97.68 C
ATOM 7 C4' C A1550 -48.388 -81.356 55.913 1.00 97.60 C
ATOM 8 O4' C A1550 -49.747 -81.037 55.529 1.00 97.41 O
ATOM 9 C3' C A1550 -48.464 -82.271 57.126 1.00 98.28 C
ATOM 10 O3' C A1550 -47.948 -81.662 58.363 1.00 98.23 O
ATOM 11 C2' C A1550 -49.932 -82.730 57.191 1.00 98.54 C
ATOM 12 O2' C A1550 -50.479 -82.844 58.484 1.00 98.89 O
ATOM 13 C1' C A1550 -50.683 -81.697 56.345 1.00 97.91 C
ATOM 14 N1 C A1550 -51.698 -82.301 55.470 1.00 98.07 N
ATOM 15 C2 C A1550 -52.838 -81.600 55.051 1.00 97.73 C
ATOM 16 O2 C A1550 -52.977 -80.416 55.383 1.00 97.26 O
ATOM 17 N3 C A1550 -53.754 -82.247 54.269 1.00 97.95 N
ATOM 18 C4 C A1550 -53.576 -83.528 53.929 1.00 98.47 C
ATOM 19 N4 C A1550 -54.492 -84.101 53.168 1.00 98.67 N
ATOM 20 C5 C A1550 -52.446 -84.275 54.343 1.00 98.83 C
ATOM 21 C6 C A1550 -51.551 -83.623 55.111 1.00 98.62 C
ATOM 22 P A A1551 -48.556 -80.340 59.099 1.00 92.98 P
ATOM 23 OP1 A A1551 -48.186 -80.455 60.532 1.00 93.34 O
ATOM 24 OP2 A A1551 -49.983 -80.237 58.763 1.00 92.90 O
ATOM 25 O5' A A1551 -47.746 -79.123 58.430 1.00 92.25 O
TER
ATOM 1 O3' U B1548 -50.857 -87.844 49.702 1.00103.62 O
ATOM 2 P U B1549 -50.508 -87.382 51.215 1.00 90.47 P
ATOM 3 OP1 U B1549 -49.486 -88.323 51.714 1.00 91.00 O
ATOM 4 OP2 U B1549 -51.772 -87.259 51.962 1.00 90.58 O
ATOM 5 O5' U B1549 -49.864 -85.949 51.008 1.00 89.73 O
ATOM 6 C5' U B1549 -48.602 -85.806 50.381 1.00 89.54 C
ATOM 7 C4' U B1549 -48.179 -84.365 50.330 1.00 88.85 C
ATOM 8 O4' U B1549 -49.123 -83.592 49.545 1.00 88.39 O
ATOM 9 C3' U B1549 -48.150 -83.640 51.655 1.00 88.71 C
ATOM 10 O3' U B1549 -47.010 -83.951 52.422 1.00 88.98 O
ATOM 11 C2' U B1549 -48.222 -82.186 51.231 1.00 87.97 C
ATOM 12 O2' U B1549 -46.956 -81.757 50.752 1.00 87.70 O
ATOM 13 C1' U B1549 -49.187 -82.270 50.043 1.00 87.86 C
ATOM 14 N1 U B1549 -50.591 -81.979 50.431 1.00 87.82 N
ATOM 15 C2 U B1549 -51.032 -80.679 50.535 1.00 87.28 C
ATOM 16 O2 U B1549 -50.347 -79.723 50.326 1.00 86.81 O
ATOM 17 N3 U B1549 -52.324 -80.494 50.901 1.00 87.32 N
ATOM 18 C4 U B1549 -53.249 -81.482 51.155 1.00 87.84 C
ATOM 19 O4 U B1549 -54.401 -81.173 51.472 1.00 87.84 O
ATOM 20 C5 U B1549 -52.742 -82.815 51.009 1.00 88.39 C
ATOM 21 C6 U B1549 -51.466 -83.012 50.666 1.00 88.36 C
ATOM 22 P C B1550 -47.192 -84.446 53.930 1.00 98.71 P
ATOM 23 OP1 C B1550 -45.859 -84.362 54.585 1.00 98.80 O
ATOM 24 OP2 C B1550 -47.873 -85.759 53.878 1.00 99.34 O
ATOM 25 O5' C B1550 -48.174 -83.341 54.534 1.00 98.29 O
TER
Atoms:
C2: (-52.838,-81.600,55.051)
OP1: (-45.859,-84.362,54.585)
OP2: (-47.873,-85.759,53.878)
C4: (-53.576,-83.528,53.929)
O5': (-48.174,-83.341,54.534)
C3': (-48.464,-82.271,57.126)
C1': (-50.683,-81.697,56.345)
O4': (-49.747,-81.037,55.529)
C5': (-47.729,-81.992,54.724)
P: (-47.192,-84.446,53.930)
O2: (-52.977,-80.416,55.383)
C4': (-48.388,-81.356,55.913)
C2': (-49.932,-82.730,57.191)
O2': (-50.479,-82.844,58.484)
N1: (-51.698,-82.301,55.470)
N3: (-53.754,-82.247,54.269)
N4: (-54.492,-84.101,53.168)
C6: (-51.551,-83.623,55.111)
C5: (-52.446,-84.275,54.343)
O3': (-47.948,-81.662,58.363)
OP1: (-45.859,-84.362,54.585)
OP2: (-47.873,-85.759,53.878)
C4: (-53.576,-83.528,53.929)
O5': (-48.174,-83.341,54.534)
C3': (-48.464,-82.271,57.126)
C1': (-50.683,-81.697,56.345)
O4': (-49.747,-81.037,55.529)
C5': (-47.729,-81.992,54.724)
P: (-47.192,-84.446,53.930)
O2: (-52.977,-80.416,55.383)
C4': (-48.388,-81.356,55.913)
C2': (-49.932,-82.730,57.191)
O2': (-50.479,-82.844,58.484)
N1: (-51.698,-82.301,55.470)
N3: (-53.754,-82.247,54.269)
N4: (-54.492,-84.101,53.168)
C6: (-51.551,-83.623,55.111)
C5: (-52.446,-84.275,54.343)
O3': (-47.948,-81.662,58.363)
C4: (-53.249,-81.482,51.155)
N3: (-52.324,-80.494,50.901)
OP1: (-49.486,-88.323,51.714)
OP2: (-51.772,-87.259,51.962)
C2: (-51.032,-80.679,50.535)
C1': (-49.187,-82.270,50.043)
C3': (-48.150,-83.640,51.655)
O5': (-49.864,-85.949,51.008)
O4': (-49.123,-83.592,49.545)
C5': (-48.602,-85.806,50.381)
P: (-50.508,-87.382,51.215)
C4': (-48.179,-84.365,50.330)
C2': (-48.222,-82.186,51.231)
O2': (-46.956,-81.757,50.752)
N1: (-50.591,-81.979,50.431)
O4: (-54.401,-81.173,51.472)
O2: (-50.347,-79.723,50.326)
C6: (-51.466,-83.012,50.666)
C5: (-52.742,-82.815,51.009)
O3': (-47.010,-83.951,52.422)
N3: (-52.324,-80.494,50.901)
OP1: (-49.486,-88.323,51.714)
OP2: (-51.772,-87.259,51.962)
C2: (-51.032,-80.679,50.535)
C1': (-49.187,-82.270,50.043)
C3': (-48.150,-83.640,51.655)
O5': (-49.864,-85.949,51.008)
O4': (-49.123,-83.592,49.545)
C5': (-48.602,-85.806,50.381)
P: (-50.508,-87.382,51.215)
C4': (-48.179,-84.365,50.330)
C2': (-48.222,-82.186,51.231)
O2': (-46.956,-81.757,50.752)
N1: (-50.591,-81.979,50.431)
O4: (-54.401,-81.173,51.472)
O2: (-50.347,-79.723,50.326)
C6: (-51.466,-83.012,50.666)
C5: (-52.742,-82.815,51.009)
O3': (-47.010,-83.951,52.422)
Image (generated by PyMOL):