Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2249:2248
Extra
PDB:
ATOM 1 O3' U A 248 -52.672 87.446 96.681 1.00 79.85 O
ATOM 2 P C A 249 -53.595 88.249 95.628 1.00 83.04 P
ATOM 3 OP1 C A 249 -52.723 89.271 94.947 1.00 83.23 O
ATOM 4 OP2 C A 249 -54.791 88.714 96.363 1.00 83.95 O
ATOM 5 O5' C A 249 -54.002 87.120 94.573 1.00 82.34 O
ATOM 6 C5' C A 249 -54.972 86.128 94.885 1.00 82.18 C
ATOM 7 C4' C A 249 -56.102 86.108 93.884 1.00 82.52 C
ATOM 8 O4' C A 249 -57.331 85.786 94.575 1.00 82.96 O
ATOM 9 C3' C A 249 -56.378 87.427 93.156 1.00 83.37 C
ATOM 10 O3' C A 249 -55.642 87.543 91.947 1.00 82.98 O
ATOM 11 C2' C A 249 -57.883 87.406 92.935 1.00 84.01 C
ATOM 12 O2' C A 249 -58.218 86.686 91.763 1.00 83.60 O
ATOM 13 C1' C A 249 -58.377 86.619 94.142 1.00 83.90 C
ATOM 14 N1 C A 249 -58.749 87.496 95.261 1.00 84.77 N
ATOM 15 C2 C A 249 -59.780 88.417 95.137 1.00 85.84 C
ATOM 16 O2 C A 249 -60.375 88.477 94.050 1.00 86.02 O
ATOM 17 N3 C A 249 -60.084 89.216 96.192 1.00 86.65 N
ATOM 18 C4 C A 249 -59.410 89.100 97.330 1.00 86.44 C
ATOM 19 N4 C A 249 -59.719 89.883 98.359 1.00 87.28 N
ATOM 20 C5 C A 249 -58.361 88.165 97.480 1.00 85.37 C
ATOM 21 C6 C A 249 -58.059 87.395 96.431 1.00 84.57 C
ATOM 22 P A A 250 -55.131 88.973 91.409 1.00 85.82 P
ATOM 23 OP1 A A 250 -54.243 88.706 90.267 1.00 85.17 O
ATOM 24 OP2 A A 250 -54.583 89.717 92.569 1.00 86.19 O
ATOM 25 O5' A A 250 -56.469 89.654 90.889 1.00 86.81 O
TER
ATOM 1 O3' U B 247 -56.081 84.347 101.138 1.00 81.51 O
ATOM 2 P U B 248 -55.972 85.936 101.344 1.00 81.22 P
ATOM 3 OP1 U B 248 -55.623 86.174 102.769 1.00 81.56 O
ATOM 4 OP2 U B 248 -57.210 86.538 100.808 1.00 82.00 O
ATOM 5 O5' U B 248 -54.741 86.298 100.420 1.00 80.72 O
ATOM 6 C5' U B 248 -54.695 87.516 99.717 1.00 81.29 C
ATOM 7 C4' U B 248 -53.404 87.650 98.985 1.00 80.70 C
ATOM 8 O4' U B 248 -52.321 87.320 99.900 1.00 80.27 O
ATOM 9 C3' U B 248 -53.253 86.727 97.775 1.00 79.84 C
ATOM 10 O3' U B 248 -52.672 87.446 96.681 1.00 79.85 O
ATOM 11 C2' U B 248 -52.272 85.658 98.272 1.00 78.90 C
ATOM 12 O2' U B 248 -51.472 85.075 97.264 1.00 78.06 O
ATOM 13 C1' U B 248 -51.430 86.442 99.267 1.00 79.26 C
ATOM 14 N1 U B 248 -50.753 85.603 100.293 1.00 78.73 N
ATOM 15 C2 U B 248 -49.468 85.970 100.725 1.00 78.60 C
ATOM 16 O2 U B 248 -48.871 86.969 100.359 1.00 78.91 O
ATOM 17 N3 U B 248 -48.874 85.141 101.646 1.00 78.13 N
ATOM 18 C4 U B 248 -49.407 83.968 102.154 1.00 77.75 C
ATOM 19 O4 U B 248 -48.741 83.310 102.973 1.00 77.37 O
ATOM 20 C5 U B 248 -50.714 83.637 101.647 1.00 77.89 C
ATOM 21 C6 U B 248 -51.322 84.437 100.761 1.00 78.36 C
ATOM 22 P C B 249 -53.595 88.249 95.628 1.00 83.04 P
ATOM 23 OP1 C B 249 -52.723 89.271 94.947 1.00 83.23 O
ATOM 24 OP2 C B 249 -54.791 88.714 96.363 1.00 83.95 O
ATOM 25 O5' C B 249 -54.002 87.120 94.573 1.00 82.34 O
TER
ATOM 2 P C A 249 -53.595 88.249 95.628 1.00 83.04 P
ATOM 3 OP1 C A 249 -52.723 89.271 94.947 1.00 83.23 O
ATOM 4 OP2 C A 249 -54.791 88.714 96.363 1.00 83.95 O
ATOM 5 O5' C A 249 -54.002 87.120 94.573 1.00 82.34 O
ATOM 6 C5' C A 249 -54.972 86.128 94.885 1.00 82.18 C
ATOM 7 C4' C A 249 -56.102 86.108 93.884 1.00 82.52 C
ATOM 8 O4' C A 249 -57.331 85.786 94.575 1.00 82.96 O
ATOM 9 C3' C A 249 -56.378 87.427 93.156 1.00 83.37 C
ATOM 10 O3' C A 249 -55.642 87.543 91.947 1.00 82.98 O
ATOM 11 C2' C A 249 -57.883 87.406 92.935 1.00 84.01 C
ATOM 12 O2' C A 249 -58.218 86.686 91.763 1.00 83.60 O
ATOM 13 C1' C A 249 -58.377 86.619 94.142 1.00 83.90 C
ATOM 14 N1 C A 249 -58.749 87.496 95.261 1.00 84.77 N
ATOM 15 C2 C A 249 -59.780 88.417 95.137 1.00 85.84 C
ATOM 16 O2 C A 249 -60.375 88.477 94.050 1.00 86.02 O
ATOM 17 N3 C A 249 -60.084 89.216 96.192 1.00 86.65 N
ATOM 18 C4 C A 249 -59.410 89.100 97.330 1.00 86.44 C
ATOM 19 N4 C A 249 -59.719 89.883 98.359 1.00 87.28 N
ATOM 20 C5 C A 249 -58.361 88.165 97.480 1.00 85.37 C
ATOM 21 C6 C A 249 -58.059 87.395 96.431 1.00 84.57 C
ATOM 22 P A A 250 -55.131 88.973 91.409 1.00 85.82 P
ATOM 23 OP1 A A 250 -54.243 88.706 90.267 1.00 85.17 O
ATOM 24 OP2 A A 250 -54.583 89.717 92.569 1.00 86.19 O
ATOM 25 O5' A A 250 -56.469 89.654 90.889 1.00 86.81 O
TER
ATOM 1 O3' U B 247 -56.081 84.347 101.138 1.00 81.51 O
ATOM 2 P U B 248 -55.972 85.936 101.344 1.00 81.22 P
ATOM 3 OP1 U B 248 -55.623 86.174 102.769 1.00 81.56 O
ATOM 4 OP2 U B 248 -57.210 86.538 100.808 1.00 82.00 O
ATOM 5 O5' U B 248 -54.741 86.298 100.420 1.00 80.72 O
ATOM 6 C5' U B 248 -54.695 87.516 99.717 1.00 81.29 C
ATOM 7 C4' U B 248 -53.404 87.650 98.985 1.00 80.70 C
ATOM 8 O4' U B 248 -52.321 87.320 99.900 1.00 80.27 O
ATOM 9 C3' U B 248 -53.253 86.727 97.775 1.00 79.84 C
ATOM 10 O3' U B 248 -52.672 87.446 96.681 1.00 79.85 O
ATOM 11 C2' U B 248 -52.272 85.658 98.272 1.00 78.90 C
ATOM 12 O2' U B 248 -51.472 85.075 97.264 1.00 78.06 O
ATOM 13 C1' U B 248 -51.430 86.442 99.267 1.00 79.26 C
ATOM 14 N1 U B 248 -50.753 85.603 100.293 1.00 78.73 N
ATOM 15 C2 U B 248 -49.468 85.970 100.725 1.00 78.60 C
ATOM 16 O2 U B 248 -48.871 86.969 100.359 1.00 78.91 O
ATOM 17 N3 U B 248 -48.874 85.141 101.646 1.00 78.13 N
ATOM 18 C4 U B 248 -49.407 83.968 102.154 1.00 77.75 C
ATOM 19 O4 U B 248 -48.741 83.310 102.973 1.00 77.37 O
ATOM 20 C5 U B 248 -50.714 83.637 101.647 1.00 77.89 C
ATOM 21 C6 U B 248 -51.322 84.437 100.761 1.00 78.36 C
ATOM 22 P C B 249 -53.595 88.249 95.628 1.00 83.04 P
ATOM 23 OP1 C B 249 -52.723 89.271 94.947 1.00 83.23 O
ATOM 24 OP2 C B 249 -54.791 88.714 96.363 1.00 83.95 O
ATOM 25 O5' C B 249 -54.002 87.120 94.573 1.00 82.34 O
TER
Atoms:
C2: (-59.780,88.417,95.137)
OP1: (-52.723,89.271,94.947)
OP2: (-54.791,88.714,96.363)
C4: (-59.410,89.100,97.330)
O5': (-54.002,87.120,94.573)
C3': (-56.378,87.427,93.156)
C1': (-58.377,86.619,94.142)
O4': (-57.331,85.786,94.575)
C5': (-54.972,86.128,94.885)
P: (-53.595,88.249,95.628)
O2: (-60.375,88.477,94.050)
C4': (-56.102,86.108,93.884)
C2': (-57.883,87.406,92.935)
O2': (-58.218,86.686,91.763)
N1: (-58.749,87.496,95.261)
N3: (-60.084,89.216,96.192)
N4: (-59.719,89.883,98.359)
C6: (-58.059,87.395,96.431)
C5: (-58.361,88.165,97.480)
O3': (-55.642,87.543,91.947)
OP1: (-52.723,89.271,94.947)
OP2: (-54.791,88.714,96.363)
C4: (-59.410,89.100,97.330)
O5': (-54.002,87.120,94.573)
C3': (-56.378,87.427,93.156)
C1': (-58.377,86.619,94.142)
O4': (-57.331,85.786,94.575)
C5': (-54.972,86.128,94.885)
P: (-53.595,88.249,95.628)
O2: (-60.375,88.477,94.050)
C4': (-56.102,86.108,93.884)
C2': (-57.883,87.406,92.935)
O2': (-58.218,86.686,91.763)
N1: (-58.749,87.496,95.261)
N3: (-60.084,89.216,96.192)
N4: (-59.719,89.883,98.359)
C6: (-58.059,87.395,96.431)
C5: (-58.361,88.165,97.480)
O3': (-55.642,87.543,91.947)
C4: (-49.407,83.968,102.154)
N3: (-48.874,85.141,101.646)
OP1: (-55.623,86.174,102.769)
OP2: (-57.210,86.538,100.808)
C2: (-49.468,85.970,100.725)
C1': (-51.430,86.442,99.267)
C3': (-53.253,86.727,97.775)
O5': (-54.741,86.298,100.420)
O4': (-52.321,87.320,99.900)
C5': (-54.695,87.516,99.717)
P: (-55.972,85.936,101.344)
C4': (-53.404,87.650,98.985)
C2': (-52.272,85.658,98.272)
O2': (-51.472,85.075,97.264)
N1: (-50.753,85.603,100.293)
O4: (-48.741,83.310,102.973)
O2: (-48.871,86.969,100.359)
C6: (-51.322,84.437,100.761)
C5: (-50.714,83.637,101.647)
O3': (-52.672,87.446,96.681)
N3: (-48.874,85.141,101.646)
OP1: (-55.623,86.174,102.769)
OP2: (-57.210,86.538,100.808)
C2: (-49.468,85.970,100.725)
C1': (-51.430,86.442,99.267)
C3': (-53.253,86.727,97.775)
O5': (-54.741,86.298,100.420)
O4': (-52.321,87.320,99.900)
C5': (-54.695,87.516,99.717)
P: (-55.972,85.936,101.344)
C4': (-53.404,87.650,98.985)
C2': (-52.272,85.658,98.272)
O2': (-51.472,85.075,97.264)
N1: (-50.753,85.603,100.293)
O4: (-48.741,83.310,102.973)
O2: (-48.871,86.969,100.359)
C6: (-51.322,84.437,100.761)
C5: (-50.714,83.637,101.647)
O3': (-52.672,87.446,96.681)
Image (generated by PyMOL):